RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 TMEM50AO95807 157 aa10.52□□□□□ -0.73
HDAC6-224ENST00000481929 RAB3BP20337 219 aa10.52□□□□□ -0.73
HDAC6-224ENST00000481929 MYL9P24844 172 aa10.52□□□□□ -0.73
HDAC6-224ENST00000481929 PPP5CP53041 499 aa10.52□□□□□ -0.73
HDAC6-224ENST00000481929 MLLT11Q13015 90 aaPredicted RBP10.52□□□□□ -0.73
HDAC6-224ENST00000481929 Q5VSD8 79 aa10.52□□□□□ -0.73
HDAC6-224ENST00000481929 FCAMRQ8WWV6 532 aa10.52□□□□□ -0.73
HDAC6-224ENST00000481929 HLA-DRB4P13762 266 aa10.51□□□□□ -0.73
HDAC6-224ENST00000481929 GNRHRP30968 328 aa10.51□□□□□ -0.73
HDAC6-224ENST00000481929 AP2S1P53680 142 aaPredicted RBP10.51□□□□□ -0.73
HDAC6-224ENST00000481929 HERV-K104P61576 105 aa10.51□□□□□ -0.73
HDAC6-224ENST00000481929 ERHP84090 104 aaKnown RBP10.51□□□□□ -0.73
HDAC6-224ENST00000481929 FRZBQ92765 325 aa10.51□□□□□ -0.73
HDAC6-224ENST00000481929 TMEM230Q96A57 120 aa10.51□□□□□ -0.73
HDAC6-224ENST00000481929 SCN3BQ9NY72 215 aa10.51□□□□□ -0.73
HDAC6-224ENST00000481929 YTHDF2Q9Y5A9 579 aaKnown RBP10.51□□□□□ -0.73
HDAC6-224ENST00000481929 HLA-DRB4X5D2U9 266 aa10.51□□□□□ -0.73
HDAC6-224ENST00000481929 LOC102723971A0A1B0GUV8 181 aa10.5□□□□□ -0.73
HDAC6-224ENST00000481929 FAM90A26D6RGX4 464 aa10.5□□□□□ -0.73
HDAC6-224ENST00000481929 SCGB2A1O75556 95 aa10.5□□□□□ -0.73
HDAC6-224ENST00000481929 HBE1P02100 147 aa10.5□□□□□ -0.73
HDAC6-224ENST00000481929 CCL18P55774 89 aa10.5□□□□□ -0.73
HDAC6-224ENST00000481929 FXYD7P58549 80 aa10.5□□□□□ -0.73
HDAC6-224ENST00000481929 PRCDQ00LT1 54 aa10.5□□□□□ -0.73
HDAC6-224ENST00000481929 HOGA1Q86XE5 327 aa10.5□□□□□ -0.73
HDAC6-224ENST00000481929 LYPD1Q8N2G4 141 aa10.5□□□□□ -0.73
HDAC6-224ENST00000481929 RPS10-NUDT3A0A1W2PQS6 291 aa10.49□□□□□ -0.73
HDAC6-224ENST00000481929 PGLYRP1O75594 196 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-224ENST00000481929 NUDT3O95989 172 aa10.49□□□□□ -0.73
HDAC6-224ENST00000481929 IGKV3-20P01619 116 aa10.49□□□□□ -0.73
HDAC6-224ENST00000481929 BTF3P20290 206 aaKnown RBP10.49□□□□□ -0.73
HDAC6-224ENST00000481929 HOXA1P49639 335 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-224ENST00000481929 OR4A16Q8NH70 328 aa10.49□□□□□ -0.73
HDAC6-224ENST00000481929 GLMPQ8WWB7 406 aa10.49□□□□□ -0.73
HDAC6-224ENST00000481929 SEPSECSQ9HD40 501 aaKnown RBP10.49□□□□□ -0.73
HDAC6-224ENST00000481929 DAPK2Q9UIK4 370 aa10.49□□□□□ -0.73
HDAC6-224ENST00000481929 GOLT1BQ9Y3E0 138 aa10.49□□□□□ -0.73
HDAC6-224ENST00000481929 VPS13BQ7Z7G8 4022 aa10.49□□□□□ -0.73
HDAC6-224ENST00000481929 ALDH3B2P48448 385 aa10.48□□□□□ -0.73
HDAC6-224ENST00000481929 TTC32Q5I0X7 151 aa10.48□□□□□ -0.73
HDAC6-224ENST00000481929 C16orf54Q6UWD8 224 aa10.48□□□□□ -0.73
HDAC6-224ENST00000481929 LGALS14Q8TCE9 139 aa10.48□□□□□ -0.73
HDAC6-224ENST00000481929 MGLLQ99685 303 aa10.48□□□□□ -0.73
HDAC6-224ENST00000481929 PTTG2Q9NZH5 202 aa10.48□□□□□ -0.73
HDAC6-224ENST00000481929 LINC00588Q9Y4M8 146 aa10.48□□□□□ -0.73
HDAC6-224ENST00000481929 UBR4Q5T4S7 5183 aa10.47□□□□□ -0.73
HDAC6-224ENST00000481929 SMIM30A4D0T7 59 aa10.47□□□□□ -0.73
HDAC6-224ENST00000481929 CLN5O75503 358 aa10.47□□□□□ -0.73
HDAC6-224ENST00000481929 FCER2P06734 321 aa10.47□□□□□ -0.73
HDAC6-224ENST00000481929 SNCAP37840 140 aa10.47□□□□□ -0.73
HDAC6-224ENST00000481929 NKX2-1P43699 371 aaPredicted RBP10.47□□□□□ -0.73
HDAC6-224ENST00000481929 RRN3P1Q2M238 152 aa10.47□□□□□ -0.73
HDAC6-224ENST00000481929 C7orf50Q9BRJ6 194 aaKnown RBP10.47□□□□□ -0.73
HDAC6-224ENST00000481929 NRN1Q9NPD7 142 aa10.47□□□□□ -0.73
HDAC6-224ENST00000481929 U3KQE9 123 aa10.47□□□□□ -0.73
HDAC6-224ENST00000481929 CORTO00230 105 aa10.46□□□□□ -0.73
HDAC6-224ENST00000481929 HNRNPCP07910 306 aaKnown RBP eCLIP10.46□□□□□ -0.73
HDAC6-224ENST00000481929 HSPE1P61604 102 aaKnown RBP10.46□□□□□ -0.73
HDAC6-224ENST00000481929 H2BFWTQ7Z2G1 175 aa10.46□□□□□ -0.73
HDAC6-224ENST00000481929 CMTM1Q8IZ96 169 aa10.46□□□□□ -0.73
HDAC6-224ENST00000481929 OR5AP2Q8NGF4 316 aa10.46□□□□□ -0.73
HDAC6-224ENST00000481929 FAT1Q14517 4588 aa10.46□□□□□ -0.74
HDAC6-224ENST00000481929 J3QL48 77 aa10.45□□□□□ -0.74
HDAC6-224ENST00000481929 XGP55808 180 aa10.45□□□□□ -0.74
HDAC6-224ENST00000481929 CLINT1Q14677 625 aa10.45□□□□□ -0.74
HDAC6-224ENST00000481929 SPINK9Q5DT21 86 aa10.45□□□□□ -0.74
HDAC6-224ENST00000481929 GDF5OSQ5U4N7 250 aa10.45□□□□□ -0.74
HDAC6-224ENST00000481929 ZNF709Q8N972 641 aa10.45□□□□□ -0.74
HDAC6-224ENST00000481929 OR4X1Q8NH49 305 aa10.45□□□□□ -0.74
HDAC6-224ENST00000481929 KRTAP1-5Q9BYS1 174 aa10.45□□□□□ -0.74
HDAC6-224ENST00000481929 RHBDL2Q9NX52 303 aa10.45□□□□□ -0.74
HDAC6-224ENST00000481929 TPRKBQ9Y3C4 175 aa10.45□□□□□ -0.74
HDAC6-224ENST00000481929 TRAV18A0A075B6X5 111 aa10.44□□□□□ -0.74
HDAC6-224ENST00000481929 NOTOA8MTQ0 251 aa10.44□□□□□ -0.74
HDAC6-224ENST00000481929 F5H768 121 aa10.44□□□□□ -0.74
HDAC6-224ENST00000481929 RGS10O43665 173 aa10.44□□□□□ -0.74
HDAC6-224ENST00000481929 IGKV1-17P01599 117 aa10.44□□□□□ -0.74
HDAC6-224ENST00000481929 OPRK1P41145 380 aa10.44□□□□□ -0.74
HDAC6-224ENST00000481929 SUB1P53999 127 aaKnown RBP eCLIP10.44□□□□□ -0.74
HDAC6-224ENST00000481929 DLK1P80370 383 aa10.44□□□□□ -0.74
HDAC6-224ENST00000481929 TIGITQ495A1 244 aa10.44□□□□□ -0.74
HDAC6-224ENST00000481929 SSX7Q7RTT5 188 aa10.44□□□□□ -0.74
HDAC6-224ENST00000481929 C1orf158Q8N1D5 194 aa10.44□□□□□ -0.74
HDAC6-224ENST00000481929 SEC22AQ96IW7 307 aa10.44□□□□□ -0.74
HDAC6-224ENST00000481929 Q9H8V8 135 aa10.44□□□□□ -0.74
HDAC6-224ENST00000481929 EHFQ9NZC4 300 aa10.44□□□□□ -0.74
HDAC6-224ENST00000481929 MRPL36Q9P0J6 103 aaKnown RBP10.44□□□□□ -0.74
HDAC6-224ENST00000481929 TRAV30A0A087WSZ9 112 aa10.43□□□□□ -0.74
HDAC6-224ENST00000481929 GPR31O00270 319 aa10.43□□□□□ -0.74
HDAC6-224ENST00000481929 DEFB1P60022 68 aa10.43□□□□□ -0.74
HDAC6-224ENST00000481929 C22orf42Q6IC83 251 aa10.43□□□□□ -0.74
HDAC6-224ENST00000481929 SIGLEC15Q6ZMC9 328 aa10.43□□□□□ -0.74
HDAC6-224ENST00000481929 FOXI2Q6ZQN5 318 aa10.43□□□□□ -0.74
HDAC6-224ENST00000481929 SLC35G3Q8N808 338 aa10.43□□□□□ -0.74
HDAC6-224ENST00000481929 OR4B1Q8NGF8 309 aa10.43□□□□□ -0.74
HDAC6-224ENST00000481929 CLUHP3Q96NS8 147 aa10.43□□□□□ -0.74
HDAC6-224ENST00000481929 ZNF2Q9BSG1 426 aaPredicted RBP10.43□□□□□ -0.74
HDAC6-224ENST00000481929 MAGT1Q9H0U3 335 aa10.43□□□□□ -0.74
HDAC6-224ENST00000481929 SLC35B3Q9H1N7 401 aa10.43□□□□□ -0.74
HDAC6-224ENST00000481929 Q9H3A6 140 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms