RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 SEPSECSQ9HD40 501 aaKnown RBP8.04□□□□□ -1.12
SNX1-202ENST00000380285 IGLV3-19P01714 112 aa8.03□□□□□ -1.12
SNX1-202ENST00000380285 PRCDQ00LT1 54 aa8.03□□□□□ -1.12
SNX1-202ENST00000380285 RNF182Q8N6D2 247 aa8.03□□□□□ -1.12
SNX1-202ENST00000380285 IGKCP01834 107 aa8.03□□□□□ -1.12
SNX1-202ENST00000380285 GAGE13Q4V321 117 aa8.03□□□□□ -1.12
SNX1-202ENST00000380285 FAM57AQ8TBR7 257 aa8.03□□□□□ -1.12
SNX1-202ENST00000380285 NEUROG3Q9Y4Z2 214 aa8.03□□□□□ -1.12
SNX1-202ENST00000380285 SNRPCP09234 159 aaKnown RBP8.03□□□□□ -1.12
SNX1-202ENST00000380285 RHOGP84095 191 aa8.03□□□□□ -1.12
SNX1-202ENST00000380285 FGF11Q92914 225 aa8.03□□□□□ -1.12
SNX1-202ENST00000380285 TIMP4Q99727 224 aa8.03□□□□□ -1.12
SNX1-202ENST00000380285 FTH1P19P0C7X4 201 aa8.03□□□□□ -1.12
SNX1-202ENST00000380285 EFNB3Q15768 340 aa8.03□□□□□ -1.12
SNX1-202ENST00000380285 SAMD5Q5TGI4 173 aa8.03□□□□□ -1.12
SNX1-202ENST00000380285 FAM74A4Q5TZK3 123 aa8.03□□□□□ -1.12
SNX1-202ENST00000380285 ARPC1AQ92747 370 aa8.03□□□□□ -1.12
SNX1-202ENST00000380285 IFI27P40305 119 aaPredicted RBP8.03□□□□□ -1.12
SNX1-202ENST00000380285 LDLRAD2Q5SZI1 272 aa8.03□□□□□ -1.12
SNX1-202ENST00000380285 NEU4Q8WWR8 484 aaPredicted RBP8.03□□□□□ -1.12
SNX1-202ENST00000380285 RNASE7Q9H1E1 156 aaKnown RBP8.03□□□□□ -1.12
SNX1-202ENST00000380285 FNDC10F2Z333 226 aa8.03□□□□□ -1.12
SNX1-202ENST00000380285 DUX5Q96PT3 197 aa8.03□□□□□ -1.12
SNX1-202ENST00000380285 IGLV3-12A0A075B6K2 115 aa8.03□□□□□ -1.12
SNX1-202ENST00000380285 TBX6O95947 436 aaPredicted RBP8.03□□□□□ -1.12
SNX1-202ENST00000380285 ZIC3O60481 467 aa8.02□□□□□ -1.13
SNX1-202ENST00000380285 LYPD3O95274 346 aa8.02□□□□□ -1.13
SNX1-202ENST00000380285 ZNF883P0CG24 379 aa8.02□□□□□ -1.13
SNX1-202ENST00000380285 CYTL1Q9NRR1 136 aa8.02□□□□□ -1.13
SNX1-202ENST00000380285 FAM181BA6NEQ2 426 aa8.02□□□□□ -1.13
SNX1-202ENST00000380285 PROB1E7EW31 1015 aa8.02□□□□□ -1.13
SNX1-202ENST00000380285 OCC1Q8TAD7 63 aa8.02□□□□□ -1.13
SNX1-202ENST00000380285 DPH3Q96FX2 82 aa8.02□□□□□ -1.13
SNX1-202ENST00000380285 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.02□□□□□ -1.13
SNX1-202ENST00000380285 LDLRAD4O15165 306 aa8.02□□□□□ -1.13
SNX1-202ENST00000380285 CFPP27918 469 aa8.02□□□□□ -1.13
SNX1-202ENST00000380285 MEGF9Q9H1U4 602 aa8.02□□□□□ -1.13
SNX1-202ENST00000380285 NHP2Q9NX24 153 aaKnown RBP8.02□□□□□ -1.13
SNX1-202ENST00000380285 FOXA2Q9Y261 457 aaPredicted RBP8.02□□□□□ -1.13
SNX1-202ENST00000380285 M0R381 172 aa8.02□□□□□ -1.13
SNX1-202ENST00000380285 PDLIM4P50479 330 aa8.02□□□□□ -1.13
SNX1-202ENST00000380285 CD69Q07108 199 aa8.02□□□□□ -1.13
SNX1-202ENST00000380285 ZFAND6Q6FIF0 208 aa8.02□□□□□ -1.13
SNX1-202ENST00000380285 ZNRF1Q8ND25 227 aa8.02□□□□□ -1.13
SNX1-202ENST00000380285 OR13A1Q8NGR1 328 aa8.02□□□□□ -1.13
SNX1-202ENST00000380285 IFI27L1Q96BM0 104 aa8.02□□□□□ -1.13
SNX1-202ENST00000380285 ABCA1O95477 2261 aa8.02□□□□□ -1.13
SNX1-202ENST00000380285 TNS1Q9HBL0 1735 aaKnown RBP8.02□□□□□ -1.13
SNX1-202ENST00000380285 PEAR1Q5VY43 1037 aaPredicted RBP8.02□□□□□ -1.13
SNX1-202ENST00000380285 LEAP2Q969E1 77 aa8.02□□□□□ -1.13
SNX1-202ENST00000380285 FNDC4Q9H6D8 234 aaPredicted RBP8.02□□□□□ -1.13
SNX1-202ENST00000380285 PAQR4Q8N4S7 273 aaPredicted RBP8.01□□□□□ -1.13
SNX1-202ENST00000380285 ZNF479Q96JC4 524 aa8.01□□□□□ -1.13
SNX1-202ENST00000380285 OVOL2Q9BRP0 275 aa8.01□□□□□ -1.13
SNX1-202ENST00000380285 PLXNA3P51805 1871 aa8.01□□□□□ -1.13
SNX1-202ENST00000380285 TRAV8-4A0A0B4J246 113 aa8.01□□□□□ -1.13
SNX1-202ENST00000380285 NDUFA3O95167 84 aa8.01□□□□□ -1.13
SNX1-202ENST00000380285 PLAURQ03405 335 aa8.01□□□□□ -1.13
SNX1-202ENST00000380285 MORN2Q502X0 79 aa8.01□□□□□ -1.13
SNX1-202ENST00000380285 Q6ZS49 121 aa8.01□□□□□ -1.13
SNX1-202ENST00000380285 C8orf46Q8TAG6 207 aa8.01□□□□□ -1.13
SNX1-202ENST00000380285 OR13C6PQ8NH95 151 aa8.01□□□□□ -1.13
SNX1-202ENST00000380285 FBXL7Q9UJT9 491 aa8.01□□□□□ -1.13
SNX1-202ENST00000380285 TRBV6-6A0A0A6YYG2 114 aa8.01□□□□□ -1.13
SNX1-202ENST00000380285 TRAV21A0A0B4J279 112 aa8.01□□□□□ -1.13
SNX1-202ENST00000380285 A0A1W2PR77 199 aa8.01□□□□□ -1.13
SNX1-202ENST00000380285 MYOD1P15172 320 aa8.01□□□□□ -1.13
SNX1-202ENST00000380285 PPP1R32Q7Z5V6 425 aa8.01□□□□□ -1.13
SNX1-202ENST00000380285 ST6GALNAC6Q969X2 333 aa8.01□□□□□ -1.13
SNX1-202ENST00000380285 WBP1Q96G27 269 aa8.01□□□□□ -1.13
SNX1-202ENST00000380285 IGKV1D-43A0A0B4J1Z2 117 aa8.01□□□□□ -1.13
SNX1-202ENST00000380285 TMPRSS3P57727 454 aa8.01□□□□□ -1.13
SNX1-202ENST00000380285 FAM71F2Q6NXP2 309 aa8.01□□□□□ -1.13
SNX1-202ENST00000380285 DOPEY2Q9Y3R5 2298 aa8.01□□□□□ -1.13
SNX1-202ENST00000380285 GTF3C1Q12789 2109 aa8.01□□□□□ -1.13
SNX1-202ENST00000380285 TMEM238C9JI98 176 aa8.01□□□□□ -1.13
SNX1-202ENST00000380285 UBE2V1Q13404 147 aa8.01□□□□□ -1.13
SNX1-202ENST00000380285 GFI1Q99684 422 aa8.01□□□□□ -1.13
SNX1-202ENST00000380285 SPAG8Q99932 426 aaPredicted RBP8.01□□□□□ -1.13
SNX1-202ENST00000380285 CECR9P0C854 216 aa8□□□□□ -1.13
SNX1-202ENST00000380285 PRR7Q8TB68 274 aa8□□□□□ -1.13
SNX1-202ENST00000380285 WFDC1Q9HC57 220 aa8□□□□□ -1.13
SNX1-202ENST00000380285 PGPEP1Q9NXJ5 209 aa8□□□□□ -1.13
SNX1-202ENST00000380285 UMODP07911 640 aa8□□□□□ -1.13
SNX1-202ENST00000380285 ZIC4Q8N9L1 334 aa8□□□□□ -1.13
SNX1-202ENST00000380285 TET1Q8NFU7 2136 aa8□□□□□ -1.13
SNX1-202ENST00000380285 IGHV2OR16-5A0A0B4J2B6 119 aa8□□□□□ -1.13
SNX1-202ENST00000380285 SLC25A20O43772 301 aa8□□□□□ -1.13
SNX1-202ENST00000380285 TRGV3P03979 118 aa8□□□□□ -1.13
SNX1-202ENST00000380285 SAA1P0DJI8 122 aaPredicted RBP8□□□□□ -1.13
SNX1-202ENST00000380285 TFPI2P48307 235 aa8□□□□□ -1.13
SNX1-202ENST00000380285 CXCL1P09341 107 aa8□□□□□ -1.13
SNX1-202ENST00000380285 DUTP33316 252 aaKnown RBP8□□□□□ -1.13
SNX1-202ENST00000380285 RPRMLQ8N4K4 120 aa8□□□□□ -1.13
SNX1-202ENST00000380285 CHTOPQ9Y3Y2 248 aaKnown RBP8□□□□□ -1.13
SNX1-202ENST00000380285 SAA2-SAA4A0A096LPE2 208 aa8□□□□□ -1.13
SNX1-202ENST00000380285 TRBV7-9A0A0J9YWB2 115 aa8□□□□□ -1.13
SNX1-202ENST00000380285 EFEMP2O95967 443 aa8□□□□□ -1.13
SNX1-202ENST00000380285 SAA2P0DJI9 122 aaPredicted RBP8□□□□□ -1.13
SNX1-202ENST00000380285 MESP2Q0VG99 397 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 316.9 ms