RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 ATP5SQ99766 215 aa5.34□□□□□ -1.55
CPS1-202ENST00000417946 PARD6GQ9BYG4 376 aaPredicted RBP5.34□□□□□ -1.55
CPS1-202ENST00000417946 SLC25A31Q9H0C2 315 aa5.34□□□□□ -1.55
CPS1-202ENST00000417946 HIPK2Q9H2X6 1198 aa5.34□□□□□ -1.55
CPS1-202ENST00000417946 ENY2Q9NPA8 101 aa5.34□□□□□ -1.55
CPS1-202ENST00000417946 PARP11Q9NR21 331 aa5.34□□□□□ -1.55
CPS1-202ENST00000417946 LINC00527Q9UJ94 153 aa5.34□□□□□ -1.55
CPS1-202ENST00000417946 WDR83OSQ9Y284 106 aa5.34□□□□□ -1.55
CPS1-202ENST00000417946 LSM4Q9Y4Z0 139 aaKnown RBP5.34□□□□□ -1.55
CPS1-202ENST00000417946 TRBV9A0A0B4J1U6 114 aa5.33□□□□□ -1.56
CPS1-202ENST00000417946 TRAV41A0A0B4J266 112 aa5.33□□□□□ -1.56
CPS1-202ENST00000417946 KANTRA0A1W2PQU2 76 aa5.33□□□□□ -1.56
CPS1-202ENST00000417946 TAAR5O14804 337 aa5.33□□□□□ -1.56
CPS1-202ENST00000417946 RGS13O14921 159 aa5.33□□□□□ -1.56
CPS1-202ENST00000417946 NDUFB8O95169 186 aa5.33□□□□□ -1.56
CPS1-202ENST00000417946 OR8U8P0C7N1 319 aa5.33□□□□□ -1.56
CPS1-202ENST00000417946 RUNX1Q01196 453 aa5.33□□□□□ -1.56
CPS1-202ENST00000417946 ECSCRQ19T08 205 aa5.33□□□□□ -1.56
CPS1-202ENST00000417946 AKIRIN2Q53H80 203 aa5.33□□□□□ -1.56
CPS1-202ENST00000417946 UNQ5815/PRO19632Q6UWF5 114 aa5.33□□□□□ -1.56
CPS1-202ENST00000417946 C10orf99Q6UWK7 81 aa5.33□□□□□ -1.56
CPS1-202ENST00000417946 Q6ZSV7 163 aa5.33□□□□□ -1.56
CPS1-202ENST00000417946 SLC16A13Q7RTY0 426 aa5.33□□□□□ -1.56
CPS1-202ENST00000417946 SLC35E3Q7Z769 313 aa5.33□□□□□ -1.56
CPS1-202ENST00000417946 SLC51BQ86UW2 128 aa5.33□□□□□ -1.56
CPS1-202ENST00000417946 UBAC2Q8NBM4 344 aa5.33□□□□□ -1.56
CPS1-202ENST00000417946 OR5T1Q8NG75 326 aa5.33□□□□□ -1.56
CPS1-202ENST00000417946 OR1S2Q8NGQ3 325 aa5.33□□□□□ -1.56
CPS1-202ENST00000417946 ABHD5Q8WTS1 349 aa5.33□□□□□ -1.56
CPS1-202ENST00000417946 GINS3Q9BRX5 216 aa5.33□□□□□ -1.56
CPS1-202ENST00000417946 TMEM147Q9BVK8 224 aa5.33□□□□□ -1.56
CPS1-202ENST00000417946 ZNF471Q9BX82 626 aaPredicted RBP5.33□□□□□ -1.56
CPS1-202ENST00000417946 GON7Q9BXV9 100 aa5.33□□□□□ -1.56
CPS1-202ENST00000417946 WNT10AQ9GZT5 417 aa5.33□□□□□ -1.56
CPS1-202ENST00000417946 SH3BGRL3Q9H299 93 aa5.33□□□□□ -1.56
CPS1-202ENST00000417946 SERTAD4Q9NUC0 356 aa5.33□□□□□ -1.56
CPS1-202ENST00000417946 CUBNO60494 3623 aa5.33□□□□□ -1.56
CPS1-202ENST00000417946 SETD2Q9BYW2 2564 aaPredicted RBP5.32□□□□□ -1.56
CPS1-202ENST00000417946 IGHV3-21A0A0B4J1V1 117 aa5.32□□□□□ -1.56
CPS1-202ENST00000417946 UBE2L5PA0A1B0GUS4 154 aa5.32□□□□□ -1.56
CPS1-202ENST00000417946 RPS10-NUDT3A0A1W2PQS6 291 aa5.32□□□□□ -1.56
CPS1-202ENST00000417946 BTBD17A6NE02 478 aa5.32□□□□□ -1.56
CPS1-202ENST00000417946 MFSD2BA6NFX1 497 aa5.32□□□□□ -1.56
CPS1-202ENST00000417946 FNDC10F2Z333 226 aa5.32□□□□□ -1.56
CPS1-202ENST00000417946 BRI3O95415 125 aa5.32□□□□□ -1.56
CPS1-202ENST00000417946 IGHV3-48P01763 117 aa5.32□□□□□ -1.56
CPS1-202ENST00000417946 ATP6V0CP27449 155 aa5.32□□□□□ -1.56
CPS1-202ENST00000417946 GPX4P36969 197 aaPredicted RBP5.32□□□□□ -1.56
CPS1-202ENST00000417946 NUP62P37198 522 aaPredicted RBP5.32□□□□□ -1.56
CPS1-202ENST00000417946 SNCAP37840 140 aa5.32□□□□□ -1.56
CPS1-202ENST00000417946 UBA52P62987 128 aaKnown RBP5.32□□□□□ -1.56
CPS1-202ENST00000417946 HBG1P69891 147 aa5.32□□□□□ -1.56
CPS1-202ENST00000417946 HBG2P69892 147 aa5.32□□□□□ -1.56
CPS1-202ENST00000417946 ERHP84090 104 aaKnown RBP5.32□□□□□ -1.56
CPS1-202ENST00000417946 SRSF2Q01130 221 aaKnown RBP5.32□□□□□ -1.56
CPS1-202ENST00000417946 EXOSC2Q13868 293 aaKnown RBP5.32□□□□□ -1.56
CPS1-202ENST00000417946 KIAA0141Q14154 515 aaPredicted RBP5.32□□□□□ -1.56
CPS1-202ENST00000417946 GAMTQ14353 236 aa5.32□□□□□ -1.56
CPS1-202ENST00000417946 C9orf152Q5JTZ5 239 aa5.32□□□□□ -1.56
CPS1-202ENST00000417946 TEX261Q6UWH6 196 aa5.32□□□□□ -1.56
CPS1-202ENST00000417946 TMEM182Q6ZP80 229 aaPredicted RBP5.32□□□□□ -1.56
CPS1-202ENST00000417946 BAP18Q8IXM2 172 aa5.32□□□□□ -1.56
CPS1-202ENST00000417946 OR10P1Q8NGE3 313 aa5.32□□□□□ -1.56
CPS1-202ENST00000417946 OR2T6Q8NHC8 308 aa5.32□□□□□ -1.56
CPS1-202ENST00000417946 MYOZ3Q8TDC0 251 aa5.32□□□□□ -1.56
CPS1-202ENST00000417946 RNASEH2CQ8TDP1 164 aaKnown RBP5.32□□□□□ -1.56
CPS1-202ENST00000417946 PINX1Q96BK5 328 aaKnown RBP5.32□□□□□ -1.56
CPS1-202ENST00000417946 MGST2Q99735 147 aa5.32□□□□□ -1.56
CPS1-202ENST00000417946 GGACTQ9BVM4 153 aa5.32□□□□□ -1.56
CPS1-202ENST00000417946 WDR61Q9GZS3 305 aaKnown RBP5.32□□□□□ -1.56
CPS1-202ENST00000417946 ZC4H2Q9NQZ6 224 aa5.32□□□□□ -1.56
CPS1-202ENST00000417946 UQCC1Q9NVA1 299 aa5.32□□□□□ -1.56
CPS1-202ENST00000417946 PAIP2BQ9ULR5 123 aaKnown RBP5.32□□□□□ -1.56
CPS1-202ENST00000417946 JMJD1CQ15652 2540 aa5.31□□□□□ -1.56
CPS1-202ENST00000417946 AP4M1O00189 453 aa5.31□□□□□ -1.56
CPS1-202ENST00000417946 TSPAN9O75954 239 aa5.31□□□□□ -1.56
CPS1-202ENST00000417946 OR2J3O76001 311 aa5.31□□□□□ -1.56
CPS1-202ENST00000417946 DFFBO76075 338 aa5.31□□□□□ -1.56
CPS1-202ENST00000417946 YIF1AO95070 293 aa5.31□□□□□ -1.56
CPS1-202ENST00000417946 TSPAN15O95858 294 aa5.31□□□□□ -1.56
CPS1-202ENST00000417946 MT-CO2P00403 227 aa5.31□□□□□ -1.56
CPS1-202ENST00000417946 IFNA4P05014 189 aa5.31□□□□□ -1.56
CPS1-202ENST00000417946 LINC00869P0C866 280 aa5.31□□□□□ -1.56
CPS1-202ENST00000417946 SPP1P10451 314 aa5.31□□□□□ -1.56
CPS1-202ENST00000417946 RAB11AP62491 216 aa5.31□□□□□ -1.56
CPS1-202ENST00000417946 RPP30P78346 268 aaKnown RBP5.31□□□□□ -1.56
CPS1-202ENST00000417946 ATP6V1FQ16864 119 aa5.31□□□□□ -1.56
CPS1-202ENST00000417946 FAM74A1Q5RGS3 127 aa5.31□□□□□ -1.56
CPS1-202ENST00000417946 ACSM6Q6P461 480 aa5.31□□□□□ -1.56
CPS1-202ENST00000417946 ALKAL2Q6UX46 152 aa5.31□□□□□ -1.56
CPS1-202ENST00000417946 CENPVQ7Z7K6 275 aaPredicted RBP5.31□□□□□ -1.56
CPS1-202ENST00000417946 THAP8Q8NA92 274 aa5.31□□□□□ -1.56
CPS1-202ENST00000417946 HSD17B11Q8NBQ5 300 aa5.31□□□□□ -1.56
CPS1-202ENST00000417946 ZNF680Q8NEM1 530 aa5.31□□□□□ -1.56
CPS1-202ENST00000417946 ZNF418Q8TF45 676 aaPredicted RBP5.31□□□□□ -1.56
CPS1-202ENST00000417946 SCARB1Q8WTV0 552 aa5.31□□□□□ -1.56
CPS1-202ENST00000417946 TMED6Q8WW62 240 aa5.31□□□□□ -1.56
CPS1-202ENST00000417946 CACNG8Q8WXS5 425 aa5.31□□□□□ -1.56
CPS1-202ENST00000417946 CCDC140Q96MF4 163 aa5.31□□□□□ -1.56
CPS1-202ENST00000417946 TMEM68Q96MH6 324 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms