RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 PUS1Q9Y606 427 aaKnown RBP eCLIP12.76□□□□□ -0.37
CLN6-212ENST00000636020 RFNGQ9Y644 331 aa12.76□□□□□ -0.37
CLN6-212ENST00000636020 V9GY05 133 aa12.76□□□□□ -0.37
CLN6-212ENST00000636020 ZBTB34Q8NCN2 500 aa12.75□□□□□ -0.37
CLN6-212ENST00000636020 SECTM1Q8WVN6 248 aa12.75□□□□□ -0.37
CLN6-212ENST00000636020 OR51B2Q9Y5P1 312 aa12.75□□□□□ -0.37
CLN6-212ENST00000636020 A0A1W2PS18 150 aa12.74□□□□□ -0.37
CLN6-212ENST00000636020 MT-CO2P00403 227 aa12.74□□□□□ -0.37
CLN6-212ENST00000636020 NPPCP23582 126 aa12.74□□□□□ -0.37
CLN6-212ENST00000636020 PSMG4Q5JS54 123 aa12.74□□□□□ -0.37
CLN6-212ENST00000636020 A0A1B0GU03 582 aa12.73□□□□□ -0.37
CLN6-212ENST00000636020 H3BMM0 161 aa12.73□□□□□ -0.37
CLN6-212ENST00000636020 RAB6AP20340 208 aa12.73□□□□□ -0.37
CLN6-212ENST00000636020 CATR1Q13166 79 aa12.73□□□□□ -0.37
CLN6-212ENST00000636020 ZNF600Q6ZNG1 722 aa12.73□□□□□ -0.37
CLN6-212ENST00000636020 DYNC2LI1Q8TCX1 351 aa12.73□□□□□ -0.37
CLN6-212ENST00000636020 TMEM56Q96MV1 263 aa12.73□□□□□ -0.37
CLN6-212ENST00000636020 COMMD9Q9P000 198 aa12.73□□□□□ -0.37
CLN6-212ENST00000636020 NSG2Q9Y328 171 aa12.73□□□□□ -0.37
CLN6-212ENST00000636020 J3QL48 77 aa12.72□□□□□ -0.37
CLN6-212ENST00000636020 ARL6IP5O75915 188 aa12.72□□□□□ -0.37
CLN6-212ENST00000636020 P2RY1P47900 373 aa12.72□□□□□ -0.37
CLN6-212ENST00000636020 ARL6IP1Q15041 203 aa12.72□□□□□ -0.37
CLN6-212ENST00000636020 CDNFQ49AH0 187 aa12.72□□□□□ -0.37
CLN6-212ENST00000636020 MOB3AQ96BX8 217 aa12.72□□□□□ -0.37
CLN6-212ENST00000636020 PTTG2Q9NZH5 202 aa12.72□□□□□ -0.37
CLN6-212ENST00000636020 ANXA10Q9UJ72 324 aa12.72□□□□□ -0.37
CLN6-212ENST00000636020 IGHV3OR16-12A0A075B7B8 117 aa12.71□□□□□ -0.37
CLN6-212ENST00000636020 METTL21EPA6NDL7 271 aa12.71□□□□□ -0.37
CLN6-212ENST00000636020 HELTA6NFD8 242 aa12.71□□□□□ -0.37
CLN6-212ENST00000636020 MARCH11A6NNE9 402 aa12.71□□□□□ -0.37
CLN6-212ENST00000636020 CRYBB3P26998 211 aa12.71□□□□□ -0.37
CLN6-212ENST00000636020 ERVK-16P61578 105 aa12.71□□□□□ -0.37
CLN6-212ENST00000636020 DHRS2Q13268 280 aa12.71□□□□□ -0.37
CLN6-212ENST00000636020 HACD4Q5VWC8 232 aa12.71□□□□□ -0.37
CLN6-212ENST00000636020 OR51H1Q8NH63 302 aa12.71□□□□□ -0.37
CLN6-212ENST00000636020 ZNF182P17025 639 aaPredicted RBP12.7□□□□□ -0.38
CLN6-212ENST00000636020 CALRP27797 417 aaKnown RBP12.7□□□□□ -0.38
CLN6-212ENST00000636020 GSG1LQ6UXU4 331 aa12.7□□□□□ -0.38
CLN6-212ENST00000636020 CADM3Q8N126 398 aa12.7□□□□□ -0.38
CLN6-212ENST00000636020 NUDCD2Q8WVJ2 157 aa12.7□□□□□ -0.38
CLN6-212ENST00000636020 PINX1Q96BK5 328 aaKnown RBP12.7□□□□□ -0.38
CLN6-212ENST00000636020 MDFICQ9P1T7 246 aa12.7□□□□□ -0.38
CLN6-212ENST00000636020 LINC00588Q9Y4M8 146 aa12.7□□□□□ -0.38
CLN6-212ENST00000636020 TRAV1-2A0A0B4J238 106 aa12.69□□□□□ -0.38
CLN6-212ENST00000636020 DBX1A6NMT0 343 aa12.69□□□□□ -0.38
CLN6-212ENST00000636020 SNAPC5O75971 98 aa12.69□□□□□ -0.38
CLN6-212ENST00000636020 TMEM50AO95807 157 aa12.69□□□□□ -0.38
CLN6-212ENST00000636020 CLEC2LP0C7M8 214 aa12.69□□□□□ -0.38
CLN6-212ENST00000636020 MYL9P24844 172 aa12.69□□□□□ -0.38
CLN6-212ENST00000636020 FCGR2CP31995 323 aa12.69□□□□□ -0.38
CLN6-212ENST00000636020 SDC2P34741 201 aa12.69□□□□□ -0.38
CLN6-212ENST00000636020 RPS19P39019 145 aaKnown RBP12.69□□□□□ -0.38
CLN6-212ENST00000636020 NPBWR1P48145 328 aa12.69□□□□□ -0.38
CLN6-212ENST00000636020 CCL18P55774 89 aa12.69□□□□□ -0.38
CLN6-212ENST00000636020 DAD1P61803 113 aa12.69□□□□□ -0.38
CLN6-212ENST00000636020 METTL26Q96S19 204 aa12.69□□□□□ -0.38
CLN6-212ENST00000636020 KRTAP1-5Q9BYS1 174 aa12.69□□□□□ -0.38
CLN6-212ENST00000636020 SLC5A7Q9GZV3 580 aa12.69□□□□□ -0.38
CLN6-212ENST00000636020 CCDC59Q9P031 241 aaKnown RBP12.69□□□□□ -0.38
CLN6-212ENST00000636020 YTHDF2Q9Y5A9 579 aaKnown RBP12.69□□□□□ -0.38
CLN6-212ENST00000636020 PPYP01298 95 aa12.68□□□□□ -0.38
CLN6-212ENST00000636020 ZNF114Q8NC26 417 aa12.68□□□□□ -0.38
CLN6-212ENST00000636020 ATG5Q9H1Y0 275 aa12.68□□□□□ -0.38
CLN6-212ENST00000636020 FKBP11Q9NYL4 201 aa12.68□□□□□ -0.38
CLN6-212ENST00000636020 PRNDQ9UKY0 176 aa12.68□□□□□ -0.38
CLN6-212ENST00000636020 SSX5O60225 188 aa12.67□□□□□ -0.38
CLN6-212ENST00000636020 KRASP01116 189 aa12.67□□□□□ -0.38
CLN6-212ENST00000636020 PTHLHP12272 177 aa12.67□□□□□ -0.38
CLN6-212ENST00000636020 HLA-DRB4P13762 266 aa12.67□□□□□ -0.38
CLN6-212ENST00000636020 GNRHRP30968 328 aa12.67□□□□□ -0.38
CLN6-212ENST00000636020 PPP5CP53041 499 aa12.67□□□□□ -0.38
CLN6-212ENST00000636020 MXD1Q05195 221 aa12.67□□□□□ -0.38
CLN6-212ENST00000636020 AADACL3Q5VUY0 350 aa12.67□□□□□ -0.38
CLN6-212ENST00000636020 ZNF818PQ6ZRF7 136 aa12.67□□□□□ -0.38
CLN6-212ENST00000636020 TPRA1Q86W33 373 aa12.67□□□□□ -0.38
CLN6-212ENST00000636020 SLIRPQ9GZT3 109 aaKnown RBP12.67□□□□□ -0.38
CLN6-212ENST00000636020 Q9H8V8 135 aa12.67□□□□□ -0.38
CLN6-212ENST00000636020 PGPEP1Q9NXJ5 209 aa12.67□□□□□ -0.38
CLN6-212ENST00000636020 HLA-DRB4X5D2U9 266 aa12.67□□□□□ -0.38
CLN6-212ENST00000636020 LOC102723971A0A1B0GUV8 181 aa12.66□□□□□ -0.38
CLN6-212ENST00000636020 RPS10-NUDT3A0A1W2PQS6 291 aa12.66□□□□□ -0.38
CLN6-212ENST00000636020 SMIM30A4D0T7 59 aa12.66□□□□□ -0.38
CLN6-212ENST00000636020 IFITM5A6NNB3 132 aa12.66□□□□□ -0.38
CLN6-212ENST00000636020 NUDT3O95989 172 aa12.66□□□□□ -0.38
CLN6-212ENST00000636020 G6PCP35575 357 aa12.66□□□□□ -0.38
CLN6-212ENST00000636020 OR10A3P58181 314 aa12.66□□□□□ -0.38
CLN6-212ENST00000636020 FXYD7P58549 80 aa12.66□□□□□ -0.38
CLN6-212ENST00000636020 TMEM235A6NFC5 223 aa12.65□□□□□ -0.38
CLN6-212ENST00000636020 FAM90A26D6RGX4 464 aa12.65□□□□□ -0.38
CLN6-212ENST00000636020 RAB3BP20337 219 aa12.65□□□□□ -0.38
CLN6-212ENST00000636020 EIF2B2P49770 351 aaKnown RBP12.65□□□□□ -0.38
CLN6-212ENST00000636020 ARPC4P59998 168 aa12.65□□□□□ -0.38
CLN6-212ENST00000636020 SNRPD3P62318 126 aaKnown RBP12.65□□□□□ -0.38
CLN6-212ENST00000636020 DLK1P80370 383 aa12.65□□□□□ -0.38
CLN6-212ENST00000636020 TTC32Q5I0X7 151 aa12.65□□□□□ -0.38
CLN6-212ENST00000636020 NARS2Q96I59 477 aaKnown RBP12.65□□□□□ -0.38
CLN6-212ENST00000636020 SEPSECSQ9HD40 501 aaKnown RBP12.65□□□□□ -0.38
CLN6-212ENST00000636020 U3KQE9 123 aa12.65□□□□□ -0.38
CLN6-212ENST00000636020 HBE1P02100 147 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms