RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Mfap5Q9QZJ6 164 aa8.84□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Gm21310J3QQ23 232 aa8.84□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Syngr2O55101 224 aa8.84□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Rpp25Q91WE3 199 aa8.84□□□□□ -0.99
Ubr1-201ENSMUST00000028728 CenpvQ9CXS4 252 aa8.84□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Trav17A0A075B655 113 aa8.84□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Tmem238lA0A1B0GS74 79 aa8.84□□□□□ -0.99
Ubr1-201ENSMUST00000028728 P04212 136 aa8.84□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Defa22Q8C1N8 93 aa8.84□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Vmn1r202Q8R259 302 aa8.84□□□□□ -0.99
Ubr1-201ENSMUST00000028728 UmodQ91X17 642 aa8.84□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Plxnb2B2RXS4 1842 aa8.84□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Olfr978E9Q985 311 aa8.84□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Gnb1P62874 340 aa8.84□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Olfr1339Q8VGB1 315 aa8.84□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Pbp2Q8VIN1 187 aa8.84□□□□□ -0.99
Ubr1-201ENSMUST00000028728 NpffQ9WVA8 114 aa8.84□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Vma21-psA0A140T8R2 101 aa8.84□□□□□ -0.99
Ubr1-201ENSMUST00000028728 D830044I16RikA0A1D5RM53 117 aa8.84□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Rtl6Q505G4 243 aa8.84□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Ifna11Q61716 190 aa8.84□□□□□ -0.99
Ubr1-201ENSMUST00000028728 NmbQ9CR53 121 aa8.84□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Fam219aQ9D772 157 aa8.84□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Olfr926Q9EQ98 308 aa8.84□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Ldlrad1D3YYZ1 218 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 Zfp941Q3URY5 674 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 Rnf122Q8BP31 155 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 Lsm11Q8BUV6 361 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 Itgbl1Q8VDV0 494 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 Olfr559Q8VH14 318 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 Srp19Q9D7A6 144 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 FcrlsQ9EQY5 509 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 Tspan32Q9JHH2 256 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 Bhlha15Q9QYC3 197 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 Lhx9Q9WUH2 397 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 Fcgr4A0A0B4J1G0 249 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 Tex38A2A8T7 201 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 Olfr747E9PXH6 313 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 Olfr749E9Q438 313 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 P01822 137 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 Dnajc30P59041 219 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 Wnt10aP70701 417 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 Htr1dQ61224 374 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 Ndfip1Q8R0W6 221 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 Olfr1242Q8VGM6 306 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 S1pr3Q9Z0U9 378 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 Sfrp4Q9Z1N6 351 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 mt-Co3P00416 261 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 Tmem52bQ0VBF2 186 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 Prss33Q80WM7 277 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 FetubQ9QXC1 388 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 Trav3n-3A0A0G2JEM0 114 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 Trav23A0A0G2JG17 115 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 Olfr1029A2ATE0 324 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 Saa1P05366 122 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 Id4P41139 161 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 Atp5iQ06185 71 aaKnown RBP8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 Vmn1r181Q0P547 304 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 CtrcQ3SYP2 268 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 Klf7Q99JB0 301 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 Pxmp4Q9JJW0 212 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 Ighv1-47A0A0A6YY41 117 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 Col8a1Q00780 744 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 Olfr90Q0VEL5 310 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 Depp1Q8K2F3 205 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 4933402D24RikQ9D4D3 167 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 Rtp3Q5QGU6 474 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 Olfr16Q62007 309 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 Tmem106bQ80X71 275 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 Olfr1408Q8VG32 310 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 H1fooQ8VIK3 304 aa8.83□□□□□ -1
Ubr1-201ENSMUST00000028728 Gm20773A0A0A6YXW2 232 aa8.82□□□□□ -1
Ubr1-201ENSMUST00000028728 Gm20807A0A0A6YXX7 232 aa8.82□□□□□ -1
Ubr1-201ENSMUST00000028728 Lilra6A0A0B4J1F3 663 aa8.82□□□□□ -1
Ubr1-201ENSMUST00000028728 Gm20873J3QMQ9 232 aa8.82□□□□□ -1
Ubr1-201ENSMUST00000028728 Gm20795J3QP49 232 aa8.82□□□□□ -1
Ubr1-201ENSMUST00000028728 Cxcl1P12850 96 aa8.82□□□□□ -1
Ubr1-201ENSMUST00000028728 Mesp1P97309 243 aa8.82□□□□□ -1
Ubr1-201ENSMUST00000028728 Gm21440Q3TTD8 232 aa8.82□□□□□ -1
Ubr1-201ENSMUST00000028728 Cxxc4Q6NXI8 198 aa8.82□□□□□ -1
Ubr1-201ENSMUST00000028728 Arl6ip6Q8BH07 226 aa8.82□□□□□ -1
Ubr1-201ENSMUST00000028728 Tmem11Q8BK08 190 aa8.82□□□□□ -1
Ubr1-201ENSMUST00000028728 Olfr824Q8VFU4 315 aa8.82□□□□□ -1
Ubr1-201ENSMUST00000028728 Olfr1271Q8VG62 305 aa8.82□□□□□ -1
Ubr1-201ENSMUST00000028728 Abhd17aQ99JW1 310 aa8.82□□□□□ -1
Ubr1-201ENSMUST00000028728 Ssmem1Q9D9Y8 244 aa8.82□□□□□ -1
Ubr1-201ENSMUST00000028728 NacaP70670 2187 aaKnown RBP8.82□□□□□ -1
Ubr1-201ENSMUST00000028728 BC025446A0A087WQT1 134 aa8.82□□□□□ -1
Ubr1-201ENSMUST00000028728 Olfr789A0A1L1SV77 312 aa8.82□□□□□ -1
Ubr1-201ENSMUST00000028728 1700015F17RikD3YUK8 150 aa8.82□□□□□ -1
Ubr1-201ENSMUST00000028728 Lyz1P17897 148 aa8.82□□□□□ -1
Ubr1-201ENSMUST00000028728 Ppp1r3cQ7TMB3 317 aa8.82□□□□□ -1
Ubr1-201ENSMUST00000028728 Wipi1Q8R3E3 446 aa8.82□□□□□ -1
Ubr1-201ENSMUST00000028728 Vmn1r232A2RTT5 351 aa8.82□□□□□ -1
Ubr1-201ENSMUST00000028728 Omt2bD3YX29 119 aa8.82□□□□□ -1
Ubr1-201ENSMUST00000028728 Olfr556E9Q549 324 aa8.82□□□□□ -1
Ubr1-201ENSMUST00000028728 Gm5426J3QNM7 103 aa8.82□□□□□ -1
Ubr1-201ENSMUST00000028728 AesP63002 197 aa8.82□□□□□ -1
Ubr1-201ENSMUST00000028728 Q9DAZ5 108 aa8.82□□□□□ -1
Ubr1-201ENSMUST00000028728 Gm42517A0A1Y7VLQ2 374 aa8.82□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 37.7 ms