RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 MOB4Q9Y3A3 225 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 LSM4Q9Y4Z0 139 aaKnown RBP4.85□□□□□ -1.63
CYLD-216ENST00000569891 PUS1Q9Y606 427 aaKnown RBP eCLIP4.85□□□□□ -1.63
CYLD-216ENST00000569891 IGHV1-69DA0A0B4J2H0 117 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 IGHV1-69P01742 117 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 STAG3L2P0CL84 134 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 STAG3L3P0CL85 134 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 BMI1P35226 326 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 MIC13Q5XKP0 118 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.85□□□□□ -1.63
CYLD-216ENST00000569891 THAP8Q8NA92 274 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 ANAPC16Q96DE5 110 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 TMEM231Q9H6L2 316 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 TUBA4BQ9H853 241 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 ATRXP46100 2492 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 SRRM4A7MD48 611 aaKnown RBP4.85□□□□□ -1.63
CYLD-216ENST00000569891 C11orf94C9JXX5 98 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 GNG7O60262 68 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 HLA-DRB1P01911 266 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 OR5G3P0C626 314 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 LINC00869P0C866 280 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 RAB5BP61020 215 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 BTN1A1Q13410 526 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 PRSS57Q6UWY2 283 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 Q8N7P7 452 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 SSMEM1Q8WWF3 244 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 MLXQ9UH92 298 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 ARID1AO14497 2285 aa4.84□□□□□ -1.63
CYLD-216ENST00000569891 A0A087WWC5 75 aa4.84□□□□□ -1.63
CYLD-216ENST00000569891 LY6HO94772 140 aa4.84□□□□□ -1.63
CYLD-216ENST00000569891 SRP19P09132 144 aaKnown RBP4.84□□□□□ -1.63
CYLD-216ENST00000569891 RND2P52198 227 aa4.84□□□□□ -1.63
CYLD-216ENST00000569891 LINC00205P59089 165 aa4.84□□□□□ -1.63
CYLD-216ENST00000569891 PAX8Q06710 450 aa4.84□□□□□ -1.63
CYLD-216ENST00000569891 AKIRIN2Q53H80 203 aa4.84□□□□□ -1.63
CYLD-216ENST00000569891 ZNF295-AS1Q8N0V1 137 aa4.84□□□□□ -1.63
CYLD-216ENST00000569891 OR4X1Q8NH49 305 aa4.84□□□□□ -1.63
CYLD-216ENST00000569891 OR5R1Q8NH85 324 aa4.84□□□□□ -1.63
CYLD-216ENST00000569891 IGFBPL1Q8WX77 278 aa4.84□□□□□ -1.63
CYLD-216ENST00000569891 MGST2Q99735 147 aa4.84□□□□□ -1.63
CYLD-216ENST00000569891 C7orf69Q9H7B7 122 aa4.84□□□□□ -1.63
CYLD-216ENST00000569891 HIGD1AQ9Y241 93 aa4.84□□□□□ -1.63
CYLD-216ENST00000569891 TSPAN4O14817 238 aa4.84□□□□□ -1.63
CYLD-216ENST00000569891 GAMTQ14353 236 aa4.84□□□□□ -1.63
CYLD-216ENST00000569891 SPSB3Q6PJ21 355 aa4.84□□□□□ -1.63
CYLD-216ENST00000569891 IGF2RP11717 2491 aa4.84□□□□□ -1.63
CYLD-216ENST00000569891 MDFIC2A0A1B0GVS7 189 aa4.84□□□□□ -1.63
CYLD-216ENST00000569891 CRYGBP07316 175 aa4.84□□□□□ -1.63
CYLD-216ENST00000569891 MDKP21741 143 aaPredicted RBP4.84□□□□□ -1.63
CYLD-216ENST00000569891 ARSJQ5FYB0 599 aaPredicted RBP4.84□□□□□ -1.63
CYLD-216ENST00000569891 RPP25LQ8N5L8 163 aaKnown RBP4.84□□□□□ -1.63
CYLD-216ENST00000569891 TMEM116Q8NCL8 245 aa4.84□□□□□ -1.63
CYLD-216ENST00000569891 OR4F17Q8NGA8 305 aa4.84□□□□□ -1.63
CYLD-216ENST00000569891 OR51G1Q8NGK1 321 aa4.84□□□□□ -1.63
CYLD-216ENST00000569891 NPIPB3Q92617 1050 aa4.84□□□□□ -1.63
CYLD-216ENST00000569891 RBM14Q96PK6 669 aaKnown RBP4.84□□□□□ -1.63
CYLD-216ENST00000569891 DSCAML1Q8TD84 2053 aa4.84□□□□□ -1.63
CYLD-216ENST00000569891 A0A1W2PRE2 83 aa4.84□□□□□ -1.64
CYLD-216ENST00000569891 NUPL2O15504 423 aaKnown RBP4.84□□□□□ -1.64
CYLD-216ENST00000569891 GCHFRP30047 84 aa4.84□□□□□ -1.64
CYLD-216ENST00000569891 SAA4P35542 130 aa4.84□□□□□ -1.64
CYLD-216ENST00000569891 SPNS3Q6ZMD2 512 aa4.84□□□□□ -1.64
CYLD-216ENST00000569891 VN1R17PQ8TDU5 208 aa4.84□□□□□ -1.64
CYLD-216ENST00000569891 ZNF48Q96MX3 618 aaPredicted RBP4.84□□□□□ -1.64
CYLD-216ENST00000569891 WNT10AQ9GZT5 417 aa4.84□□□□□ -1.64
CYLD-216ENST00000569891 SACSQ9NZJ4 4579 aa4.83□□□□□ -1.64
CYLD-216ENST00000569891 TPRP12270 2363 aaKnown RBP4.83□□□□□ -1.64
CYLD-216ENST00000569891 FBLL1A6NHQ2 334 aaKnown RBP4.83□□□□□ -1.64
CYLD-216ENST00000569891 FAM74A7A6NL05 159 aa4.83□□□□□ -1.64
CYLD-216ENST00000569891 C1orf196B1AJZ1 125 aa4.83□□□□□ -1.64
CYLD-216ENST00000569891 CLDN34H7C241 214 aa4.83□□□□□ -1.64
CYLD-216ENST00000569891 PAX6P26367 422 aa4.83□□□□□ -1.64
CYLD-216ENST00000569891 MEOX2P50222 304 aa4.83□□□□□ -1.64
CYLD-216ENST00000569891 CNN1P51911 297 aaKnown RBP4.83□□□□□ -1.64
CYLD-216ENST00000569891 ICAM4Q14773 271 aa4.83□□□□□ -1.64
CYLD-216ENST00000569891 Q56UQ5 140 aa4.83□□□□□ -1.64
CYLD-216ENST00000569891 USF3Q68DE3 2245 aa4.83□□□□□ -1.64
CYLD-216ENST00000569891 FAT3Q8TDW7 4589 aa4.83□□□□□ -1.64
CYLD-216ENST00000569891 IGLC7A0M8Q6 106 aa4.83□□□□□ -1.64
CYLD-216ENST00000569891 PRSS46E5RG02 174 aa4.83□□□□□ -1.64
CYLD-216ENST00000569891 H3BQ15 152 aa4.83□□□□□ -1.64
CYLD-216ENST00000569891 H3BUA1 57 aa4.83□□□□□ -1.64
CYLD-216ENST00000569891 AREGP15514 252 aa4.83□□□□□ -1.64
CYLD-216ENST00000569891 HNF1AP20823 631 aa4.83□□□□□ -1.64
CYLD-216ENST00000569891 UBE2L3P68036 154 aaKnown RBP4.83□□□□□ -1.64
CYLD-216ENST00000569891 PRR20EP86478 221 aa4.83□□□□□ -1.64
CYLD-216ENST00000569891 PRR20CP86479 221 aa4.83□□□□□ -1.64
CYLD-216ENST00000569891 PRR20DP86480 221 aa4.83□□□□□ -1.64
CYLD-216ENST00000569891 PRR20BP86481 221 aa4.83□□□□□ -1.64
CYLD-216ENST00000569891 PRR20AP86496 221 aa4.83□□□□□ -1.64
CYLD-216ENST00000569891 LOXL1Q08397 574 aaPredicted RBP4.83□□□□□ -1.64
CYLD-216ENST00000569891 EEF1AKMT3Q96AZ1 226 aa4.83□□□□□ -1.64
CYLD-216ENST00000569891 TMUB1Q9BVT8 246 aa4.83□□□□□ -1.64
CYLD-216ENST00000569891 ZNF355PQ9NSJ1 428 aa4.83□□□□□ -1.64
CYLD-216ENST00000569891 TMEM242Q9NWH2 141 aa4.83□□□□□ -1.64
CYLD-216ENST00000569891 PKDREJQ9NTG1 2253 aa4.83□□□□□ -1.64
CYLD-216ENST00000569891 VWC2LB2RUY7 222 aa4.83□□□□□ -1.64
CYLD-216ENST00000569891 PAGE4O60829 102 aa4.83□□□□□ -1.64
CYLD-216ENST00000569891 RD3LP0DJH9 198 aa4.83□□□□□ -1.64
CYLD-216ENST00000569891 FGF8P55075 233 aaPredicted RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms