RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 CRPP02741 224 aa1.35□□□□□ -2.19
RNU6-28P-201ENST00000362378 SHBGP04278 402 aa1.35□□□□□ -2.19
RNU6-28P-201ENST00000362378 PRB1P04280 392 aa1.35□□□□□ -2.19
RNU6-28P-201ENST00000362378 RPSAP08865 295 aaKnown RBP1.35□□□□□ -2.19
RNU6-28P-201ENST00000362378 Q6Q795 121 aa1.35□□□□□ -2.19
RNU6-28P-201ENST00000362378 Q6ZQT0 140 aa1.35□□□□□ -2.19
RNU6-28P-201ENST00000362378 ZNF826PQ6ZT77 177 aa1.35□□□□□ -2.19
RNU6-28P-201ENST00000362378 FP248Q71RG6 208 aaPredicted RBP1.35□□□□□ -2.19
RNU6-28P-201ENST00000362378 AAED1Q7RTV5 226 aa1.35□□□□□ -2.19
RNU6-28P-201ENST00000362378 HIST3H2BBQ8N257 126 aa1.35□□□□□ -2.19
RNU6-28P-201ENST00000362378 OR10X1Q8NGY0 326 aa1.35□□□□□ -2.19
RNU6-28P-201ENST00000362378 DNAJC9Q8WXX5 260 aa1.35□□□□□ -2.19
RNU6-28P-201ENST00000362378 GINS4Q9BRT9 223 aa1.35□□□□□ -2.19
RNU6-28P-201ENST00000362378 PARVBQ9HBI1 364 aa1.35□□□□□ -2.19
RNU6-28P-201ENST00000362378 TVP23BQ9NYZ1 205 aa1.35□□□□□ -2.19
RNU6-28P-201ENST00000362378 CAMSAP1Q5T5Y3 1602 aa1.35□□□□□ -2.19
RNU6-28P-201ENST00000362378 A0A0D9SG52 128 aa1.34□□□□□ -2.19
RNU6-28P-201ENST00000362378 TRBV6-5A0A0K0K1A5 114 aa1.34□□□□□ -2.19
RNU6-28P-201ENST00000362378 TCL1BO95988 128 aa1.34□□□□□ -2.19
RNU6-28P-201ENST00000362378 CTSDP07339 412 aaPredicted RBP1.34□□□□□ -2.19
RNU6-28P-201ENST00000362378 S100A4P26447 101 aaKnown RBP1.34□□□□□ -2.19
RNU6-28P-201ENST00000362378 MAGEA12P43365 314 aa1.34□□□□□ -2.19
RNU6-28P-201ENST00000362378 YPEL3P61236 119 aaPredicted RBP1.34□□□□□ -2.19
RNU6-28P-201ENST00000362378 KRTAP21-3Q3LHN1 58 aa1.34□□□□□ -2.19
RNU6-28P-201ENST00000362378 LINC01554Q52M75 96 aa1.34□□□□□ -2.19
RNU6-28P-201ENST00000362378 TRAPPC6BQ86SZ2 158 aa1.34□□□□□ -2.19
RNU6-28P-201ENST00000362378 WFDC11Q8NEX6 87 aa1.34□□□□□ -2.19
RNU6-28P-201ENST00000362378 OR11H6Q8NGC7 330 aa1.34□□□□□ -2.19
RNU6-28P-201ENST00000362378 OR52R1Q8NGF1 315 aa1.34□□□□□ -2.19
RNU6-28P-201ENST00000362378 SLC25A40Q8TBP6 338 aa1.34□□□□□ -2.19
RNU6-28P-201ENST00000362378 GNPDA2Q8TDQ7 276 aa1.34□□□□□ -2.19
RNU6-28P-201ENST00000362378 NAA38Q9BRA0 125 aaKnown RBP1.34□□□□□ -2.19
RNU6-28P-201ENST00000362378 MIXL1Q9H2W2 232 aa1.34□□□□□ -2.19
RNU6-28P-201ENST00000362378 ARL5AQ9Y689 179 aa1.34□□□□□ -2.19
RNU6-28P-201ENST00000362378 SORL1Q92673 2214 aa1.34□□□□□ -2.2
RNU6-28P-201ENST00000362378 CR1P17927 2039 aa1.33□□□□□ -2.2
RNU6-28P-201ENST00000362378 J3QRK9 145 aa1.33□□□□□ -2.2
RNU6-28P-201ENST00000362378 SMIM17P0DL12 118 aa1.33□□□□□ -2.2
RNU6-28P-201ENST00000362378 CRYGAP11844 174 aa1.33□□□□□ -2.2
RNU6-28P-201ENST00000362378 CASP1P29466 404 aa1.33□□□□□ -2.2
RNU6-28P-201ENST00000362378 ZNF846Q147U1 533 aa1.33□□□□□ -2.2
RNU6-28P-201ENST00000362378 KHDC3LQ587J8 217 aa1.33□□□□□ -2.2
RNU6-28P-201ENST00000362378 LCA10Q71F78 164 aa1.33□□□□□ -2.2
RNU6-28P-201ENST00000362378 PXT1Q8NFP0 134 aa1.33□□□□□ -2.2
RNU6-28P-201ENST00000362378 OR4D11Q8NGI4 311 aa1.33□□□□□ -2.2
RNU6-28P-201ENST00000362378 OR5A1Q8NGJ0 315 aa1.33□□□□□ -2.2
RNU6-28P-201ENST00000362378 MRPL32Q9BYC8 188 aaKnown RBP1.33□□□□□ -2.2
RNU6-28P-201ENST00000362378 CYSTM1Q9H1C7 97 aa1.33□□□□□ -2.2
RNU6-28P-201ENST00000362378 OSTCQ9NRP0 149 aa1.33□□□□□ -2.2
RNU6-28P-201ENST00000362378 ARMC1Q9NVT9 282 aa1.33□□□□□ -2.2
RNU6-28P-201ENST00000362378 FAM32AQ9Y421 112 aaKnown RBP1.33□□□□□ -2.2
RNU6-28P-201ENST00000362378 SETD5Q9C0A6 1442 aa1.32□□□□□ -2.2
RNU6-28P-201ENST00000362378 HEATR5AQ86XA9 2040 aa1.32□□□□□ -2.2
RNU6-28P-201ENST00000362378 TRAV4A0A0B4J268 109 aa1.32□□□□□ -2.2
RNU6-28P-201ENST00000362378 UBBP0CG47 229 aa1.32□□□□□ -2.2
RNU6-28P-201ENST00000362378 BASP1P80723 227 aaKnown RBP1.32□□□□□ -2.2
RNU6-28P-201ENST00000362378 RHEBQ15382 184 aa1.32□□□□□ -2.2
RNU6-28P-201ENST00000362378 DPPA3Q6W0C5 159 aa1.32□□□□□ -2.2
RNU6-28P-201ENST00000362378 S100A7AQ86SG5 101 aa1.32□□□□□ -2.2
RNU6-28P-201ENST00000362378 RPS19BP1Q86WX3 136 aaKnown RBP1.32□□□□□ -2.2
RNU6-28P-201ENST00000362378 GPR146Q96CH1 333 aa1.32□□□□□ -2.2
RNU6-28P-201ENST00000362378 C9orf16Q9BUW7 83 aa1.32□□□□□ -2.2
RNU6-28P-201ENST00000362378 ENY2Q9NPA8 101 aa1.32□□□□□ -2.2
RNU6-28P-201ENST00000362378 OPTCQ9UBM4 332 aa1.32□□□□□ -2.2
RNU6-28P-201ENST00000362378 IGKV1D-42A0A075B6H8 117 aa1.31□□□□□ -2.2
RNU6-28P-201ENST00000362378 FUOMA2VDF0 154 aa1.31□□□□□ -2.2
RNU6-28P-201ENST00000362378 MRPS14O60783 128 aaKnown RBP1.31□□□□□ -2.2
RNU6-28P-201ENST00000362378 OR5F1O95221 314 aa1.31□□□□□ -2.2
RNU6-28P-201ENST00000362378 FKBP2P26885 142 aaKnown RBP1.31□□□□□ -2.2
RNU6-28P-201ENST00000362378 ERP29P30040 261 aaKnown RBP1.31□□□□□ -2.2
RNU6-28P-201ENST00000362378 HSPE1P61604 102 aaKnown RBP1.31□□□□□ -2.2
RNU6-28P-201ENST00000362378 TAF1AQ15573 450 aaPredicted RBP1.31□□□□□ -2.2
RNU6-28P-201ENST00000362378 KRTAP21-2Q3LI59 83 aa1.31□□□□□ -2.2
RNU6-28P-201ENST00000362378 SPANXN5Q5MJ07 72 aa1.31□□□□□ -2.2
RNU6-28P-201ENST00000362378 DHRS4L2Q6PKH6 230 aa1.31□□□□□ -2.2
RNU6-28P-201ENST00000362378 GOLT1AQ6ZVE7 132 aa1.31□□□□□ -2.2
RNU6-28P-201ENST00000362378 DEFB119Q8N690 84 aa1.31□□□□□ -2.2
RNU6-28P-201ENST00000362378 OR4E2Q8NGC2 313 aa1.31□□□□□ -2.2
RNU6-28P-201ENST00000362378 ADAT3Q96EY9 351 aaPredicted RBP1.31□□□□□ -2.2
RNU6-28P-201ENST00000362378 PHB2Q99623 299 aa1.31□□□□□ -2.2
RNU6-28P-201ENST00000362378 TMEM133Q9H2Q1 129 aa1.31□□□□□ -2.2
RNU6-28P-201ENST00000362378 EPDR1Q9UM22 224 aa1.31□□□□□ -2.2
RNU6-28P-201ENST00000362378 MED1Q15648 1581 aaPredicted RBP1.3□□□□□ -2.2
RNU6-28P-201ENST00000362378 CCDC88CQ9P219 2028 aa1.3□□□□□ -2.2
RNU6-28P-201ENST00000362378 TRBV19A0A075B6N1 114 aa1.3□□□□□ -2.2
RNU6-28P-201ENST00000362378 A0A087X0T9 212 aa1.3□□□□□ -2.2
RNU6-28P-201ENST00000362378 OR4E1P0C645 316 aa1.3□□□□□ -2.2
RNU6-28P-201ENST00000362378 SPI1P17947 270 aa1.3□□□□□ -2.2
RNU6-28P-201ENST00000362378 SRIP30626 198 aa1.3□□□□□ -2.2
RNU6-28P-201ENST00000362378 SERPINB9P50453 376 aa1.3□□□□□ -2.2
RNU6-28P-201ENST00000362378 DEFA3P59666 94 aa1.3□□□□□ -2.2
RNU6-28P-201ENST00000362378 CDC26Q8NHZ8 85 aa1.3□□□□□ -2.2
RNU6-28P-201ENST00000362378 WFDC5Q8TCV5 224 aa1.3□□□□□ -2.2
RNU6-28P-201ENST00000362378 CCDC88AQ3V6T2 1871 aa1.3□□□□□ -2.2
RNU6-28P-201ENST00000362378 ZNF106Q9H2Y7 1883 aaKnown RBP1.3□□□□□ -2.2
RNU6-28P-201ENST00000362378 FMN1Q68DA7 1419 aa1.3□□□□□ -2.2
RNU6-28P-201ENST00000362378 ECM29Q5VYK3 1845 aa1.29□□□□□ -2.2
RNU6-28P-201ENST00000362378 IGKV1-9A0A0C4DH69 117 aa1.29□□□□□ -2.2
RNU6-28P-201ENST00000362378 TMEM212A6NML5 194 aa1.29□□□□□ -2.2
RNU6-28P-201ENST00000362378 OR2T1O43869 369 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms