RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 OR4C46A6NHA9 309 aa16.88■□□□□ 0.29
COL13A1-208ENST00000479733 K7EP13 123 aa16.88■□□□□ 0.29
COL13A1-208ENST00000479733 CDKN1BP46527 198 aa16.88■□□□□ 0.29
COL13A1-208ENST00000479733 ATP1A1-AS1Q5TC04 95 aa16.88■□□□□ 0.29
COL13A1-208ENST00000479733 INO80CQ6PI98 192 aaPredicted RBP16.88■□□□□ 0.29
COL13A1-208ENST00000479733 DUX4L9Q6RFH8 374 aaPredicted RBP16.88■□□□□ 0.29
COL13A1-208ENST00000479733 CBY3A6NI87 242 aa16.88■□□□□ 0.29
COL13A1-208ENST00000479733 SRRM4A7MD48 611 aaKnown RBP16.88■□□□□ 0.29
COL13A1-208ENST00000479733 VWC2LB2RUY7 222 aa16.88■□□□□ 0.29
COL13A1-208ENST00000479733 KIR2DS2P43631 304 aa16.88■□□□□ 0.29
COL13A1-208ENST00000479733 SSBP2P81877 361 aaPredicted RBP16.88■□□□□ 0.29
COL13A1-208ENST00000479733 TCF24Q7RTU0 167 aa16.88■□□□□ 0.29
COL13A1-208ENST00000479733 NUDT3O95989 172 aa16.87■□□□□ 0.29
COL13A1-208ENST00000479733 RND1Q92730 232 aa16.87■□□□□ 0.29
COL13A1-208ENST00000479733 SLC25A2Q9BXI2 301 aa16.87■□□□□ 0.29
COL13A1-208ENST00000479733 COMMD5Q9GZQ3 224 aa16.87■□□□□ 0.29
COL13A1-208ENST00000479733 ITGB1BP1O14713 200 aa16.87■□□□□ 0.29
COL13A1-208ENST00000479733 TMEM70Q9BUB7 260 aa16.87■□□□□ 0.29
COL13A1-208ENST00000479733 PRO3102Q9H379 93 aa16.87■□□□□ 0.29
COL13A1-208ENST00000479733 RP1L1Q8IWN7 2480 aaPredicted RBP16.87■□□□□ 0.29
COL13A1-208ENST00000479733 PNKDQ8N490 385 aa16.86■□□□□ 0.29
COL13A1-208ENST00000479733 OR2V2Q96R30 315 aa16.86■□□□□ 0.29
COL13A1-208ENST00000479733 LOC102724200A0A096LPH7 203 aaPredicted RBP16.86■□□□□ 0.29
COL13A1-208ENST00000479733 ZNF596Q8TC21 504 aa16.86■□□□□ 0.29
COL13A1-208ENST00000479733 FAM167A-AS1Q96KT0 104 aa16.86■□□□□ 0.29
COL13A1-208ENST00000479733 ABCA1O95477 2261 aa16.86■□□□□ 0.29
COL13A1-208ENST00000479733 VWA1Q6PCB0 445 aa16.86■□□□□ 0.29
COL13A1-208ENST00000479733 MOGAT3Q86VF5 341 aa16.86■□□□□ 0.29
COL13A1-208ENST00000479733 GCSAMQ8N6F7 178 aa16.86■□□□□ 0.29
COL13A1-208ENST00000479733 DEFB108BQ8NET1 73 aa16.86■□□□□ 0.29
COL13A1-208ENST00000479733 PPP1R35Q8TAP8 253 aa16.86■□□□□ 0.29
COL13A1-208ENST00000479733 URB1-AS1Q96HZ7 61 aa16.86■□□□□ 0.29
COL13A1-208ENST00000479733 F2RL2O00254 374 aa16.85■□□□□ 0.29
COL13A1-208ENST00000479733 LDLRAD2Q5SZI1 272 aa16.85■□□□□ 0.29
COL13A1-208ENST00000479733 GRAMD2BQ96HH9 432 aa16.85■□□□□ 0.29
COL13A1-208ENST00000479733 TEX50A0A1B0GTY4 177 aa16.85■□□□□ 0.29
COL13A1-208ENST00000479733 OR2T8A6NH00 312 aa16.85■□□□□ 0.29
COL13A1-208ENST00000479733 MBD6Q96DN6 1003 aa16.85■□□□□ 0.29
COL13A1-208ENST00000479733 VPS25Q9BRG1 176 aa16.85■□□□□ 0.29
COL13A1-208ENST00000479733 PRNDQ9UKY0 176 aa16.85■□□□□ 0.29
COL13A1-208ENST00000479733 SMG1Q96Q15 3661 aaKnown RBP16.85■□□□□ 0.29
COL13A1-208ENST00000479733 SPENQ96T58 3664 aaKnown RBP16.84■□□□□ 0.29
COL13A1-208ENST00000479733 C21orf140B9A014 251 aa16.84■□□□□ 0.29
COL13A1-208ENST00000479733 PEX7O00628 323 aa16.84■□□□□ 0.29
COL13A1-208ENST00000479733 ZNF137PP52743 207 aa16.84■□□□□ 0.29
COL13A1-208ENST00000479733 PRCDQ00LT1 54 aa16.84■□□□□ 0.29
COL13A1-208ENST00000479733 C17orf58Q2M2W7 97 aa16.84■□□□□ 0.29
COL13A1-208ENST00000479733 BLNKQ8WV28 456 aa16.84■□□□□ 0.29
COL13A1-208ENST00000479733 NAV3Q8IVL0 2385 aa16.84■□□□□ 0.29
COL13A1-208ENST00000479733 PSG1P11464 419 aa16.84■□□□□ 0.29
COL13A1-208ENST00000479733 WIPF2Q8TF74 440 aaPredicted RBP16.84■□□□□ 0.29
COL13A1-208ENST00000479733 PMCHL2Q9BQD1 86 aa16.84■□□□□ 0.29
COL13A1-208ENST00000479733 PAXXQ9BUH6 204 aa16.84■□□□□ 0.29
COL13A1-208ENST00000479733 SRRM5B3KS81 715 aa16.83■□□□□ 0.29
COL13A1-208ENST00000479733 COX7A2P2O60397 106 aa16.83■□□□□ 0.29
COL13A1-208ENST00000479733 IGKV3-15P01624 115 aa16.83■□□□□ 0.29
COL13A1-208ENST00000479733 VHLLQ6RSH7 139 aa16.83■□□□□ 0.29
COL13A1-208ENST00000479733 Q6ZT83 130 aa16.83■□□□□ 0.29
COL13A1-208ENST00000479733 ZNF138P52744 262 aa16.83■□□□□ 0.28
COL13A1-208ENST00000479733 ZNF841Q6ZN19 808 aa16.83■□□□□ 0.28
COL13A1-208ENST00000479733 ZC2HC1AQ96GY0 325 aa16.83■□□□□ 0.28
COL13A1-208ENST00000479733 BOD1L1Q8NFC6 3051 aa16.83■□□□□ 0.28
COL13A1-208ENST00000479733 MUC21A0A0G2JKD1 596 aa16.83■□□□□ 0.28
COL13A1-208ENST00000479733 MUC21A0A140T8X8 626 aa16.83■□□□□ 0.28
COL13A1-208ENST00000479733 MUC21Q5SSG8 566 aa16.83■□□□□ 0.28
COL13A1-208ENST00000479733 ZNF329Q86UD4 541 aa16.83■□□□□ 0.28
COL13A1-208ENST00000479733 MDS2Q8NDY4 140 aa16.83■□□□□ 0.28
COL13A1-208ENST00000479733 A0A1W2PNU3 283 aaPredicted RBP16.82■□□□□ 0.28
COL13A1-208ENST00000479733 UPK2O00526 184 aa16.82■□□□□ 0.28
COL13A1-208ENST00000479733 SPRY3O43610 288 aa16.82■□□□□ 0.28
COL13A1-208ENST00000479733 S100A7P31151 101 aa16.82■□□□□ 0.28
COL13A1-208ENST00000479733 KLF5Q13887 457 aaPredicted RBP16.82■□□□□ 0.28
COL13A1-208ENST00000479733 MSMPQ1L6U9 139 aa16.82■□□□□ 0.28
COL13A1-208ENST00000479733 SSX8Q7RTT4 187 aa16.82■□□□□ 0.28
COL13A1-208ENST00000479733 SELENOKQ9Y6D0 94 aa16.82■□□□□ 0.28
COL13A1-208ENST00000479733 RNASE2P10153 161 aaKnown RBP16.82■□□□□ 0.28
COL13A1-208ENST00000479733 MAP1BP46821 2468 aaKnown RBP16.81■□□□□ 0.28
COL13A1-208ENST00000479733 PLXNB1O43157 2135 aa16.81■□□□□ 0.28
COL13A1-208ENST00000479733 H3BTX0 84 aa16.81■□□□□ 0.28
COL13A1-208ENST00000479733 CD69Q07108 199 aa16.81■□□□□ 0.28
COL13A1-208ENST00000479733 RTL8BQ17RB0 113 aa16.81■□□□□ 0.28
COL13A1-208ENST00000479733 AMMECR1LQ6DCA0 310 aa16.81■□□□□ 0.28
COL13A1-208ENST00000479733 TRAV30A0A087WSZ9 112 aa16.81■□□□□ 0.28
COL13A1-208ENST00000479733 TAX1BP3O14907 124 aa16.81■□□□□ 0.28
COL13A1-208ENST00000479733 PGLYRP4Q96LB8 373 aa16.81■□□□□ 0.28
COL13A1-208ENST00000479733 ROS1P08922 2347 aa16.8■□□□□ 0.28
COL13A1-208ENST00000479733 SAA1P0DJI8 122 aaPredicted RBP16.8■□□□□ 0.28
COL13A1-208ENST00000479733 LRRC10Q5BKY1 277 aa16.8■□□□□ 0.28
COL13A1-208ENST00000479733 E7EUB6 86 aa16.8■□□□□ 0.28
COL13A1-208ENST00000479733 FNDC10F2Z333 226 aa16.8■□□□□ 0.28
COL13A1-208ENST00000479733 HIST1H1EP10412 219 aaKnown RBP16.8■□□□□ 0.28
COL13A1-208ENST00000479733 C10orf113Q5VZT2 155 aa16.8■□□□□ 0.28
COL13A1-208ENST00000479733 RASL11AQ6T310 242 aa16.8■□□□□ 0.28
COL13A1-208ENST00000479733 NPIPB3Q92617 1050 aa16.8■□□□□ 0.28
COL13A1-208ENST00000479733 C19orf24Q9BVV8 132 aa16.8■□□□□ 0.28
COL13A1-208ENST00000479733 DSCAMO60469 2012 aa16.8■□□□□ 0.28
COL13A1-208ENST00000479733 CFAP47Q6ZTR5 3102 aa16.8■□□□□ 0.28
COL13A1-208ENST00000479733 IGHV1-24A0A0C4DH33 117 aa16.8■□□□□ 0.28
COL13A1-208ENST00000479733 KBTBD11-OT1A0A1B0GTJ5 212 aa16.8■□□□□ 0.28
COL13A1-208ENST00000479733 SYS1-DBNDD2H3BUS1 97 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms