RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 C15orf61A6NNL5 157 aa10.2□□□□□ -0.78
COLCA1-201ENST00000355430 EFNB3Q15768 340 aa10.2□□□□□ -0.78
COLCA1-201ENST00000355430 RRN3P1Q2M238 152 aa10.2□□□□□ -0.78
COLCA1-201ENST00000355430 TREML4Q6UXN2 200 aa10.2□□□□□ -0.78
COLCA1-201ENST00000355430 TRGV3P03979 118 aa10.2□□□□□ -0.78
COLCA1-201ENST00000355430 Q5PR19 223 aa10.2□□□□□ -0.78
COLCA1-201ENST00000355430 SPATA31B1PQ5VZV4 182 aa10.2□□□□□ -0.78
COLCA1-201ENST00000355430 LINC01551Q86U37 167 aa10.2□□□□□ -0.78
COLCA1-201ENST00000355430 DUX5Q96PT3 197 aa10.2□□□□□ -0.78
COLCA1-201ENST00000355430 A6NNC1 897 aa10.19□□□□□ -0.78
COLCA1-201ENST00000355430 PAX9P55771 341 aa10.19□□□□□ -0.78
COLCA1-201ENST00000355430 LINC00205P59089 165 aa10.19□□□□□ -0.78
COLCA1-201ENST00000355430 COLCA1Q6ZS62 124 aa10.19□□□□□ -0.78
COLCA1-201ENST00000355430 NRN1Q9NPD7 142 aa10.19□□□□□ -0.78
COLCA1-201ENST00000355430 ANOS1P23352 680 aa10.19□□□□□ -0.78
COLCA1-201ENST00000355430 DMRTA1Q5VZB9 504 aa10.19□□□□□ -0.78
COLCA1-201ENST00000355430 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.19□□□□□ -0.78
COLCA1-201ENST00000355430 PEX7O00628 323 aa10.19□□□□□ -0.78
COLCA1-201ENST00000355430 YPEL1O60688 119 aa10.19□□□□□ -0.78
COLCA1-201ENST00000355430 YPEL2Q96QA6 119 aa10.19□□□□□ -0.78
COLCA1-201ENST00000355430 TM4SF20Q53R12 229 aa10.19□□□□□ -0.78
COLCA1-201ENST00000355430 TMEM256Q8N2U0 113 aa10.19□□□□□ -0.78
COLCA1-201ENST00000355430 LINC01356Q8N9X3 169 aa10.19□□□□□ -0.78
COLCA1-201ENST00000355430 SRSF12Q8WXF0 261 aaKnown RBP10.19□□□□□ -0.78
COLCA1-201ENST00000355430 SLC25A15Q9Y619 301 aa10.19□□□□□ -0.78
COLCA1-201ENST00000355430 TMEM189A5PLL7 270 aa10.18□□□□□ -0.78
COLCA1-201ENST00000355430 A6NDN8 102 aa10.18□□□□□ -0.78
COLCA1-201ENST00000355430 J3QR89 54 aa10.18□□□□□ -0.78
COLCA1-201ENST00000355430 HBBP68871 147 aa10.18□□□□□ -0.78
COLCA1-201ENST00000355430 SLC25A34Q6PIV7 304 aa10.18□□□□□ -0.78
COLCA1-201ENST00000355430 C8orf46Q8TAG6 207 aa10.18□□□□□ -0.78
COLCA1-201ENST00000355430 GGTLC1Q9BX51 225 aa10.18□□□□□ -0.78
COLCA1-201ENST00000355430 MUC6Q6W4X9 2439 aa10.18□□□□□ -0.78
COLCA1-201ENST00000355430 IZUMO1RA6ND01 250 aa10.18□□□□□ -0.78
COLCA1-201ENST00000355430 FOXI3A8MTJ6 420 aaPredicted RBP10.18□□□□□ -0.78
COLCA1-201ENST00000355430 IGHV2-70P01814 119 aa10.18□□□□□ -0.78
COLCA1-201ENST00000355430 NMUP48645 174 aa10.18□□□□□ -0.78
COLCA1-201ENST00000355430 TWIST1Q15672 202 aa10.18□□□□□ -0.78
COLCA1-201ENST00000355430 ZNF585BQ52M93 769 aa10.18□□□□□ -0.78
COLCA1-201ENST00000355430 ST6GALNAC6Q969X2 333 aa10.18□□□□□ -0.78
COLCA1-201ENST00000355430 MRPL20Q9BYC9 149 aaKnown RBP10.18□□□□□ -0.78
COLCA1-201ENST00000355430 TRAV40A0A0B4J280 105 aa10.18□□□□□ -0.78
COLCA1-201ENST00000355430 LYNX1G3V0Z9 82 aa10.18□□□□□ -0.78
COLCA1-201ENST00000355430 IGKV1D-33P01593 117 aa10.18□□□□□ -0.78
COLCA1-201ENST00000355430 IGKV1-33P01594 117 aa10.18□□□□□ -0.78
COLCA1-201ENST00000355430 LYNX1P0DP58 116 aa10.18□□□□□ -0.78
COLCA1-201ENST00000355430 PROK2Q9HC23 129 aa10.18□□□□□ -0.78
COLCA1-201ENST00000355430 CDC42EP3Q9UKI2 254 aa10.18□□□□□ -0.78
COLCA1-201ENST00000355430 IGLV3-1P01715 115 aa10.17□□□□□ -0.78
COLCA1-201ENST00000355430 GOLT1AQ6ZVE7 132 aa10.17□□□□□ -0.78
COLCA1-201ENST00000355430 C16orf92Q96LL3 132 aa10.17□□□□□ -0.78
COLCA1-201ENST00000355430 MGST2Q99735 147 aa10.17□□□□□ -0.78
COLCA1-201ENST00000355430 PLA2G2EQ9NZK7 142 aa10.17□□□□□ -0.78
COLCA1-201ENST00000355430 ZFP30Q9Y2G7 519 aa10.17□□□□□ -0.78
COLCA1-201ENST00000355430 IGHV1-46P01743 117 aa10.17□□□□□ -0.78
COLCA1-201ENST00000355430 TDGF1P13385 188 aa10.17□□□□□ -0.78
COLCA1-201ENST00000355430 LYPD6Q86Y78 171 aa10.17□□□□□ -0.78
COLCA1-201ENST00000355430 LURAP1LQ8IV03 231 aa10.17□□□□□ -0.78
COLCA1-201ENST00000355430 PARD6GQ9BYG4 376 aaPredicted RBP10.17□□□□□ -0.78
COLCA1-201ENST00000355430 PEMTQ9UBM1 199 aa10.17□□□□□ -0.78
COLCA1-201ENST00000355430 A0A1W2PRX2 142 aa10.17□□□□□ -0.78
COLCA1-201ENST00000355430 ATP5IP56385 69 aaPredicted RBP10.17□□□□□ -0.78
COLCA1-201ENST00000355430 ZNF726P1Q15940 193 aa10.17□□□□□ -0.78
COLCA1-201ENST00000355430 MBNL2Q5VZF2 373 aaKnown RBP10.17□□□□□ -0.78
COLCA1-201ENST00000355430 C12orf54Q6X4T0 127 aa10.17□□□□□ -0.78
COLCA1-201ENST00000355430 ZNF664Q8N3J9 261 aa10.17□□□□□ -0.78
COLCA1-201ENST00000355430 C3orf56Q8N813 242 aa10.17□□□□□ -0.78
COLCA1-201ENST00000355430 TMEM116Q8NCL8 245 aa10.17□□□□□ -0.78
COLCA1-201ENST00000355430 OR10J6PQ8NGY7 276 aa10.17□□□□□ -0.78
COLCA1-201ENST00000355430 KLF2Q9Y5W3 355 aaPredicted RBP10.17□□□□□ -0.78
COLCA1-201ENST00000355430 INTS1Q8N201 2190 aaKnown RBP10.17□□□□□ -0.78
COLCA1-201ENST00000355430 TRAV3A0A0B4J244 114 aa10.17□□□□□ -0.78
COLCA1-201ENST00000355430 LINC00473A8K010 186 aa10.17□□□□□ -0.78
COLCA1-201ENST00000355430 STAG3L2P0CL84 134 aa10.17□□□□□ -0.78
COLCA1-201ENST00000355430 STAG3L3P0CL85 134 aa10.17□□□□□ -0.78
COLCA1-201ENST00000355430 SAA1P0DJI8 122 aaPredicted RBP10.17□□□□□ -0.78
COLCA1-201ENST00000355430 GZMBP10144 247 aa10.17□□□□□ -0.78
COLCA1-201ENST00000355430 TMEM144Q7Z5S9 345 aa10.17□□□□□ -0.78
COLCA1-201ENST00000355430 J3KRW8 73 aa10.16□□□□□ -0.78
COLCA1-201ENST00000355430 UPK2O00526 184 aa10.16□□□□□ -0.78
COLCA1-201ENST00000355430 DDB2Q92466 427 aa10.16□□□□□ -0.78
COLCA1-201ENST00000355430 COL6A6A6NMZ7 2263 aa10.16□□□□□ -0.78
COLCA1-201ENST00000355430 GNG5P63218 68 aa10.16□□□□□ -0.78
COLCA1-201ENST00000355430 RPL24P83731 157 aaKnown RBP10.16□□□□□ -0.78
COLCA1-201ENST00000355430 LEMD1Q68G75 181 aa10.16□□□□□ -0.78
COLCA1-201ENST00000355430 OSR1Q8TAX0 266 aaPredicted RBP10.16□□□□□ -0.78
COLCA1-201ENST00000355430 SLC25A33Q9BSK2 321 aa10.16□□□□□ -0.78
COLCA1-201ENST00000355430 TMEM70Q9BUB7 260 aa10.16□□□□□ -0.78
COLCA1-201ENST00000355430 FCGR2BP31994 310 aaPredicted RBP10.16□□□□□ -0.78
COLCA1-201ENST00000355430 RAB9AP51151 201 aa10.16□□□□□ -0.78
COLCA1-201ENST00000355430 LYPD6BQ8NI32 183 aa10.16□□□□□ -0.78
COLCA1-201ENST00000355430 SSBP4Q9BWG4 385 aaPredicted RBP10.16□□□□□ -0.78
COLCA1-201ENST00000355430 FOXL1Q12952 345 aa10.16□□□□□ -0.78
COLCA1-201ENST00000355430 ZCCHC24Q8N2G6 241 aaKnown RBP10.16□□□□□ -0.78
COLCA1-201ENST00000355430 ICE1Q9Y2F5 2266 aa10.16□□□□□ -0.78
COLCA1-201ENST00000355430 TCRBV4S1A1TA0A5B7 111 aa10.16□□□□□ -0.78
COLCA1-201ENST00000355430 NTF4P34130 210 aa10.16□□□□□ -0.78
COLCA1-201ENST00000355430 CA1P00915 261 aaPredicted RBP10.15□□□□□ -0.78
COLCA1-201ENST00000355430 ZNF124Q15973 351 aa10.15□□□□□ -0.78
COLCA1-201ENST00000355430 PPP1R27Q86WC6 154 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms