RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Ankrd60A2AMD2 318 aa10.13□□□□□ -0.79
Pcif1-201ENSMUST00000041643 RhobP62746 196 aa10.13□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Gabra1P62812 455 aa10.13□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Kazald1Q8BJ66 313 aa10.13□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Olfr1370Q8VFG4 316 aa10.13□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Olfr1342Q8VFY3 315 aa10.13□□□□□ -0.79
Pcif1-201ENSMUST00000041643 MmdQ9CQY7 238 aa10.13□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Rhox7bA6PW38 321 aa10.13□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Ssbp4Q3U4B1 363 aa10.13□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Lyplal1Q3UFF7 239 aa10.13□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Gm614Q3V2K1 191 aa10.13□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Patz1Q5NBY9 687 aaKnown RBP10.13□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Olfr1356Q7TQU8 320 aa10.13□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Gm9837Q8C607 126 aa10.13□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Olfr195Q8VGQ6 308 aa10.13□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Ms4a6dQ99N07 247 aa10.13□□□□□ -0.79
Pcif1-201ENSMUST00000041643 SostQ99P68 211 aa10.13□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Tex37Q9DAG4 180 aa10.13□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Gm10439A2AJU2 433 aaKnown RBP10.13□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Gm15114B1B0X6 433 aa10.13□□□□□ -0.79
Pcif1-201ENSMUST00000041643 A930017K11RikE0CXQ2 571 aa10.13□□□□□ -0.79
Pcif1-201ENSMUST00000041643 PtcraP0C6B2 199 aa10.13□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Mmp9P41245 730 aa10.13□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Thsd4Q3UTY6 1018 aa10.13□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Ptrh2Q8R2Y8 181 aaKnown RBP10.13□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Olfr802Q8VGJ2 312 aa10.13□□□□□ -0.79
Pcif1-201ENSMUST00000041643 SdhdQ9CXV1 159 aa10.13□□□□□ -0.79
Pcif1-201ENSMUST00000041643 P01796 113 aa10.13□□□□□ -0.79
Pcif1-201ENSMUST00000041643 P01797 113 aa10.13□□□□□ -0.79
Pcif1-201ENSMUST00000041643 P01799 113 aa10.13□□□□□ -0.79
Pcif1-201ENSMUST00000041643 P06323 132 aa10.13□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Tmem71Q149F5 287 aa10.13□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Spred3Q6P6N5 408 aa10.13□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Mrps10Q80ZK0 160 aaKnown RBP10.13□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Gpr4Q8BUD0 365 aa10.13□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Pomt1Q8R2R1 746 aa10.13□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Zfp959Q91VM8 539 aa10.13□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Arpc1bQ9WV32 372 aaKnown RBP10.13□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Adgrg5Q3V3Z3 524 aa10.12□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Gm2381G3UY53 305 aa10.12□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Phxr2P15972 65 aa10.12□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Mpv17P19258 176 aa10.12□□□□□ -0.79
Pcif1-201ENSMUST00000041643 MgpP19788 104 aa10.12□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Gm11232Q5SPI8 295 aa10.12□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Fstl3Q9EQC7 256 aa10.12□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Gm8653K9J7G2 307 aa10.12□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Vmn1r117L7N2C9 307 aa10.12□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Gfi1bO70237 330 aa10.12□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Slc25a5P51881 298 aaKnown RBP10.12□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Ankrd55Q8BLD6 626 aa10.12□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Slc35e4Q8K3D6 351 aa10.12□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Tppp3Q9CRB6 176 aaKnown RBP10.12□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Chst5Q9QUP4 395 aa10.12□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Loxhd1C8YR32 2068 aa10.12□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Gm12886B1AZM5 119 aa10.12□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Fam219bQ14DQ1 197 aa10.12□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Psmb6Q60692 238 aa10.12□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Tlcd2Q8VC26 310 aa10.12□□□□□ -0.79
Pcif1-201ENSMUST00000041643 AplfQ9D842 499 aa10.12□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Ndufa7Q9Z1P6 113 aaKnown RBP10.12□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Zfp979A2A799 407 aa10.12□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Q9CRC3 126 aa10.12□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Vmn1r128L7N2B4 307 aa10.11□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Nkain3Q3URJ8 181 aa10.11□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Ntf4Q80VU4 209 aa10.11□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Eva1aQ91WM6 156 aa10.11□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Pnrc2Q9CR73 140 aa10.11□□□□□ -0.79
Pcif1-201ENSMUST00000041643 1700013G24RikQ9DAC6 286 aa10.11□□□□□ -0.79
Pcif1-201ENSMUST00000041643 MylkQ6PDN3 1941 aaKnown RBP10.11□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Igkv1-132A0A0B4J1H9 120 aa10.11□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Treml4Q3LRV9 263 aa10.11□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Nfam1Q8R4V1 264 aa10.11□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Olfr632Q9EPN9 317 aa10.11□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Lime1Q9EQR5 269 aa10.11□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Mgst2A2RST1 147 aa10.11□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Esp23A8R0V5 104 aa10.11□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Tmem262D3Z338 116 aa10.11□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Gm21981D3Z6Q6 369 aa10.11□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Zfp36l2P23949 484 aaKnown RBP10.11□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Rab42Q0PD08 215 aa10.11□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Tgfbr1Q64729 503 aa10.11□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Utf1Q6J1H4 339 aa10.11□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Ss18l1Q8BW22 402 aa10.11□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Znrf1Q91V17 227 aa10.11□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Mien1Q9CQ86 115 aa10.11□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Hs3st3b1Q9QZS6 390 aa10.11□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Olfr1214A2ATG3 311 aa10.11□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Npffr1E9Q468 432 aa10.11□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Olfr609E9Q4X7 319 aa10.11□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Gosr1O88630 250 aa10.11□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Cxcl1P12850 96 aa10.11□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Slc25a10Q9QZD8 287 aa10.11□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Cd79bP15530 228 aa10.11□□□□□ -0.79
Pcif1-201ENSMUST00000041643 NdnP25233 325 aa10.11□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Gm20816Q5FWD4 227 aa10.11□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Mex3bQ69Z36 601 aaKnown RBP10.11□□□□□ -0.79
Pcif1-201ENSMUST00000041643 PnkdQ69ZP3 385 aa10.11□□□□□ -0.79
Pcif1-201ENSMUST00000041643 ErasQ7TN89 227 aa10.11□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Q8VCE4 163 aa10.11□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Q9DAZ5 108 aa10.11□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 29.3 ms