RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 OR2T8A6NH00 312 aa8.39□□□□□ -1.07
COL4A6-205ENST00000468338 NDUFA4O00483 81 aa8.39□□□□□ -1.07
COL4A6-205ENST00000468338 IGHV4-30-4P0DP06 118 aa8.39□□□□□ -1.07
COL4A6-205ENST00000468338 RNASE2P10153 161 aaKnown RBP8.39□□□□□ -1.07
COL4A6-205ENST00000468338 SPCS3P61009 180 aa8.39□□□□□ -1.07
COL4A6-205ENST00000468338 MLANAQ16655 118 aa8.39□□□□□ -1.07
COL4A6-205ENST00000468338 SPANXN2Q5MJ10 180 aa8.39□□□□□ -1.07
COL4A6-205ENST00000468338 TMEM268Q5VZI3 342 aa8.39□□□□□ -1.07
COL4A6-205ENST00000468338 SBSPONQ8IVN8 264 aa8.39□□□□□ -1.07
COL4A6-205ENST00000468338 UXS1Q8NBZ7 420 aa8.39□□□□□ -1.07
COL4A6-205ENST00000468338 CACNG8Q8WXS5 425 aa8.39□□□□□ -1.07
COL4A6-205ENST00000468338 GPR146Q96CH1 333 aa8.39□□□□□ -1.07
COL4A6-205ENST00000468338 SDHCQ99643 169 aaPredicted RBP8.39□□□□□ -1.07
COL4A6-205ENST00000468338 SLC25A21Q9BQT8 299 aaPredicted RBP8.39□□□□□ -1.07
COL4A6-205ENST00000468338 SPATA25Q9BR10 227 aa8.39□□□□□ -1.07
COL4A6-205ENST00000468338 PALMDQ9NP74 551 aa8.39□□□□□ -1.07
COL4A6-205ENST00000468338 GAR1Q9NY12 217 aaKnown RBP8.39□□□□□ -1.07
COL4A6-205ENST00000468338 MRPL27Q9P0M9 148 aaKnown RBP8.39□□□□□ -1.07
COL4A6-205ENST00000468338 MLXQ9UH92 298 aa8.39□□□□□ -1.07
COL4A6-205ENST00000468338 KCNIP3Q9Y2W7 256 aa8.39□□□□□ -1.07
COL4A6-205ENST00000468338 A0A0B4J2A0 478 aa8.38□□□□□ -1.07
COL4A6-205ENST00000468338 IGHV3-35A0A0C4DH35 117 aa8.38□□□□□ -1.07
COL4A6-205ENST00000468338 K7EMT4 169 aa8.38□□□□□ -1.07
COL4A6-205ENST00000468338 MT-CO2P00403 227 aa8.38□□□□□ -1.07
COL4A6-205ENST00000468338 IFNA17P01571 189 aa8.38□□□□□ -1.07
COL4A6-205ENST00000468338 MFAP4P55083 255 aa8.38□□□□□ -1.07
COL4A6-205ENST00000468338 TMEM128Q5BJH2 165 aa8.38□□□□□ -1.07
COL4A6-205ENST00000468338 SPINK9Q5DT21 86 aa8.38□□□□□ -1.07
COL4A6-205ENST00000468338 NMSQ5H8A3 153 aa8.38□□□□□ -1.07
COL4A6-205ENST00000468338 SLC35G3Q8N808 338 aa8.38□□□□□ -1.07
COL4A6-205ENST00000468338 DYNLRB2Q8TF09 96 aa8.38□□□□□ -1.07
COL4A6-205ENST00000468338 ASCL2Q99929 193 aa8.38□□□□□ -1.07
COL4A6-205ENST00000468338 CACNG5Q9UF02 275 aa8.38□□□□□ -1.07
COL4A6-205ENST00000468338 SHPKQ9UHJ6 478 aa8.38□□□□□ -1.07
COL4A6-205ENST00000468338 UFC1Q9Y3C8 167 aa8.38□□□□□ -1.07
COL4A6-205ENST00000468338 TRAV25A0A0B4J276 109 aa8.37□□□□□ -1.07
COL4A6-205ENST00000468338 PRSS29PA6NIE9 313 aa8.37□□□□□ -1.07
COL4A6-205ENST00000468338 C15orf62A8K5M9 175 aa8.37□□□□□ -1.07
COL4A6-205ENST00000468338 CORTO00230 105 aa8.37□□□□□ -1.07
COL4A6-205ENST00000468338 AKR1C4P17516 323 aa8.37□□□□□ -1.07
COL4A6-205ENST00000468338 SNCAP37840 140 aa8.37□□□□□ -1.07
COL4A6-205ENST00000468338 SUB1P53999 127 aaKnown RBP eCLIP8.37□□□□□ -1.07
COL4A6-205ENST00000468338 BAK1Q16611 211 aa8.37□□□□□ -1.07
COL4A6-205ENST00000468338 Q56UQ5 140 aa8.37□□□□□ -1.07
COL4A6-205ENST00000468338 ZNF57Q68EA5 555 aaPredicted RBP8.37□□□□□ -1.07
COL4A6-205ENST00000468338 LINC00322Q6ZN03 302 aaPredicted RBP8.37□□□□□ -1.07
COL4A6-205ENST00000468338 TMEM61Q8N0U2 210 aa8.37□□□□□ -1.07
COL4A6-205ENST00000468338 LRTM2Q8N967 370 aa8.37□□□□□ -1.07
COL4A6-205ENST00000468338 RNASE11Q8TAA1 199 aaKnown RBP8.37□□□□□ -1.07
COL4A6-205ENST00000468338 OR10C1Q96KK4 312 aa8.37□□□□□ -1.07
COL4A6-205ENST00000468338 PDCD10Q9BUL8 212 aa8.37□□□□□ -1.07
COL4A6-205ENST00000468338 DAZ1Q9NQZ3 744 aaKnown RBP8.37□□□□□ -1.07
COL4A6-205ENST00000468338 CACFD1Q9UGQ2 172 aa8.37□□□□□ -1.07
COL4A6-205ENST00000468338 U3KQK5 164 aa8.37□□□□□ -1.07
COL4A6-205ENST00000468338 TENM3Q9P273 2699 aa8.36□□□□□ -1.07
COL4A6-205ENST00000468338 C9orf118A6NHY6 69 aa8.36□□□□□ -1.07
COL4A6-205ENST00000468338 CD7P09564 240 aa8.36□□□□□ -1.07
COL4A6-205ENST00000468338 SULT1A3P0DMM9 295 aa8.36□□□□□ -1.07
COL4A6-205ENST00000468338 SULT1A4P0DMN0 295 aa8.36□□□□□ -1.07
COL4A6-205ENST00000468338 SRPXP78539 464 aa8.36□□□□□ -1.07
COL4A6-205ENST00000468338 LYZL2Q7Z4W2 148 aa8.36□□□□□ -1.07
COL4A6-205ENST00000468338 GTSCR1Q86UQ5 136 aa8.36□□□□□ -1.07
COL4A6-205ENST00000468338 LGI3Q8N145 548 aa8.36□□□□□ -1.07
COL4A6-205ENST00000468338 WWC2-AS2Q96NR7 200 aa8.36□□□□□ -1.07
COL4A6-205ENST00000468338 TM2D3Q9BRN9 247 aa8.36□□□□□ -1.07
COL4A6-205ENST00000468338 FNDC4Q9H6D8 234 aaPredicted RBP8.36□□□□□ -1.07
COL4A6-205ENST00000468338 A0A087WWL8 130 aa8.35□□□□□ -1.07
COL4A6-205ENST00000468338 PIGBOS1A0A0B4J2F0 54 aa8.35□□□□□ -1.07
COL4A6-205ENST00000468338 DUXBA0A1W2PPF3 345 aa8.35□□□□□ -1.07
COL4A6-205ENST00000468338 B5MCH6 92 aa8.35□□□□□ -1.07
COL4A6-205ENST00000468338 NUPL2O15504 423 aaKnown RBP8.35□□□□□ -1.07
COL4A6-205ENST00000468338 PITX3O75364 302 aa8.35□□□□□ -1.07
COL4A6-205ENST00000468338 IGHV3-48P01763 117 aa8.35□□□□□ -1.07
COL4A6-205ENST00000468338 ANXA3P12429 323 aa8.35□□□□□ -1.07
COL4A6-205ENST00000468338 HTR2BP41595 481 aa8.35□□□□□ -1.07
COL4A6-205ENST00000468338 NPBWR1P48145 328 aa8.35□□□□□ -1.07
COL4A6-205ENST00000468338 HOXA1P49639 335 aaPredicted RBP8.35□□□□□ -1.07
COL4A6-205ENST00000468338 CCR6P51684 374 aa8.35□□□□□ -1.07
COL4A6-205ENST00000468338 RELQ04864 619 aaPredicted RBP8.35□□□□□ -1.07
COL4A6-205ENST00000468338 C2orf83Q53S99 150 aa8.35□□□□□ -1.07
COL4A6-205ENST00000468338 BTNL8Q6UX41 500 aa8.35□□□□□ -1.07
COL4A6-205ENST00000468338 UBAC2Q8NBM4 344 aa8.35□□□□□ -1.07
COL4A6-205ENST00000468338 DUSP18Q8NEJ0 188 aa8.35□□□□□ -1.07
COL4A6-205ENST00000468338 TMEM170AQ8WVE7 144 aa8.35□□□□□ -1.07
COL4A6-205ENST00000468338 PINX1Q96BK5 328 aaKnown RBP8.35□□□□□ -1.07
COL4A6-205ENST00000468338 NEURL2Q9BR09 285 aa8.35□□□□□ -1.07
COL4A6-205ENST00000468338 ENY2Q9NPA8 101 aa8.35□□□□□ -1.07
COL4A6-205ENST00000468338 MRPL36Q9P0J6 103 aaKnown RBP8.35□□□□□ -1.07
COL4A6-205ENST00000468338 HSPB7Q9UBY9 170 aa8.35□□□□□ -1.07
COL4A6-205ENST00000468338 A0A1B0GU03 582 aa8.34□□□□□ -1.07
COL4A6-205ENST00000468338 NAP1L6A6NFF2 107 aa8.34□□□□□ -1.07
COL4A6-205ENST00000468338 TSPAN4O14817 238 aa8.34□□□□□ -1.07
COL4A6-205ENST00000468338 GNG7O60262 68 aa8.34□□□□□ -1.07
COL4A6-205ENST00000468338 TMEM50AO95807 157 aa8.34□□□□□ -1.07
COL4A6-205ENST00000468338 CD81P60033 236 aa8.34□□□□□ -1.07
COL4A6-205ENST00000468338 UBE2MP61081 183 aaKnown RBP8.34□□□□□ -1.07
COL4A6-205ENST00000468338 RAP2BP61225 183 aa8.34□□□□□ -1.07
COL4A6-205ENST00000468338 TNFRSF9Q07011 255 aa8.34□□□□□ -1.07
COL4A6-205ENST00000468338 SMCO1Q147U7 214 aa8.34□□□□□ -1.07
COL4A6-205ENST00000468338 RBMS2Q15434 407 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms