RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 HIST3H2BBQ8N257 126 aa1.66□□□□□ -2.14
VPS13A-209ENST00000467124 WFDC5Q8TCV5 224 aa1.66□□□□□ -2.14
VPS13A-209ENST00000467124 GNPDA2Q8TDQ7 276 aa1.66□□□□□ -2.14
VPS13A-209ENST00000467124 Q96M85 177 aa1.66□□□□□ -2.14
VPS13A-209ENST00000467124 ARMC1Q9NVT9 282 aa1.66□□□□□ -2.14
VPS13A-209ENST00000467124 MED29Q9NX70 200 aa1.66□□□□□ -2.14
VPS13A-209ENST00000467124 PLXNA3P51805 1871 aa1.66□□□□□ -2.14
VPS13A-209ENST00000467124 TRAV3A0A0B4J244 114 aa1.65□□□□□ -2.15
VPS13A-209ENST00000467124 CYBAP13498 195 aa1.65□□□□□ -2.15
VPS13A-209ENST00000467124 MAGEA12P43365 314 aa1.65□□□□□ -2.15
VPS13A-209ENST00000467124 NNATQ16517 81 aa1.65□□□□□ -2.15
VPS13A-209ENST00000467124 LINC01554Q52M75 96 aa1.65□□□□□ -2.15
VPS13A-209ENST00000467124 Q6Q795 121 aa1.65□□□□□ -2.15
VPS13A-209ENST00000467124 Q6ZQT0 140 aa1.65□□□□□ -2.15
VPS13A-209ENST00000467124 LCA10Q71F78 164 aa1.65□□□□□ -2.15
VPS13A-209ENST00000467124 DHFR2Q86XF0 187 aa1.65□□□□□ -2.15
VPS13A-209ENST00000467124 SIGLECL1Q8N7X8 197 aa1.65□□□□□ -2.15
VPS13A-209ENST00000467124 C20orf27Q9GZN8 174 aa1.65□□□□□ -2.15
VPS13A-209ENST00000467124 CKLFQ9UBR5 152 aa1.65□□□□□ -2.15
VPS13A-209ENST00000467124 ARL5AQ9Y689 179 aa1.65□□□□□ -2.15
VPS13A-209ENST00000467124 FN1P02751 2386 aaKnown RBP1.65□□□□□ -2.15
VPS13A-209ENST00000467124 TRAPPC13A5PLN9 417 aa1.64□□□□□ -2.15
VPS13A-209ENST00000467124 CST8O60676 142 aa1.64□□□□□ -2.15
VPS13A-209ENST00000467124 G6PCP35575 357 aa1.64□□□□□ -2.15
VPS13A-209ENST00000467124 ATP5G3P48201 142 aa1.64□□□□□ -2.15
VPS13A-209ENST00000467124 ARF6P62330 175 aa1.64□□□□□ -2.15
VPS13A-209ENST00000467124 DHRS4L2Q6PKH6 230 aa1.64□□□□□ -2.15
VPS13A-209ENST00000467124 GOLT1AQ6ZVE7 132 aa1.64□□□□□ -2.15
VPS13A-209ENST00000467124 OR4E2Q8NGC2 313 aa1.64□□□□□ -2.15
VPS13A-209ENST00000467124 OR11H6Q8NGC7 330 aa1.64□□□□□ -2.15
VPS13A-209ENST00000467124 OR8D4Q8NGM9 314 aa1.64□□□□□ -2.15
VPS13A-209ENST00000467124 STAG3L4Q8TBR4 150 aa1.64□□□□□ -2.15
VPS13A-209ENST00000467124 AP3S1Q92572 193 aa1.64□□□□□ -2.15
VPS13A-209ENST00000467124 TVP23BQ9NYZ1 205 aa1.64□□□□□ -2.15
VPS13A-209ENST00000467124 SS18L2Q9UHA2 77 aa1.64□□□□□ -2.15
VPS13A-209ENST00000467124 STOML2Q9UJZ1 356 aa1.64□□□□□ -2.15
VPS13A-209ENST00000467124 STRCP1A6NGW2 1772 aa1.64□□□□□ -2.15
VPS13A-209ENST00000467124 NCOA1Q15788 1441 aa1.64□□□□□ -2.15
VPS13A-209ENST00000467124 RTL1A6NKG5 1358 aa1.63□□□□□ -2.15
VPS13A-209ENST00000467124 TRGV2A0A075B6R0 118 aa1.63□□□□□ -2.15
VPS13A-209ENST00000467124 TRAV1-1A0A0B4J248 108 aa1.63□□□□□ -2.15
VPS13A-209ENST00000467124 CYB5BO43169 146 aa1.63□□□□□ -2.15
VPS13A-209ENST00000467124 SULT1B1O43704 296 aa1.63□□□□□ -2.15
VPS13A-209ENST00000467124 HTR1AP08908 422 aa1.63□□□□□ -2.15
VPS13A-209ENST00000467124 METTL15P1P0C7V9 234 aa1.63□□□□□ -2.15
VPS13A-209ENST00000467124 GNG10P50151 68 aa1.63□□□□□ -2.15
VPS13A-209ENST00000467124 PIGPP57054 158 aa1.63□□□□□ -2.15
VPS13A-209ENST00000467124 RHEBQ15382 184 aa1.63□□□□□ -2.15
VPS13A-209ENST00000467124 FP248Q71RG6 208 aaPredicted RBP1.63□□□□□ -2.15
VPS13A-209ENST00000467124 TRAPPC6BQ86SZ2 158 aa1.63□□□□□ -2.15
VPS13A-209ENST00000467124 AQP3Q92482 292 aa1.63□□□□□ -2.15
VPS13A-209ENST00000467124 GID8Q9NWU2 228 aa1.63□□□□□ -2.15
VPS13A-209ENST00000467124 LHFPL6Q9Y693 200 aa1.63□□□□□ -2.15
VPS13A-209ENST00000467124 SETD5Q9C0A6 1442 aa1.63□□□□□ -2.15
VPS13A-209ENST00000467124 MDC1Q14676 2089 aaKnown RBP1.63□□□□□ -2.15
VPS13A-209ENST00000467124 DOCK3Q8IZD9 2030 aa1.62□□□□□ -2.15
VPS13A-209ENST00000467124 TONSLQ96HA7 1378 aa1.62□□□□□ -2.15
VPS13A-209ENST00000467124 TOPBP1Q92547 1522 aa1.62□□□□□ -2.15
VPS13A-209ENST00000467124 J3QKU1 62 aa1.62□□□□□ -2.15
VPS13A-209ENST00000467124 CTSDP07339 412 aaPredicted RBP1.62□□□□□ -2.15
VPS13A-209ENST00000467124 KRTAP12-4P60329 112 aa1.62□□□□□ -2.15
VPS13A-209ENST00000467124 RPL19P84098 196 aaKnown RBP1.62□□□□□ -2.15
VPS13A-209ENST00000467124 ELOBQ15370 118 aa1.62□□□□□ -2.15
VPS13A-209ENST00000467124 Q1T7F1 81 aa1.62□□□□□ -2.15
VPS13A-209ENST00000467124 RNASE10Q5GAN6 216 aaKnown RBP1.62□□□□□ -2.15
VPS13A-209ENST00000467124 C15orf53Q8NAA6 179 aa1.62□□□□□ -2.15
VPS13A-209ENST00000467124 ADAT3Q96EY9 351 aaPredicted RBP1.62□□□□□ -2.15
VPS13A-209ENST00000467124 HOPXQ9BPY8 73 aaPredicted RBP1.62□□□□□ -2.15
VPS13A-209ENST00000467124 SLC50A1Q9BRV3 221 aa1.62□□□□□ -2.15
VPS13A-209ENST00000467124 BAZ2BQ9UIF8 2168 aaKnown RBP1.62□□□□□ -2.15
VPS13A-209ENST00000467124 ZNF106Q9H2Y7 1883 aaKnown RBP1.61□□□□□ -2.15
VPS13A-209ENST00000467124 MIA2Q96PC5 1412 aa1.61□□□□□ -2.15
VPS13A-209ENST00000467124 TRBV6-5A0A0K0K1A5 114 aa1.61□□□□□ -2.15
VPS13A-209ENST00000467124 BANF1O75531 89 aa1.61□□□□□ -2.15
VPS13A-209ENST00000467124 OR2B3O76000 313 aa1.61□□□□□ -2.15
VPS13A-209ENST00000467124 ZNF705BP0CI00 300 aaPredicted RBP1.61□□□□□ -2.15
VPS13A-209ENST00000467124 MGST1P10620 155 aaKnown RBP1.61□□□□□ -2.15
VPS13A-209ENST00000467124 AKR1C3P42330 323 aa1.61□□□□□ -2.15
VPS13A-209ENST00000467124 ZNF846Q147U1 533 aa1.61□□□□□ -2.15
VPS13A-209ENST00000467124 LINC00471Q8N535 108 aa1.61□□□□□ -2.15
VPS13A-209ENST00000467124 FAM172AQ8WUF8 416 aa1.61□□□□□ -2.15
VPS13A-209ENST00000467124 MBD3L1Q8WWY6 194 aa1.61□□□□□ -2.15
VPS13A-209ENST00000467124 GPR146Q96CH1 333 aa1.61□□□□□ -2.15
VPS13A-209ENST00000467124 C2orf50Q96LR7 162 aa1.61□□□□□ -2.15
VPS13A-209ENST00000467124 MRPL32Q9BYC8 188 aaKnown RBP1.61□□□□□ -2.15
VPS13A-209ENST00000467124 NEO1Q92859 1461 aa1.61□□□□□ -2.15
VPS13A-209ENST00000467124 PLXND1Q9Y4D7 1925 aa1.6□□□□□ -2.15
VPS13A-209ENST00000467124 FREM1Q5H8C1 2179 aa1.6□□□□□ -2.15
VPS13A-209ENST00000467124 A0A087X0T9 212 aa1.6□□□□□ -2.15
VPS13A-209ENST00000467124 TRAV4A0A0B4J268 109 aa1.6□□□□□ -2.15
VPS13A-209ENST00000467124 IGKV1-9A0A0C4DH69 117 aa1.6□□□□□ -2.15
VPS13A-209ENST00000467124 A0A0D9SG52 128 aa1.6□□□□□ -2.15
VPS13A-209ENST00000467124 TMEM238C9JI98 176 aa1.6□□□□□ -2.15
VPS13A-209ENST00000467124 J3QRK9 145 aa1.6□□□□□ -2.15
VPS13A-209ENST00000467124 ATG12O94817 140 aa1.6□□□□□ -2.15
VPS13A-209ENST00000467124 OR5F1O95221 314 aa1.6□□□□□ -2.15
VPS13A-209ENST00000467124 OR4E1P0C645 316 aa1.6□□□□□ -2.15
VPS13A-209ENST00000467124 ASAH2BP0C7U1 165 aa1.6□□□□□ -2.15
VPS13A-209ENST00000467124 TAS2R41P59536 307 aa1.6□□□□□ -2.15
VPS13A-209ENST00000467124 YPEL3P61236 119 aaPredicted RBP1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms