RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 OR10W1Q8NGF6 305 aa16.11■□□□□ 0.17
SEMA6C-201ENST00000341697 SFRP2Q96HF1 295 aa16.11■□□□□ 0.17
SEMA6C-201ENST00000341697 TUBA4BQ9H853 241 aa16.11■□□□□ 0.17
SEMA6C-201ENST00000341697 CXorf65A6NEN9 183 aa16.11■□□□□ 0.17
SEMA6C-201ENST00000341697 TMEM219Q86XT9 240 aa16.11■□□□□ 0.17
SEMA6C-201ENST00000341697 LINC01356Q8N9X3 169 aa16.11■□□□□ 0.17
SEMA6C-201ENST00000341697 GATA4P43694 442 aa16.11■□□□□ 0.17
SEMA6C-201ENST00000341697 TBL2Q9Y4P3 447 aaKnown RBP16.11■□□□□ 0.17
SEMA6C-201ENST00000341697 NTF4P34130 210 aa16.1■□□□□ 0.17
SEMA6C-201ENST00000341697 SUPT4H1P63272 117 aaKnown RBP16.1■□□□□ 0.17
SEMA6C-201ENST00000341697 C10orf55Q5SWW7 151 aa16.1■□□□□ 0.17
SEMA6C-201ENST00000341697 OR1P1Q8NH06 330 aa16.1■□□□□ 0.17
SEMA6C-201ENST00000341697 ITLN2Q8WWU7 325 aaPredicted RBP16.1■□□□□ 0.17
SEMA6C-201ENST00000341697 H3BUX3 64 aa16.1■□□□□ 0.17
SEMA6C-201ENST00000341697 LINC00527Q9UJ94 153 aa16.1■□□□□ 0.17
SEMA6C-201ENST00000341697 H0YJW9 148 aa16.1■□□□□ 0.17
SEMA6C-201ENST00000341697 CEACAM4O75871 244 aa16.1■□□□□ 0.17
SEMA6C-201ENST00000341697 IGLV1-44P01699 117 aa16.1■□□□□ 0.17
SEMA6C-201ENST00000341697 Q8TCH9 128 aa16.1■□□□□ 0.17
SEMA6C-201ENST00000341697 ZNF841Q6ZN19 808 aa16.1■□□□□ 0.17
SEMA6C-201ENST00000341697 C5orf24Q7Z6I8 188 aa16.1■□□□□ 0.17
SEMA6C-201ENST00000341697 J3QKU1 62 aa16.09■□□□□ 0.17
SEMA6C-201ENST00000341697 TMEM167AQ8TBQ9 72 aa16.09■□□□□ 0.17
SEMA6C-201ENST00000341697 IFT22Q9H7X7 185 aa16.09■□□□□ 0.17
SEMA6C-201ENST00000341697 ZNF503-AS2A6NEH8 195 aa16.09■□□□□ 0.17
SEMA6C-201ENST00000341697 PRTN3P24158 256 aa16.09■□□□□ 0.17
SEMA6C-201ENST00000341697 SLX1AQ9BQ83 275 aa16.09■□□□□ 0.17
SEMA6C-201ENST00000341697 DOCK7Q96N67 2140 aa16.09■□□□□ 0.17
SEMA6C-201ENST00000341697 DENND4CQ5VZ89 1909 aa16.09■□□□□ 0.17
SEMA6C-201ENST00000341697 BIVMQ86UB2 503 aa16.09■□□□□ 0.17
SEMA6C-201ENST00000341697 C8orf46Q8TAG6 207 aa16.09■□□□□ 0.17
SEMA6C-201ENST00000341697 Q9H3A6 140 aa16.09■□□□□ 0.17
SEMA6C-201ENST00000341697 Q6ZR03 302 aa16.08■□□□□ 0.17
SEMA6C-201ENST00000341697 WDR83OSQ9Y284 106 aa16.08■□□□□ 0.16
SEMA6C-201ENST00000341697 TRGC2P03986 189 aa16.08■□□□□ 0.16
SEMA6C-201ENST00000341697 RNF224P0DH78 156 aa16.08■□□□□ 0.16
SEMA6C-201ENST00000341697 K7EM74 188 aa16.07■□□□□ 0.16
SEMA6C-201ENST00000341697 C5orf64Q2M2E5 130 aa16.07■□□□□ 0.16
SEMA6C-201ENST00000341697 FMC1Q96HJ9 113 aa16.07■□□□□ 0.16
SEMA6C-201ENST00000341697 MRPL18Q9H0U6 180 aaKnown RBP16.07■□□□□ 0.16
SEMA6C-201ENST00000341697 CFPP27918 469 aa16.07■□□□□ 0.16
SEMA6C-201ENST00000341697 RELBQ01201 579 aa16.07■□□□□ 0.16
SEMA6C-201ENST00000341697 C2orf83Q53S99 150 aa16.07■□□□□ 0.16
SEMA6C-201ENST00000341697 SLC50A1Q9BRV3 221 aa16.07■□□□□ 0.16
SEMA6C-201ENST00000341697 ATP5G3P48201 142 aa16.07■□□□□ 0.16
SEMA6C-201ENST00000341697 AMMECR1LQ6DCA0 310 aa16.07■□□□□ 0.16
SEMA6C-201ENST00000341697 ZNF383Q8NA42 475 aa16.07■□□□□ 0.16
SEMA6C-201ENST00000341697 HS3ST6Q96QI5 342 aa16.07■□□□□ 0.16
SEMA6C-201ENST00000341697 SCO2A0A1W2PP80 73 aa16.07■□□□□ 0.16
SEMA6C-201ENST00000341697 FAM181BA6NEQ2 426 aa16.07■□□□□ 0.16
SEMA6C-201ENST00000341697 BTF3P20290 206 aaKnown RBP16.07■□□□□ 0.16
SEMA6C-201ENST00000341697 FAM71F2Q6NXP2 309 aa16.07■□□□□ 0.16
SEMA6C-201ENST00000341697 MBNL3Q9NUK0 354 aaKnown RBP16.07■□□□□ 0.16
SEMA6C-201ENST00000341697 LINC00473A8K010 186 aa16.06■□□□□ 0.16
SEMA6C-201ENST00000341697 IGKV1-5P01602 117 aa16.06■□□□□ 0.16
SEMA6C-201ENST00000341697 EFNB3Q15768 340 aa16.06■□□□□ 0.16
SEMA6C-201ENST00000341697 MAP1LC3AQ9H492 121 aa16.06■□□□□ 0.16
SEMA6C-201ENST00000341697 OTORQ9NRC9 128 aa16.06■□□□□ 0.16
SEMA6C-201ENST00000341697 PAX8Q06710 450 aa16.06■□□□□ 0.16
SEMA6C-201ENST00000341697 UBE2L6O14933 153 aa16.06■□□□□ 0.16
SEMA6C-201ENST00000341697 NMSQ5H8A3 153 aa16.06■□□□□ 0.16
SEMA6C-201ENST00000341697 FAM74A4Q5TZK3 123 aa16.06■□□□□ 0.16
SEMA6C-201ENST00000341697 SCGB1D4Q6XE38 83 aa16.06■□□□□ 0.16
SEMA6C-201ENST00000341697 TCF24Q7RTU0 167 aa16.06■□□□□ 0.16
SEMA6C-201ENST00000341697 LMO1P25800 156 aa16.06■□□□□ 0.16
SEMA6C-201ENST00000341697 NEU1Q99519 415 aa16.06■□□□□ 0.16
SEMA6C-201ENST00000341697 TGIF2-C20orf24A0A0A6YYL0 155 aa16.05■□□□□ 0.16
SEMA6C-201ENST00000341697 PSMB11A5LHX3 300 aa16.05■□□□□ 0.16
SEMA6C-201ENST00000341697 DKK1O94907 266 aa16.05■□□□□ 0.16
SEMA6C-201ENST00000341697 MPDZO75970 2070 aa16.05■□□□□ 0.16
SEMA6C-201ENST00000341697 LHFPL5Q8TAF8 219 aa16.05■□□□□ 0.16
SEMA6C-201ENST00000341697 FBLL1A6NHQ2 334 aaKnown RBP16.05■□□□□ 0.16
SEMA6C-201ENST00000341697 HERPUD1Q15011 391 aa16.05■□□□□ 0.16
SEMA6C-201ENST00000341697 PLXND1Q9Y4D7 1925 aa16.05■□□□□ 0.16
SEMA6C-201ENST00000341697 SRP19P09132 144 aaKnown RBP16.05■□□□□ 0.16
SEMA6C-201ENST00000341697 VAMP3Q15836 100 aa16.05■□□□□ 0.16
SEMA6C-201ENST00000341697 ZNF56Q15929 161 aa16.05■□□□□ 0.16
SEMA6C-201ENST00000341697 RNF138Q8WVD3 245 aa16.05■□□□□ 0.16
SEMA6C-201ENST00000341697 C11orf44Q8N8P7 122 aa16.04■□□□□ 0.16
SEMA6C-201ENST00000341697 KIAA2026Q5HYC2 2103 aa16.04■□□□□ 0.16
SEMA6C-201ENST00000341697 MSMBP08118 114 aa16.04■□□□□ 0.16
SEMA6C-201ENST00000341697 GATA3P23771 443 aa16.04■□□□□ 0.16
SEMA6C-201ENST00000341697 C15orf32Q32M92 178 aa16.04■□□□□ 0.16
SEMA6C-201ENST00000341697 RNF223E7ERA6 249 aa16.04■□□□□ 0.16
SEMA6C-201ENST00000341697 SCGB1C2P0DMR2 95 aa16.04■□□□□ 0.16
SEMA6C-201ENST00000341697 ASIPP42127 132 aa16.04■□□□□ 0.16
SEMA6C-201ENST00000341697 TAS2R60P59551 318 aa16.04■□□□□ 0.16
SEMA6C-201ENST00000341697 LEMD1Q68G75 181 aa16.04■□□□□ 0.16
SEMA6C-201ENST00000341697 ITGB1BP1O14713 200 aa16.03■□□□□ 0.16
SEMA6C-201ENST00000341697 SAA4P35542 130 aa16.03■□□□□ 0.16
SEMA6C-201ENST00000341697 TRAV3A0A0B4J244 114 aa16.03■□□□□ 0.16
SEMA6C-201ENST00000341697 IGLV3-9A0A075B6K5 115 aa16.03■□□□□ 0.16
SEMA6C-201ENST00000341697 E9PQ18 207 aa16.03■□□□□ 0.16
SEMA6C-201ENST00000341697 GGCTO75223 188 aaKnown RBP16.03■□□□□ 0.16
SEMA6C-201ENST00000341697 RSPO1Q2MKA7 263 aaPredicted RBP16.03■□□□□ 0.16
SEMA6C-201ENST00000341697 Q5PR19 223 aa16.03■□□□□ 0.16
SEMA6C-201ENST00000341697 LDLRAD2Q5SZI1 272 aa16.03■□□□□ 0.16
SEMA6C-201ENST00000341697 PRO1933Q9H354 126 aa16.03■□□□□ 0.16
SEMA6C-201ENST00000341697 TRBV9A0A0B4J1U6 114 aa16.03■□□□□ 0.16
SEMA6C-201ENST00000341697 C9JCJ5 164 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms