RNA–Protein interactions for RNA: ENST00000637117.1

CACNA1A-236, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,124 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-236ENST00000637117 SPAG16Q8N0X2 631 aa6.65□□□□□ -1.34
CACNA1A-236ENST00000637117 CENPSQ8N2Z9 138 aa6.65□□□□□ -1.34
CACNA1A-236ENST00000637117 POM121L12Q8N7R1 296 aa6.65□□□□□ -1.34
CACNA1A-236ENST00000637117 GDPD1Q8N9F7 314 aa6.65□□□□□ -1.34
CACNA1A-236ENST00000637117 Q8NAQ8 132 aa6.65□□□□□ -1.34
CACNA1A-236ENST00000637117 UBAC2Q8NBM4 344 aa6.65□□□□□ -1.34
CACNA1A-236ENST00000637117 TMEM116Q8NCL8 245 aa6.65□□□□□ -1.34
CACNA1A-236ENST00000637117 MCFD2Q8NI22 146 aa6.65□□□□□ -1.34
CACNA1A-236ENST00000637117 SCARB1Q8WTV0 552 aa6.65□□□□□ -1.34
CACNA1A-236ENST00000637117 CMTM3Q96MX0 182 aa6.65□□□□□ -1.34
CACNA1A-236ENST00000637117 ATP6V0BQ99437 205 aa6.65□□□□□ -1.34
CACNA1A-236ENST00000637117 QTRT1Q9BXR0 403 aaKnown RBP6.65□□□□□ -1.34
CACNA1A-236ENST00000637117 ATG5Q9H1Y0 275 aa6.65□□□□□ -1.34
CACNA1A-236ENST00000637117 C21orf62Q9NYP8 219 aa6.65□□□□□ -1.34
CACNA1A-236ENST00000637117 DNAH11Q96DT5 4516 aa6.64□□□□□ -1.35
CACNA1A-236ENST00000637117 IFITM5A6NNB3 132 aa6.64□□□□□ -1.35
CACNA1A-236ENST00000637117 HPRT1P00492 218 aa6.64□□□□□ -1.35
CACNA1A-236ENST00000637117 CTSGP08311 255 aa6.64□□□□□ -1.35
CACNA1A-236ENST00000637117 TRAPPC2P0DI81 140 aa6.64□□□□□ -1.35
CACNA1A-236ENST00000637117 TRAPPC2BP0DI82 140 aa6.64□□□□□ -1.35
CACNA1A-236ENST00000637117 NQO2P16083 231 aa6.64□□□□□ -1.35
CACNA1A-236ENST00000637117 PSMA1P25786 263 aaKnown RBP6.64□□□□□ -1.35
CACNA1A-236ENST00000637117 PPP5CP53041 499 aa6.64□□□□□ -1.35
CACNA1A-236ENST00000637117 OR10A3P58181 314 aa6.64□□□□□ -1.35
CACNA1A-236ENST00000637117 TAS2R31P59538 309 aa6.64□□□□□ -1.35
CACNA1A-236ENST00000637117 WT1-ASQ06250 92 aa6.64□□□□□ -1.35
CACNA1A-236ENST00000637117 ANXA2RQ3ZCQ2 193 aa6.64□□□□□ -1.35
CACNA1A-236ENST00000637117 Q56UQ5 140 aa6.64□□□□□ -1.35
CACNA1A-236ENST00000637117 HACD4Q5VWC8 232 aa6.64□□□□□ -1.35
CACNA1A-236ENST00000637117 IGFL4Q6B9Z1 124 aa6.64□□□□□ -1.35
CACNA1A-236ENST00000637117 THOC7Q6I9Y2 204 aaKnown RBP6.64□□□□□ -1.35
CACNA1A-236ENST00000637117 Q6ZTC4 211 aa6.64□□□□□ -1.35
CACNA1A-236ENST00000637117 RNF126Q9BV68 326 aa6.64□□□□□ -1.35
CACNA1A-236ENST00000637117 CCL28Q9NRJ3 127 aa6.64□□□□□ -1.35
CACNA1A-236ENST00000637117 IGHV3OR16-13A0A075B7E8 117 aa6.63□□□□□ -1.35
CACNA1A-236ENST00000637117 TRAV14DV4A0A0A6YYC5 116 aa6.63□□□□□ -1.35
CACNA1A-236ENST00000637117 IGHV3-74A0A0B4J1X5 117 aa6.63□□□□□ -1.35
CACNA1A-236ENST00000637117 IGHV4-28A0A0C4DH34 117 aa6.63□□□□□ -1.35
CACNA1A-236ENST00000637117 LOC100506127A0A0U1RQW1 187 aa6.63□□□□□ -1.35
CACNA1A-236ENST00000637117 TEX50A0A1B0GTY4 177 aa6.63□□□□□ -1.35
CACNA1A-236ENST00000637117 PDCD5O14737 125 aa6.63□□□□□ -1.35
CACNA1A-236ENST00000637117 NUPL2O15504 423 aaKnown RBP6.63□□□□□ -1.35
CACNA1A-236ENST00000637117 RBFOX2O43251 390 aaKnown RBP eCLIP6.63□□□□□ -1.35
CACNA1A-236ENST00000637117 YIF1AO95070 293 aa6.63□□□□□ -1.35
CACNA1A-236ENST00000637117 FGF2P09038 288 aa6.63□□□□□ -1.35
CACNA1A-236ENST00000637117 P0DMU3 169 aa6.63□□□□□ -1.35
CACNA1A-236ENST00000637117 FAM231AP0DMU4 169 aa6.63□□□□□ -1.35
CACNA1A-236ENST00000637117 FAM231CP0DMU5 169 aa6.63□□□□□ -1.35
CACNA1A-236ENST00000637117 DEFB131AP59861 70 aa6.63□□□□□ -1.35
CACNA1A-236ENST00000637117 RELQ04864 619 aaPredicted RBP6.63□□□□□ -1.35
CACNA1A-236ENST00000637117 POU2AF1Q16633 256 aa6.63□□□□□ -1.35
CACNA1A-236ENST00000637117 LGALS9BQ3B8N2 356 aa6.63□□□□□ -1.35
CACNA1A-236ENST00000637117 LEMD1Q68G75 181 aa6.63□□□□□ -1.35
CACNA1A-236ENST00000637117 HSD17B13Q7Z5P4 300 aaPredicted RBP6.63□□□□□ -1.35
CACNA1A-236ENST00000637117 SECTM1Q8WVN6 248 aa6.63□□□□□ -1.35
CACNA1A-236ENST00000637117 ZNF414Q96IQ9 312 aa6.63□□□□□ -1.35
CACNA1A-236ENST00000637117 OR10C1Q96KK4 312 aa6.63□□□□□ -1.35
CACNA1A-236ENST00000637117 ANXA10Q9UJ72 324 aa6.63□□□□□ -1.35
CACNA1A-236ENST00000637117 SSR3Q9UNL2 185 aa6.63□□□□□ -1.35
CACNA1A-236ENST00000637117 F11RQ9Y624 299 aaKnown RBP6.63□□□□□ -1.35
CACNA1A-236ENST00000637117 PKD1P98161 4303 aa6.62□□□□□ -1.35
CACNA1A-236ENST00000637117 K7EIM0 57 aa6.62□□□□□ -1.35
CACNA1A-236ENST00000637117 DNASE2O00115 360 aaPredicted RBP6.62□□□□□ -1.35
CACNA1A-236ENST00000637117 SULT1C2O00338 296 aa6.62□□□□□ -1.35
CACNA1A-236ENST00000637117 DFFBO76075 338 aa6.62□□□□□ -1.35
CACNA1A-236ENST00000637117 CD5P06127 495 aa6.62□□□□□ -1.35
CACNA1A-236ENST00000637117 GIG44P09565 113 aaPredicted RBP6.62□□□□□ -1.35
CACNA1A-236ENST00000637117 MIFP14174 115 aa6.62□□□□□ -1.35
CACNA1A-236ENST00000637117 FCGR2CP31995 323 aa6.62□□□□□ -1.35
CACNA1A-236ENST00000637117 S100A5P33763 92 aa6.62□□□□□ -1.35
CACNA1A-236ENST00000637117 TGFBR1P36897 503 aa6.62□□□□□ -1.35
CACNA1A-236ENST00000637117 OXA1LQ15070 435 aa6.62□□□□□ -1.35
CACNA1A-236ENST00000637117 MSMO1Q15800 293 aa6.62□□□□□ -1.35
CACNA1A-236ENST00000637117 TCF24Q7RTU0 167 aa6.62□□□□□ -1.35
CACNA1A-236ENST00000637117 STHQ8IWL8 128 aa6.62□□□□□ -1.35
CACNA1A-236ENST00000637117 DMBX1Q8NFW5 382 aa6.62□□□□□ -1.35
CACNA1A-236ENST00000637117 OR1L8Q8NGR8 309 aa6.62□□□□□ -1.35
CACNA1A-236ENST00000637117 NUDCD2Q8WVJ2 157 aa6.62□□□□□ -1.35
CACNA1A-236ENST00000637117 HINT2Q9BX68 163 aa6.62□□□□□ -1.35
CACNA1A-236ENST00000637117 NDUFA4L2Q9NRX3 87 aa6.62□□□□□ -1.35
CACNA1A-236ENST00000637117 AGRNO00468 2067 aa6.61□□□□□ -1.35
CACNA1A-236ENST00000637117 DEFB131BA0A096LNP1 70 aa6.61□□□□□ -1.35
CACNA1A-236ENST00000637117 TRAV1-2A0A0B4J238 106 aa6.61□□□□□ -1.35
CACNA1A-236ENST00000637117 TRDV1A0A1B0GX56 115 aa6.61□□□□□ -1.35
CACNA1A-236ENST00000637117 ZNF705EA8MWA4 302 aaPredicted RBP6.61□□□□□ -1.35
CACNA1A-236ENST00000637117 PFDN1O60925 122 aa6.61□□□□□ -1.35
CACNA1A-236ENST00000637117 RAB3BP20337 219 aa6.61□□□□□ -1.35
CACNA1A-236ENST00000637117 FGF9P31371 208 aaPredicted RBP6.61□□□□□ -1.35
CACNA1A-236ENST00000637117 RORCP51449 518 aa6.61□□□□□ -1.35
CACNA1A-236ENST00000637117 CATR1Q13166 79 aa6.61□□□□□ -1.35
CACNA1A-236ENST00000637117 TMEM41BQ5BJD5 291 aa6.61□□□□□ -1.35
CACNA1A-236ENST00000637117 CCDC190Q86UF4 302 aa6.61□□□□□ -1.35
CACNA1A-236ENST00000637117 ZNF575Q86XF7 245 aa6.61□□□□□ -1.35
CACNA1A-236ENST00000637117 DUSP18Q8NEJ0 188 aa6.61□□□□□ -1.35
CACNA1A-236ENST00000637117 GIMAP1Q8WWP7 306 aa6.61□□□□□ -1.35
CACNA1A-236ENST00000637117 LSM10Q969L4 123 aaKnown RBP6.61□□□□□ -1.35
CACNA1A-236ENST00000637117 SLC25A46Q96AG3 418 aa6.61□□□□□ -1.35
CACNA1A-236ENST00000637117 NDUFAF3Q9BU61 184 aa6.61□□□□□ -1.35
CACNA1A-236ENST00000637117 CCDC32Q9BV29 185 aa6.61□□□□□ -1.35
CACNA1A-236ENST00000637117 SLC5A7Q9GZV3 580 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms