RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 SHROOM2Q13796 1616 aa3.14□□□□□ -1.91
SKP1-211ENST00000523359 ARHGAP35Q9NRY4 1499 aa3.14□□□□□ -1.91
SKP1-211ENST00000523359 ZNF638Q14966 1978 aaKnown RBP3.14□□□□□ -1.91
SKP1-211ENST00000523359 CUL7Q14999 1698 aa3.14□□□□□ -1.91
SKP1-211ENST00000523359 HMGXB3Q12766 1538 aa3.14□□□□□ -1.91
SKP1-211ENST00000523359 SAMD9Q5K651 1589 aa3.13□□□□□ -1.91
SKP1-211ENST00000523359 AKAP11Q9UKA4 1901 aa3.13□□□□□ -1.91
SKP1-211ENST00000523359 KDM6AO15550 1401 aaPredicted RBP3.13□□□□□ -1.91
SKP1-211ENST00000523359 TRBV20OR9-2A0A075B6H5 130 aa3.13□□□□□ -1.91
SKP1-211ENST00000523359 TRAV9-1A0A075B6T8 112 aa3.13□□□□□ -1.91
SKP1-211ENST00000523359 IGHV3OR15-7A0A075B7D8 119 aa3.13□□□□□ -1.91
SKP1-211ENST00000523359 LOC102724200A0A096LPH7 203 aaPredicted RBP3.13□□□□□ -1.91
SKP1-211ENST00000523359 TRAV19A0A0A6YYK7 116 aa3.13□□□□□ -1.91
SKP1-211ENST00000523359 IGKV1D-43A0A0B4J1Z2 117 aa3.13□□□□□ -1.91
SKP1-211ENST00000523359 TRAV41A0A0B4J266 112 aa3.13□□□□□ -1.91
SKP1-211ENST00000523359 LOC107984640A0A0U1RRK4 108 aa3.13□□□□□ -1.91
SKP1-211ENST00000523359 H0YJW9 148 aa3.13□□□□□ -1.91
SKP1-211ENST00000523359 NPFFO15130 113 aa3.13□□□□□ -1.91
SKP1-211ENST00000523359 HLA-DQB1P01920 261 aa3.13□□□□□ -1.91
SKP1-211ENST00000523359 PAEPP09466 180 aa3.13□□□□□ -1.91
SKP1-211ENST00000523359 IGLC6P0CF74 106 aa3.13□□□□□ -1.91
SKP1-211ENST00000523359 CASP1P29466 404 aa3.13□□□□□ -1.91
SKP1-211ENST00000523359 ZNF83P51522 516 aa3.13□□□□□ -1.91
SKP1-211ENST00000523359 NDUFA6P56556 154 aa3.13□□□□□ -1.91
SKP1-211ENST00000523359 RHOGP84095 191 aa3.13□□□□□ -1.91
SKP1-211ENST00000523359 RRN3P1Q2M238 152 aa3.13□□□□□ -1.91
SKP1-211ENST00000523359 VMA21Q3ZAQ7 101 aa3.13□□□□□ -1.91
SKP1-211ENST00000523359 LDLRAD2Q5SZI1 272 aa3.13□□□□□ -1.91
SKP1-211ENST00000523359 C1orf140Q5VVS0 124 aa3.13□□□□□ -1.91
SKP1-211ENST00000523359 LCA10Q71F78 164 aa3.13□□□□□ -1.91
SKP1-211ENST00000523359 RPP25LQ8N5L8 163 aaKnown RBP3.13□□□□□ -1.91
SKP1-211ENST00000523359 ZNF645Q8N7E2 425 aa3.13□□□□□ -1.91
SKP1-211ENST00000523359 OR4S1Q8NGB4 309 aa3.13□□□□□ -1.91
SKP1-211ENST00000523359 BORCS8Q96FH0 119 aa3.13□□□□□ -1.91
SKP1-211ENST00000523359 HDHD3Q9BSH5 251 aaPredicted RBP3.13□□□□□ -1.91
SKP1-211ENST00000523359 NKX6-2Q9C056 277 aaPredicted RBP3.13□□□□□ -1.91
SKP1-211ENST00000523359 TUBA4BQ9H853 241 aa3.13□□□□□ -1.91
SKP1-211ENST00000523359 SCN3BQ9NY72 215 aa3.13□□□□□ -1.91
SKP1-211ENST00000523359 BOKQ9UMX3 212 aaPredicted RBP3.13□□□□□ -1.91
SKP1-211ENST00000523359 ATAD5Q96QE3 1844 aa3.13□□□□□ -1.91
SKP1-211ENST00000523359 ADGRL2O95490 1459 aa3.13□□□□□ -1.91
SKP1-211ENST00000523359 MAGI1Q96QZ7 1491 aaPredicted RBP3.13□□□□□ -1.91
SKP1-211ENST00000523359 SHANK2Q9UPX8 1470 aa3.13□□□□□ -1.91
SKP1-211ENST00000523359 PHIPQ8WWQ0 1821 aa3.12□□□□□ -1.91
SKP1-211ENST00000523359 PPRC1Q5VV67 1664 aaKnown RBP3.12□□□□□ -1.91
SKP1-211ENST00000523359 QRICH2Q9H0J4 1663 aa3.12□□□□□ -1.91
SKP1-211ENST00000523359 PZPP20742 1482 aa3.12□□□□□ -1.91
SKP1-211ENST00000523359 CCDC18Q5T9S5 1454 aa3.12□□□□□ -1.91
SKP1-211ENST00000523359 NRXN1Q9ULB1 1477 aa3.12□□□□□ -1.91
SKP1-211ENST00000523359 IGLV1-50A0A075B6I6 118 aa3.12□□□□□ -1.91
SKP1-211ENST00000523359 IGHV1OR15-9A0A0B4J2B8 117 aa3.12□□□□□ -1.91
SKP1-211ENST00000523359 GGT3PA6NGU5 568 aa3.12□□□□□ -1.91
SKP1-211ENST00000523359 GGTLC3B5MD39 225 aa3.12□□□□□ -1.91
SKP1-211ENST00000523359 ZNF73O43830 326 aaPredicted RBP3.12□□□□□ -1.91
SKP1-211ENST00000523359 GABARAPO95166 117 aa3.12□□□□□ -1.91
SKP1-211ENST00000523359 IGKV1-5P01602 117 aa3.12□□□□□ -1.91
SKP1-211ENST00000523359 IGHV3-11P01762 117 aa3.12□□□□□ -1.91
SKP1-211ENST00000523359 CD7P09564 240 aa3.12□□□□□ -1.91
SKP1-211ENST00000523359 PSMB8P28062 276 aa3.12□□□□□ -1.91
SKP1-211ENST00000523359 GNG4P50150 75 aa3.12□□□□□ -1.91
SKP1-211ENST00000523359 INSL3P51460 131 aa3.12□□□□□ -1.91
SKP1-211ENST00000523359 CRISP3P54108 245 aa3.12□□□□□ -1.91
SKP1-211ENST00000523359 TMBIM6P55061 237 aa3.12□□□□□ -1.91
SKP1-211ENST00000523359 COPZ1P61923 177 aa3.12□□□□□ -1.91
SKP1-211ENST00000523359 PDGFRLQ15198 375 aa3.12□□□□□ -1.91
SKP1-211ENST00000523359 C9orf62Q8N4C0 152 aa3.12□□□□□ -1.91
SKP1-211ENST00000523359 OR5A2Q8NGI9 324 aa3.12□□□□□ -1.91
SKP1-211ENST00000523359 C15orf40Q8WUR7 153 aa3.12□□□□□ -1.91
SKP1-211ENST00000523359 PP6455Q8WZ26 134 aa3.12□□□□□ -1.91
SKP1-211ENST00000523359 B9D2Q9BPU9 175 aa3.12□□□□□ -1.91
SKP1-211ENST00000523359 LHX9Q9NQ69 397 aa3.12□□□□□ -1.91
SKP1-211ENST00000523359 TP73-AS1Q9UF72 201 aa3.12□□□□□ -1.91
SKP1-211ENST00000523359 EPRSP07814 1512 aaKnown RBP3.12□□□□□ -1.91
SKP1-211ENST00000523359 TOP2AP11388 1531 aaKnown RBP3.12□□□□□ -1.91
SKP1-211ENST00000523359 CDK13Q14004 1512 aaKnown RBP3.12□□□□□ -1.91
SKP1-211ENST00000523359 SYNJ1O43426 1573 aa3.12□□□□□ -1.91
SKP1-211ENST00000523359 CARMIL3Q8ND23 1372 aa3.12□□□□□ -1.91
SKP1-211ENST00000523359 KDM5AP29375 1690 aaKnown RBP3.11□□□□□ -1.91
SKP1-211ENST00000523359 NCKAP5O14513 1909 aa3.11□□□□□ -1.91
SKP1-211ENST00000523359 A2ML1A8K2U0 1454 aa3.11□□□□□ -1.91
SKP1-211ENST00000523359 NKTRP30414 1462 aaKnown RBP3.11□□□□□ -1.91
SKP1-211ENST00000523359 MYOM2P54296 1465 aa3.11□□□□□ -1.91
SKP1-211ENST00000523359 DOCK4Q8N1I0 1966 aa3.11□□□□□ -1.91
SKP1-211ENST00000523359 LMTK2Q8IWU2 1503 aa3.11□□□□□ -1.91
SKP1-211ENST00000523359 IGKV1-12A0A0C4DH73 117 aa3.11□□□□□ -1.91
SKP1-211ENST00000523359 IGHV3-64DA0A0J9YX35 117 aa3.11□□□□□ -1.91
SKP1-211ENST00000523359 SPAARA0A1B0GVQ0 90 aa3.11□□□□□ -1.91
SKP1-211ENST00000523359 A0A1B0GW54 56 aa3.11□□□□□ -1.91
SKP1-211ENST00000523359 A8MWP6 167 aa3.11□□□□□ -1.91
SKP1-211ENST00000523359 C9JCJ5 164 aa3.11□□□□□ -1.91
SKP1-211ENST00000523359 PLA2G10O15496 165 aa3.11□□□□□ -1.91
SKP1-211ENST00000523359 IGKV1D-12P01611 117 aa3.11□□□□□ -1.91
SKP1-211ENST00000523359 SRP19P09132 144 aaKnown RBP3.11□□□□□ -1.91
SKP1-211ENST00000523359 LINC00869P0C866 280 aa3.11□□□□□ -1.91
SKP1-211ENST00000523359 ZNF80P51504 273 aaPredicted RBP3.11□□□□□ -1.91
SKP1-211ENST00000523359 GNG11P61952 73 aa3.11□□□□□ -1.91
SKP1-211ENST00000523359 BTG2P78543 158 aa3.11□□□□□ -1.91
SKP1-211ENST00000523359 LYRM7Q5U5X0 104 aa3.11□□□□□ -1.91
SKP1-211ENST00000523359 LINC00299Q6ZSB3 139 aa3.11□□□□□ -1.91
SKP1-211ENST00000523359 KRTAP5-5Q701N2 237 aaPredicted RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms