RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 FN1P02751 2386 aaKnown RBP1.23□□□□□ -2.21
SMCHD1-209ENST00000583441 RTL1A6NKG5 1358 aa1.23□□□□□ -2.21
SMCHD1-209ENST00000583441 COL4A1P02462 1669 aa1.23□□□□□ -2.21
SMCHD1-209ENST00000583441 IGKV3-7A0A075B6H7 116 aa1.23□□□□□ -2.21
SMCHD1-209ENST00000583441 hCG_1818297A0A087WSY0 165 aa1.23□□□□□ -2.21
SMCHD1-209ENST00000583441 TRAV14DV4A0A0A6YYC5 116 aa1.23□□□□□ -2.21
SMCHD1-209ENST00000583441 A8MT66 165 aa1.23□□□□□ -2.21
SMCHD1-209ENST00000583441 BUB1B-PAK6H3BSN5 160 aa1.23□□□□□ -2.21
SMCHD1-209ENST00000583441 OR7C1O76099 320 aaPredicted RBP1.23□□□□□ -2.21
SMCHD1-209ENST00000583441 ZNF682O95780 498 aa1.23□□□□□ -2.21
SMCHD1-209ENST00000583441 CDC42P60953 191 aa1.23□□□□□ -2.21
SMCHD1-209ENST00000583441 RHEBQ15382 184 aa1.23□□□□□ -2.21
SMCHD1-209ENST00000583441 Q6ZQT0 140 aa1.23□□□□□ -2.21
SMCHD1-209ENST00000583441 C12orf45Q8N5I9 185 aaPredicted RBP1.23□□□□□ -2.21
SMCHD1-209ENST00000583441 SIGLECL1Q8N7X8 197 aa1.23□□□□□ -2.21
SMCHD1-209ENST00000583441 OR5A1Q8NGJ0 315 aa1.23□□□□□ -2.21
SMCHD1-209ENST00000583441 OR51A2Q8NGJ7 313 aa1.23□□□□□ -2.21
SMCHD1-209ENST00000583441 C10orf105Q8TEF2 133 aa1.23□□□□□ -2.21
SMCHD1-209ENST00000583441 KIFC1Q9BW19 673 aa1.23□□□□□ -2.21
SMCHD1-209ENST00000583441 RNF122Q9H9V4 155 aa1.23□□□□□ -2.21
SMCHD1-209ENST00000583441 TVP23BQ9NYZ1 205 aa1.23□□□□□ -2.21
SMCHD1-209ENST00000583441 TOPBP1Q92547 1522 aa1.23□□□□□ -2.21
SMCHD1-209ENST00000583441 ZFYVE9O95405 1425 aa1.23□□□□□ -2.21
SMCHD1-209ENST00000583441 PTPRSQ13332 1948 aa1.23□□□□□ -2.21
SMCHD1-209ENST00000583441 MALRD1Q5VYJ5 2156 aa1.23□□□□□ -2.21
SMCHD1-209ENST00000583441 ROBO3Q96MS0 1386 aa1.22□□□□□ -2.21
SMCHD1-209ENST00000583441 ZFHX2Q9C0A1 2572 aaPredicted RBP1.22□□□□□ -2.21
SMCHD1-209ENST00000583441 OR2J2O76002 312 aa1.22□□□□□ -2.21
SMCHD1-209ENST00000583441 CTSDP07339 412 aaPredicted RBP1.22□□□□□ -2.21
SMCHD1-209ENST00000583441 BAALC-AS2P0C853 105 aa1.22□□□□□ -2.21
SMCHD1-209ENST00000583441 ERVS71-1P61550 626 aa1.22□□□□□ -2.21
SMCHD1-209ENST00000583441 CDK5R1Q15078 307 aa1.22□□□□□ -2.21
SMCHD1-209ENST00000583441 Q6Q795 121 aa1.22□□□□□ -2.21
SMCHD1-209ENST00000583441 CHMP6Q96FZ7 201 aa1.22□□□□□ -2.21
SMCHD1-209ENST00000583441 SIGMAR1Q99720 223 aa1.22□□□□□ -2.21
SMCHD1-209ENST00000583441 PARVBQ9HBI1 364 aa1.22□□□□□ -2.21
SMCHD1-209ENST00000583441 OSTCQ9NRP0 149 aa1.22□□□□□ -2.21
SMCHD1-209ENST00000583441 UQCC1Q9NVA1 299 aa1.22□□□□□ -2.21
SMCHD1-209ENST00000583441 C14orf105Q9NVL8 296 aa1.22□□□□□ -2.21
SMCHD1-209ENST00000583441 IDI2-AS1Q9NZ38 188 aa1.22□□□□□ -2.21
SMCHD1-209ENST00000583441 ARL2BPQ9Y2Y0 163 aa1.22□□□□□ -2.21
SMCHD1-209ENST00000583441 NEO1Q92859 1461 aa1.22□□□□□ -2.21
SMCHD1-209ENST00000583441 SETD5Q9C0A6 1442 aa1.22□□□□□ -2.21
SMCHD1-209ENST00000583441 C7orf71A4D174 169 aa1.21□□□□□ -2.22
SMCHD1-209ENST00000583441 TMEM212A6NML5 194 aa1.21□□□□□ -2.22
SMCHD1-209ENST00000583441 IFNA6P05013 189 aa1.21□□□□□ -2.22
SMCHD1-209ENST00000583441 MIFP14174 115 aa1.21□□□□□ -2.22
SMCHD1-209ENST00000583441 DEFA1P59665 94 aa1.21□□□□□ -2.22
SMCHD1-209ENST00000583441 LIN52Q52LA3 116 aa1.21□□□□□ -2.22
SMCHD1-209ENST00000583441 C10orf55Q5SWW7 151 aa1.21□□□□□ -2.22
SMCHD1-209ENST00000583441 TEX36Q5VZQ5 186 aa1.21□□□□□ -2.22
SMCHD1-209ENST00000583441 Q8N2B8 174 aa1.21□□□□□ -2.22
SMCHD1-209ENST00000583441 OR52L1Q8NGH7 329 aa1.21□□□□□ -2.22
SMCHD1-209ENST00000583441 GNPDA2Q8TDQ7 276 aa1.21□□□□□ -2.22
SMCHD1-209ENST00000583441 ITFG2Q969R8 447 aa1.21□□□□□ -2.22
SMCHD1-209ENST00000583441 RNASE7Q9H1E1 156 aaKnown RBP1.21□□□□□ -2.22
SMCHD1-209ENST00000583441 TRABDQ9H4I3 376 aa1.21□□□□□ -2.22
SMCHD1-209ENST00000583441 TAS2R4Q9NYW5 299 aa1.21□□□□□ -2.22
SMCHD1-209ENST00000583441 EPDR1Q9UM22 224 aa1.21□□□□□ -2.22
SMCHD1-209ENST00000583441 SNURFQ9Y675 71 aa1.21□□□□□ -2.22
SMCHD1-209ENST00000583441 PIK3C2GO75747 1445 aa1.21□□□□□ -2.22
SMCHD1-209ENST00000583441 CPAMD8Q8IZJ3 1885 aa1.2□□□□□ -2.22
SMCHD1-209ENST00000583441 A0A087X0T9 212 aa1.2□□□□□ -2.22
SMCHD1-209ENST00000583441 CRYGAP11844 174 aa1.2□□□□□ -2.22
SMCHD1-209ENST00000583441 SPI1P17947 270 aa1.2□□□□□ -2.22
SMCHD1-209ENST00000583441 FKBP2P26885 142 aaKnown RBP1.2□□□□□ -2.22
SMCHD1-209ENST00000583441 MRPS15P82914 257 aaKnown RBP1.2□□□□□ -2.22
SMCHD1-209ENST00000583441 TMED2Q15363 201 aa1.2□□□□□ -2.22
SMCHD1-209ENST00000583441 LINC01554Q52M75 96 aa1.2□□□□□ -2.22
SMCHD1-209ENST00000583441 OR11H6Q8NGC7 330 aa1.2□□□□□ -2.22
SMCHD1-209ENST00000583441 AQP3Q92482 292 aa1.2□□□□□ -2.22
SMCHD1-209ENST00000583441 RETNLBQ9BQ08 111 aa1.2□□□□□ -2.22
SMCHD1-209ENST00000583441 SLC50A1Q9BRV3 221 aa1.2□□□□□ -2.22
SMCHD1-209ENST00000583441 RALGAPA2Q2PPJ7 1873 aa1.2□□□□□ -2.22
SMCHD1-209ENST00000583441 RTTNQ86VV8 2226 aa1.19□□□□□ -2.22
SMCHD1-209ENST00000583441 OR4E1P0C645 316 aa1.19□□□□□ -2.22
SMCHD1-209ENST00000583441 LYNX1P0DP58 116 aa1.19□□□□□ -2.22
SMCHD1-209ENST00000583441 LYRM7Q5U5X0 104 aa1.19□□□□□ -2.22
SMCHD1-209ENST00000583441 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.19□□□□□ -2.22
SMCHD1-209ENST00000583441 LCA10Q71F78 164 aa1.19□□□□□ -2.22
SMCHD1-209ENST00000583441 SLC25A40Q8TBP6 338 aa1.19□□□□□ -2.22
SMCHD1-209ENST00000583441 FAM172AQ8WUF8 416 aa1.19□□□□□ -2.22
SMCHD1-209ENST00000583441 REG4Q9BYZ8 158 aa1.19□□□□□ -2.22
SMCHD1-209ENST00000583441 SLC35A3Q9Y2D2 325 aa1.19□□□□□ -2.22
SMCHD1-209ENST00000583441 GLI3P10071 1580 aa1.18□□□□□ -2.22
SMCHD1-209ENST00000583441 PTPRBP23467 1997 aa1.18□□□□□ -2.22
SMCHD1-209ENST00000583441 CCDC144AA2RUR9 1427 aa1.18□□□□□ -2.22
SMCHD1-209ENST00000583441 IGKV1D-42A0A075B6H8 117 aa1.18□□□□□ -2.22
SMCHD1-209ENST00000583441 OR2T1O43869 369 aa1.18□□□□□ -2.22
SMCHD1-209ENST00000583441 ATP5HO75947 161 aa1.18□□□□□ -2.22
SMCHD1-209ENST00000583441 PROSCO94903 275 aa1.18□□□□□ -2.22
SMCHD1-209ENST00000583441 CST2P09228 141 aa1.18□□□□□ -2.22
SMCHD1-209ENST00000583441 ASAH2BP0C7U1 165 aa1.18□□□□□ -2.22
SMCHD1-209ENST00000583441 SMIM17P0DL12 118 aa1.18□□□□□ -2.22
SMCHD1-209ENST00000583441 HSD11B1P28845 292 aa1.18□□□□□ -2.22
SMCHD1-209ENST00000583441 ERP29P30040 261 aaKnown RBP1.18□□□□□ -2.22
SMCHD1-209ENST00000583441 BRS3P32247 399 aa1.18□□□□□ -2.22
SMCHD1-209ENST00000583441 OR8D4Q8NGM9 314 aa1.18□□□□□ -2.22
SMCHD1-209ENST00000583441 OR13D1Q8NGV5 346 aa1.18□□□□□ -2.22
SMCHD1-209ENST00000583441 OR4C6Q8NH72 309 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms