RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 SLC50A1Q9BRV3 221 aa-0.09□□□□□ -2.42
CCDC66-219ENST00000484441 CISHQ9NSE2 258 aa-0.09□□□□□ -2.42
CCDC66-219ENST00000484441 DKKL1Q9UK85 242 aa-0.09□□□□□ -2.42
CCDC66-219ENST00000484441 FLGP20930 4061 aaPredicted RBP-0.09□□□□□ -2.42
CCDC66-219ENST00000484441 CFAP54Q96N23 3096 aa-0.09□□□□□ -2.42
CCDC66-219ENST00000484441 SPTBN1Q01082 2364 aaKnown RBP-0.09□□□□□ -2.42
CCDC66-219ENST00000484441 CUBNO60494 3623 aa-0.09□□□□□ -2.42
CCDC66-219ENST00000484441 DCHS2Q6V1P9 2916 aa-0.09□□□□□ -2.42
CCDC66-219ENST00000484441 LRBAP50851 2863 aa-0.09□□□□□ -2.42
CCDC66-219ENST00000484441 ALMS1Q8TCU4 4167 aa-0.09□□□□□ -2.42
CCDC66-219ENST00000484441 RALGAPA2Q2PPJ7 1873 aa-0.1□□□□□ -2.42
CCDC66-219ENST00000484441 CELSR2Q9HCU4 2923 aa-0.1□□□□□ -2.42
CCDC66-219ENST00000484441 PKD1P98161 4303 aa-0.1□□□□□ -2.43
CCDC66-219ENST00000484441 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.1□□□□□ -2.43
CCDC66-219ENST00000484441 IQCF5A8MTL0 148 aa-0.1□□□□□ -2.43
CCDC66-219ENST00000484441 NDUFS6O75380 124 aaKnown RBP-0.1□□□□□ -2.43
CCDC66-219ENST00000484441 PRM2P04554 102 aa-0.1□□□□□ -2.43
CCDC66-219ENST00000484441 UGT2B7P16662 529 aa-0.1□□□□□ -2.43
CCDC66-219ENST00000484441 CDC34P49427 236 aaPredicted RBP-0.1□□□□□ -2.43
CCDC66-219ENST00000484441 RAB4BP61018 213 aa-0.1□□□□□ -2.43
CCDC66-219ENST00000484441 CNBPP62633 177 aaKnown RBP-0.1□□□□□ -2.43
CCDC66-219ENST00000484441 FABP9Q0Z7S8 132 aa-0.1□□□□□ -2.43
CCDC66-219ENST00000484441 PDPK2PQ6A1A2 396 aa-0.1□□□□□ -2.43
CCDC66-219ENST00000484441 HIST2H3AQ71DI3 136 aa-0.1□□□□□ -2.43
CCDC66-219ENST00000484441 C5orf42Q9H799 3197 aa-0.1□□□□□ -2.43
CCDC66-219ENST00000484441 LOC400499M0QZD8 3231 aa-0.1□□□□□ -2.43
CCDC66-219ENST00000484441 COL24A1Q17RW2 1714 aa-0.1□□□□□ -2.43
CCDC66-219ENST00000484441 MUC3AQ02505 3323 aa-0.1□□□□□ -2.43
CCDC66-219ENST00000484441 MKI67P46013 3256 aaKnown RBP-0.11□□□□□ -2.43
CCDC66-219ENST00000484441 DENND4CQ5VZ89 1909 aa-0.11□□□□□ -2.43
CCDC66-219ENST00000484441 ZFHX3Q15911 3703 aa-0.11□□□□□ -2.43
CCDC66-219ENST00000484441 CSMD3Q7Z407 3707 aa-0.11□□□□□ -2.43
CCDC66-219ENST00000484441 CHD7Q9P2D1 2997 aa-0.11□□□□□ -2.43
CCDC66-219ENST00000484441 TRIOO75962 3097 aa-0.11□□□□□ -2.43
CCDC66-219ENST00000484441 ASCC3Q8N3C0 2202 aaKnown RBP-0.11□□□□□ -2.43
CCDC66-219ENST00000484441 PKHD1P08F94 4074 aa-0.11□□□□□ -2.43
CCDC66-219ENST00000484441 ACACAQ13085 2346 aa-0.11□□□□□ -2.43
CCDC66-219ENST00000484441 GOLGA8MH3BSY2 632 aa-0.11□□□□□ -2.43
CCDC66-219ENST00000484441 HTR1AP08908 422 aa-0.11□□□□□ -2.43
CCDC66-219ENST00000484441 FKBP2P26885 142 aaKnown RBP-0.11□□□□□ -2.43
CCDC66-219ENST00000484441 CCL20P78556 96 aa-0.11□□□□□ -2.43
CCDC66-219ENST00000484441 KRTAP19-7Q3SYF9 63 aa-0.11□□□□□ -2.43
CCDC66-219ENST00000484441 LELP1Q5T871 98 aa-0.11□□□□□ -2.43
CCDC66-219ENST00000484441 PHF13Q86YI8 300 aaPredicted RBP-0.11□□□□□ -2.43
CCDC66-219ENST00000484441 Q8N402 240 aa-0.11□□□□□ -2.43
CCDC66-219ENST00000484441 GPR32P1Q8NGA4 272 aa-0.11□□□□□ -2.43
CCDC66-219ENST00000484441 RASSF5Q8WWW0 418 aa-0.11□□□□□ -2.43
CCDC66-219ENST00000484441 FKBP14Q9NWM8 211 aa-0.11□□□□□ -2.43
CCDC66-219ENST00000484441 CSMD2Q7Z408 3487 aa-0.11□□□□□ -2.43
CCDC66-219ENST00000484441 CFAP47Q6ZTR5 3102 aa-0.11□□□□□ -2.43
CCDC66-219ENST00000484441 PCNTO95613 3336 aa-0.11□□□□□ -2.43
CCDC66-219ENST00000484441 MUC4Q99102 2169 aa-0.11□□□□□ -2.43
CCDC66-219ENST00000484441 ADGRG4Q8IZF6 3080 aa-0.11□□□□□ -2.43
CCDC66-219ENST00000484441 DNAH11Q96DT5 4516 aa-0.11□□□□□ -2.43
CCDC66-219ENST00000484441 DNAH8Q96JB1 4490 aa-0.11□□□□□ -2.43
CCDC66-219ENST00000484441 TNCP24821 2201 aa-0.11□□□□□ -2.43
CCDC66-219ENST00000484441 URB1O60287 2271 aaKnown RBP-0.12□□□□□ -2.43
CCDC66-219ENST00000484441 ABCA1O95477 2261 aa-0.12□□□□□ -2.43
CCDC66-219ENST00000484441 SVEP1Q4LDE5 3571 aa-0.12□□□□□ -2.43
CCDC66-219ENST00000484441 CLDN25C9JDP6 229 aa-0.12□□□□□ -2.43
CCDC66-219ENST00000484441 ASAH2BP0C7U1 165 aa-0.12□□□□□ -2.43
CCDC66-219ENST00000484441 MIFP14174 115 aa-0.12□□□□□ -2.43
CCDC66-219ENST00000484441 KCNE1P15382 129 aa-0.12□□□□□ -2.43
CCDC66-219ENST00000484441 CAV1Q03135 178 aa-0.12□□□□□ -2.43
CCDC66-219ENST00000484441 ANGPT1Q15389 498 aa-0.12□□□□□ -2.43
CCDC66-219ENST00000484441 KRTAP19-8Q3LI54 63 aa-0.12□□□□□ -2.43
CCDC66-219ENST00000484441 KCTD7Q96MP8 289 aa-0.12□□□□□ -2.43
CCDC66-219ENST00000484441 EFCAB1Q9HAE3 211 aa-0.12□□□□□ -2.43
CCDC66-219ENST00000484441 CKLFQ9UBR5 152 aa-0.12□□□□□ -2.43
CCDC66-219ENST00000484441 COL1A1P02452 1464 aaPredicted RBP-0.12□□□□□ -2.43
CCDC66-219ENST00000484441 ANK3Q12955 4377 aaKnown RBP-0.12□□□□□ -2.43
CCDC66-219ENST00000484441 PKHD1L1Q86WI1 4243 aa-0.12□□□□□ -2.43
CCDC66-219ENST00000484441 PEAK1Q9H792 1746 aa-0.13□□□□□ -2.43
CCDC66-219ENST00000484441 SCN3AQ9NY46 2000 aa-0.13□□□□□ -2.43
CCDC66-219ENST00000484441 PLCE1Q9P212 2302 aa-0.13□□□□□ -2.43
CCDC66-219ENST00000484441 CEP350Q5VT06 3117 aa-0.13□□□□□ -2.43
CCDC66-219ENST00000484441 SZT2Q5T011 3432 aa-0.13□□□□□ -2.43
CCDC66-219ENST00000484441 DNAH10Q8IVF4 4471 aa-0.13□□□□□ -2.43
CCDC66-219ENST00000484441 MAP3K7CLP57077 242 aa-0.13□□□□□ -2.43
CCDC66-219ENST00000484441 PPP1R1AQ13522 171 aa-0.13□□□□□ -2.43
CCDC66-219ENST00000484441 CIRBPQ14011 172 aaKnown RBP-0.13□□□□□ -2.43
CCDC66-219ENST00000484441 PFN4Q8NHR9 129 aa-0.13□□□□□ -2.43
CCDC66-219ENST00000484441 SPRR2FQ96RM1 72 aa-0.13□□□□□ -2.43
CCDC66-219ENST00000484441 OR51I2Q9H344 312 aa-0.13□□□□□ -2.43
CCDC66-219ENST00000484441 FRYQ5TBA9 3013 aa-0.13□□□□□ -2.43
CCDC66-219ENST00000484441 DNAH9Q9NYC9 4486 aa-0.13□□□□□ -2.43
CCDC66-219ENST00000484441 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.13□□□□□ -2.43
CCDC66-219ENST00000484441 DNAH2Q9P225 4427 aa-0.13□□□□□ -2.43
CCDC66-219ENST00000484441 ZZEF1O43149 2961 aa-0.13□□□□□ -2.43
CCDC66-219ENST00000484441 WDFY3Q8IZQ1 3526 aa-0.13□□□□□ -2.43
CCDC66-219ENST00000484441 VCANP13611 3396 aa-0.14□□□□□ -2.43
CCDC66-219ENST00000484441 COL14A1Q05707 1796 aaKnown RBP-0.14□□□□□ -2.43
CCDC66-219ENST00000484441 DNAH12Q6ZR08 3092 aa-0.14□□□□□ -2.43
CCDC66-219ENST00000484441 CACNA1CQ13936 2221 aa-0.14□□□□□ -2.43
CCDC66-219ENST00000484441 CMYA5Q8N3K9 4069 aa-0.14□□□□□ -2.43
CCDC66-219ENST00000484441 DMXL1Q9Y485 3027 aa-0.14□□□□□ -2.43
CCDC66-219ENST00000484441 F5H768 121 aa-0.14□□□□□ -2.43
CCDC66-219ENST00000484441 RBM3P98179 157 aaKnown RBP-0.14□□□□□ -2.43
CCDC66-219ENST00000484441 GLT8D1Q68CQ7 371 aa-0.14□□□□□ -2.43
CCDC66-219ENST00000484441 NDEL1Q9GZM8 345 aa-0.14□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms