RNA–Protein interactions for RNA: ENST00000488033.5

HCLS1-209, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 4

Gene HCLS1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-209ENST00000488033 BEST4Q8NFU0 473 aa9.46□□□□□ -0.9
HCLS1-209ENST00000488033 FCAMRQ8WWV6 532 aa9.46□□□□□ -0.9
HCLS1-209ENST00000488033 TMEM230Q96A57 120 aa9.46□□□□□ -0.9
HCLS1-209ENST00000488033 YTHDF2Q9Y5A9 579 aaKnown RBP9.46□□□□□ -0.9
HCLS1-209ENST00000488033 IGKV3-20P01619 116 aa9.45□□□□□ -0.9
HCLS1-209ENST00000488033 RLN1P04808 185 aa9.45□□□□□ -0.9
HCLS1-209ENST00000488033 CCL18P55774 89 aa9.45□□□□□ -0.9
HCLS1-209ENST00000488033 ERHP84090 104 aaKnown RBP9.45□□□□□ -0.9
HCLS1-209ENST00000488033 OGFRL1Q5TC84 451 aaPredicted RBP9.45□□□□□ -0.9
HCLS1-209ENST00000488033 CADM3Q8N126 398 aa9.45□□□□□ -0.9
HCLS1-209ENST00000488033 TSC22D3Q99576 134 aa9.45□□□□□ -0.9
HCLS1-209ENST00000488033 ACOT13Q9NPJ3 140 aa9.45□□□□□ -0.9
HCLS1-209ENST00000488033 LOC102723971A0A1B0GUV8 181 aa9.44□□□□□ -0.9
HCLS1-209ENST00000488033 J3QL48 77 aa9.44□□□□□ -0.9
HCLS1-209ENST00000488033 HLA-DRB4P13762 266 aa9.44□□□□□ -0.9
HCLS1-209ENST00000488033 RAB3BP20337 219 aa9.44□□□□□ -0.9
HCLS1-209ENST00000488033 AP2S1P53680 142 aaPredicted RBP9.44□□□□□ -0.9
HCLS1-209ENST00000488033 DLK1P80370 383 aa9.44□□□□□ -0.9
HCLS1-209ENST00000488033 LINC00588Q9Y4M8 146 aa9.44□□□□□ -0.9
HCLS1-209ENST00000488033 HLA-DRB4X5D2U9 266 aa9.44□□□□□ -0.9
HCLS1-209ENST00000488033 TRAV1-2A0A0B4J238 106 aa9.43□□□□□ -0.9
HCLS1-209ENST00000488033 FAM90A26D6RGX4 464 aa9.43□□□□□ -0.9
HCLS1-209ENST00000488033 PGLYRP1O75594 196 aaPredicted RBP9.43□□□□□ -0.9
HCLS1-209ENST00000488033 HBE1P02100 147 aa9.43□□□□□ -0.9
HCLS1-209ENST00000488033 FCER2P06734 321 aa9.43□□□□□ -0.9
HCLS1-209ENST00000488033 BTF3P20290 206 aaKnown RBP9.43□□□□□ -0.9
HCLS1-209ENST00000488033 MYL9P24844 172 aa9.43□□□□□ -0.9
HCLS1-209ENST00000488033 GNRHRP30968 328 aa9.43□□□□□ -0.9
HCLS1-209ENST00000488033 XGP55808 180 aa9.43□□□□□ -0.9
HCLS1-209ENST00000488033 HERV-K104P61576 105 aa9.43□□□□□ -0.9
HCLS1-209ENST00000488033 MLLT11Q13015 90 aaPredicted RBP9.43□□□□□ -0.9
HCLS1-209ENST00000488033 OR4A16Q8NH70 328 aa9.43□□□□□ -0.9
HCLS1-209ENST00000488033 LGALS14Q8TCE9 139 aa9.43□□□□□ -0.9
HCLS1-209ENST00000488033 BORCS5Q969J3 196 aa9.43□□□□□ -0.9
HCLS1-209ENST00000488033 C7orf50Q9BRJ6 194 aaKnown RBP9.43□□□□□ -0.9
HCLS1-209ENST00000488033 PTTG2Q9NZH5 202 aa9.43□□□□□ -0.9
HCLS1-209ENST00000488033 SCGNO76038 276 aa9.42□□□□□ -0.9
HCLS1-209ENST00000488033 PRCDQ00LT1 54 aa9.42□□□□□ -0.9
HCLS1-209ENST00000488033 C16orf54Q6UWD8 224 aa9.42□□□□□ -0.9
HCLS1-209ENST00000488033 HOGA1Q86XE5 327 aa9.42□□□□□ -0.9
HCLS1-209ENST00000488033 PACRGLQ8N7B6 248 aa9.42□□□□□ -0.9
HCLS1-209ENST00000488033 GLMPQ8WWB7 406 aa9.42□□□□□ -0.9
HCLS1-209ENST00000488033 Q9H8V8 135 aa9.42□□□□□ -0.9
HCLS1-209ENST00000488033 SCN3BQ9NY72 215 aa9.42□□□□□ -0.9
HCLS1-209ENST00000488033 GOLT1BQ9Y3E0 138 aa9.42□□□□□ -0.9
HCLS1-209ENST00000488033 SMIM30A4D0T7 59 aa9.41□□□□□ -0.9
HCLS1-209ENST00000488033 CLN5O75503 358 aa9.41□□□□□ -0.9
HCLS1-209ENST00000488033 HOXA1P49639 335 aaPredicted RBP9.41□□□□□ -0.9
HCLS1-209ENST00000488033 RRN3P1Q2M238 152 aa9.41□□□□□ -0.9
HCLS1-209ENST00000488033 GDF5OSQ5U4N7 250 aa9.41□□□□□ -0.9
HCLS1-209ENST00000488033 SEPSECSQ9HD40 501 aaKnown RBP9.41□□□□□ -0.9
HCLS1-209ENST00000488033 C8orf4Q9NR00 106 aa9.41□□□□□ -0.9
HCLS1-209ENST00000488033 MDFICQ9P1T7 246 aa9.41□□□□□ -0.9
HCLS1-209ENST00000488033 U3KQE9 123 aa9.41□□□□□ -0.9
HCLS1-209ENST00000488033 F5H768 121 aa9.4□□□□□ -0.9
HCLS1-209ENST00000488033 SCGB2A1O75556 95 aa9.4□□□□□ -0.9
HCLS1-209ENST00000488033 HNRNPCP07910 306 aaKnown RBP eCLIP9.4□□□□□ -0.9
HCLS1-209ENST00000488033 SNCAP37840 140 aa9.4□□□□□ -0.9
HCLS1-209ENST00000488033 NKX2-1P43699 371 aaPredicted RBP9.4□□□□□ -0.9
HCLS1-209ENST00000488033 ALDH3B2P48448 385 aa9.4□□□□□ -0.9
HCLS1-209ENST00000488033 DEFB1P60022 68 aa9.4□□□□□ -0.9
HCLS1-209ENST00000488033 HSPE1P61604 102 aaKnown RBP9.4□□□□□ -0.9
HCLS1-209ENST00000488033 CLINT1Q14677 625 aa9.4□□□□□ -0.9
HCLS1-209ENST00000488033 SPINK9Q5DT21 86 aa9.4□□□□□ -0.9
HCLS1-209ENST00000488033 TTC32Q5I0X7 151 aa9.4□□□□□ -0.9
HCLS1-209ENST00000488033 SSX7Q7RTT5 188 aa9.4□□□□□ -0.9
HCLS1-209ENST00000488033 OR4B1Q8NGF8 309 aa9.4□□□□□ -0.9
HCLS1-209ENST00000488033 MGLLQ99685 303 aa9.4□□□□□ -0.9
HCLS1-209ENST00000488033 KRTAP1-5Q9BYS1 174 aa9.4□□□□□ -0.9
HCLS1-209ENST00000488033 NRN1Q9NPD7 142 aa9.4□□□□□ -0.9
HCLS1-209ENST00000488033 MRPL36Q9P0J6 103 aaKnown RBP9.4□□□□□ -0.9
HCLS1-209ENST00000488033 DAPK2Q9UIK4 370 aa9.4□□□□□ -0.9
HCLS1-209ENST00000488033 FUSP35637 526 aaKnown RBP eCLIP9.39□□□□□ -0.91
HCLS1-209ENST00000488033 TIGITQ495A1 244 aa9.39□□□□□ -0.91
HCLS1-209ENST00000488033 H2BFWTQ7Z2G1 175 aa9.39□□□□□ -0.91
HCLS1-209ENST00000488033 C1orf158Q8N1D5 194 aa9.39□□□□□ -0.91
HCLS1-209ENST00000488033 ZNF709Q8N972 641 aa9.39□□□□□ -0.91
HCLS1-209ENST00000488033 OR5AP2Q8NGF4 316 aa9.39□□□□□ -0.91
HCLS1-209ENST00000488033 MAGT1Q9H0U3 335 aa9.39□□□□□ -0.91
HCLS1-209ENST00000488033 TRAV18A0A075B6X5 111 aa9.38□□□□□ -0.91
HCLS1-209ENST00000488033 CORTO00230 105 aa9.38□□□□□ -0.91
HCLS1-209ENST00000488033 SMR3BP02814 79 aaPredicted RBP9.38□□□□□ -0.91
HCLS1-209ENST00000488033 MLANAQ16655 118 aa9.38□□□□□ -0.91
HCLS1-209ENST00000488033 CMTM1Q8IZ96 169 aa9.38□□□□□ -0.91
HCLS1-209ENST00000488033 OR4X1Q8NH49 305 aa9.38□□□□□ -0.91
HCLS1-209ENST00000488033 LINC00052Q96N35 136 aa9.38□□□□□ -0.91
HCLS1-209ENST00000488033 SLC35B3Q9H1N7 401 aa9.38□□□□□ -0.91
HCLS1-209ENST00000488033 SAV1Q9H4B6 383 aaPredicted RBP9.38□□□□□ -0.91
HCLS1-209ENST00000488033 PGPEP1Q9NXJ5 209 aa9.38□□□□□ -0.91
HCLS1-209ENST00000488033 HMCN2Q8NDA2 5059 aa9.37□□□□□ -0.91
HCLS1-209ENST00000488033 IGKV1-17P01599 117 aa9.37□□□□□ -0.91
HCLS1-209ENST00000488033 DEFB130BP0DP73 79 aa9.37□□□□□ -0.91
HCLS1-209ENST00000488033 DEFB130AP0DP74 79 aa9.37□□□□□ -0.91
HCLS1-209ENST00000488033 OPRK1P41145 380 aa9.37□□□□□ -0.91
HCLS1-209ENST00000488033 SUB1P53999 127 aaKnown RBP eCLIP9.37□□□□□ -0.91
HCLS1-209ENST00000488033 USF2Q15853 346 aaPredicted RBP9.37□□□□□ -0.91
HCLS1-209ENST00000488033 SIGLEC15Q6ZMC9 328 aa9.37□□□□□ -0.91
HCLS1-209ENST00000488033 RNF141Q8WVD5 230 aa9.37□□□□□ -0.91
HCLS1-209ENST00000488033 SEC22AQ96IW7 307 aa9.37□□□□□ -0.91
HCLS1-209ENST00000488033 ZNF2Q9BSG1 426 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 154.6 ms