RNA–Protein interactions for RNA: ENST00000316673.8

HNF4A-202, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,470 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-202ENST00000316673 RAB2AP61019 212 aa12.15□□□□□ -0.46
HNF4A-202ENST00000316673 SLC35E3Q7Z769 313 aa12.15□□□□□ -0.46
HNF4A-202ENST00000316673 RBMXL1Q96E39 390 aaKnown RBP12.15□□□□□ -0.46
HNF4A-202ENST00000316673 WDR83OSQ9Y284 106 aa12.15□□□□□ -0.46
HNF4A-202ENST00000316673 CLPSL1A2RUU4 121 aa12.14□□□□□ -0.47
HNF4A-202ENST00000316673 ZNF705EA8MWA4 302 aaPredicted RBP12.14□□□□□ -0.47
HNF4A-202ENST00000316673 PRSS46E5RG02 174 aa12.14□□□□□ -0.47
HNF4A-202ENST00000316673 E7EUB6 86 aa12.14□□□□□ -0.47
HNF4A-202ENST00000316673 BTNL8Q6UX41 500 aa12.14□□□□□ -0.47
HNF4A-202ENST00000316673 TMEM144Q7Z5S9 345 aa12.14□□□□□ -0.47
HNF4A-202ENST00000316673 SGMS2Q8NHU3 365 aa12.14□□□□□ -0.47
HNF4A-202ENST00000316673 C19orf24Q9BVV8 132 aa12.14□□□□□ -0.47
HNF4A-202ENST00000316673 PFDN2Q9UHV9 154 aa12.14□□□□□ -0.47
HNF4A-202ENST00000316673 ZNF580Q9UK33 172 aa12.14□□□□□ -0.47
HNF4A-202ENST00000316673 IGHV7-81A0A0B4J1V7 117 aa12.14□□□□□ -0.47
HNF4A-202ENST00000316673 AP4M1O00189 453 aa12.14□□□□□ -0.47
HNF4A-202ENST00000316673 CRYGCP07315 174 aa12.14□□□□□ -0.47
HNF4A-202ENST00000316673 CTRB1P17538 263 aa12.14□□□□□ -0.47
HNF4A-202ENST00000316673 CTRB2Q6GPI1 263 aa12.14□□□□□ -0.47
HNF4A-202ENST00000316673 SLC16A13Q7RTY0 426 aa12.14□□□□□ -0.47
HNF4A-202ENST00000316673 TTC9CQ8N5M4 171 aa12.14□□□□□ -0.47
HNF4A-202ENST00000316673 LINC01006Q8NI28 216 aa12.14□□□□□ -0.47
HNF4A-202ENST00000316673 TMEM170AQ8WVE7 144 aa12.14□□□□□ -0.47
HNF4A-202ENST00000316673 MISP3Q96FF7 219 aa12.14□□□□□ -0.47
HNF4A-202ENST00000316673 WNT10AQ9GZT5 417 aa12.14□□□□□ -0.47
HNF4A-202ENST00000316673 PARP11Q9NR21 331 aa12.14□□□□□ -0.47
HNF4A-202ENST00000316673 NUDT19A8MXV4 375 aa12.13□□□□□ -0.47
HNF4A-202ENST00000316673 REG1AP05451 166 aa12.13□□□□□ -0.47
HNF4A-202ENST00000316673 AREGP15514 252 aa12.13□□□□□ -0.47
HNF4A-202ENST00000316673 CAMLGP49069 296 aa12.13□□□□□ -0.47
HNF4A-202ENST00000316673 AKIRIN2Q53H80 203 aa12.13□□□□□ -0.47
HNF4A-202ENST00000316673 PVRIGQ6DKI7 326 aa12.13□□□□□ -0.47
HNF4A-202ENST00000316673 TMEM182Q6ZP80 229 aaPredicted RBP12.13□□□□□ -0.47
HNF4A-202ENST00000316673 CENPVQ7Z7K6 275 aaPredicted RBP12.13□□□□□ -0.47
HNF4A-202ENST00000316673 NPCDR1Q9BY65 106 aa12.13□□□□□ -0.47
HNF4A-202ENST00000316673 A0A1B0GW64 132 aa12.12□□□□□ -0.47
HNF4A-202ENST00000316673 IGF1P05019 195 aa12.12□□□□□ -0.47
HNF4A-202ENST00000316673 FABP1P07148 127 aa12.12□□□□□ -0.47
HNF4A-202ENST00000316673 FAM74A1Q5RGS3 127 aa12.12□□□□□ -0.47
HNF4A-202ENST00000316673 TREML4Q6UXN2 200 aa12.12□□□□□ -0.47
HNF4A-202ENST00000316673 RNF114Q9Y508 228 aa12.12□□□□□ -0.47
HNF4A-202ENST00000316673 COL6A5A8TX70 2615 aa12.11□□□□□ -0.47
HNF4A-202ENST00000316673 SH2D7A6NKC9 451 aaPredicted RBP12.11□□□□□ -0.47
HNF4A-202ENST00000316673 NMBP08949 121 aa12.11□□□□□ -0.47
HNF4A-202ENST00000316673 SSBP2P81877 361 aaPredicted RBP12.11□□□□□ -0.47
HNF4A-202ENST00000316673 RUNX1Q01196 453 aa12.11□□□□□ -0.47
HNF4A-202ENST00000316673 ACOT6Q3I5F7 207 aaPredicted RBP12.11□□□□□ -0.47
HNF4A-202ENST00000316673 UNQ5815/PRO19632Q6UWF5 114 aa12.11□□□□□ -0.47
HNF4A-202ENST00000316673 LFNGQ8NES3 379 aa12.11□□□□□ -0.47
HNF4A-202ENST00000316673 FAM110DQ8TAY7 271 aaPredicted RBP12.11□□□□□ -0.47
HNF4A-202ENST00000316673 HSPB9Q9BQS6 159 aa12.11□□□□□ -0.47
HNF4A-202ENST00000316673 SH3BGRL3Q9H299 93 aa12.11□□□□□ -0.47
HNF4A-202ENST00000316673 SERTAD4Q9NUC0 356 aa12.11□□□□□ -0.47
HNF4A-202ENST00000316673 MED9Q9NWA0 146 aa12.11□□□□□ -0.47
HNF4A-202ENST00000316673 TSPAN15O95858 294 aa12.1□□□□□ -0.47
HNF4A-202ENST00000316673 HBE1P02100 147 aa12.1□□□□□ -0.47
HNF4A-202ENST00000316673 APELAP0DMC3 54 aa12.1□□□□□ -0.47
HNF4A-202ENST00000316673 MDKP21741 143 aaPredicted RBP12.1□□□□□ -0.47
HNF4A-202ENST00000316673 CRIP2P52943 208 aaPredicted RBP12.1□□□□□ -0.47
HNF4A-202ENST00000316673 SELENOTP62341 195 aa12.1□□□□□ -0.47
HNF4A-202ENST00000316673 SLC35B1P78383 322 aa12.1□□□□□ -0.47
HNF4A-202ENST00000316673 GAMTQ14353 236 aa12.1□□□□□ -0.47
HNF4A-202ENST00000316673 Q6ZS46 218 aa12.1□□□□□ -0.47
HNF4A-202ENST00000316673 FAM103A1Q9BTL3 118 aaKnown RBP12.1□□□□□ -0.47
HNF4A-202ENST00000316673 RSG1Q9BU20 258 aa12.1□□□□□ -0.47
HNF4A-202ENST00000316673 LINC00862A6NCI5 91 aa12.09□□□□□ -0.47
HNF4A-202ENST00000316673 ATP6V0E1O15342 81 aa12.09□□□□□ -0.47
HNF4A-202ENST00000316673 AWAT1Q58HT5 328 aa12.09□□□□□ -0.47
HNF4A-202ENST00000316673 TMEM41BQ5BJD5 291 aa12.09□□□□□ -0.47
HNF4A-202ENST00000316673 ACY3Q96HD9 319 aa12.09□□□□□ -0.47
HNF4A-202ENST00000316673 GAR1Q9NY12 217 aaKnown RBP12.09□□□□□ -0.47
HNF4A-202ENST00000316673 LSM4Q9Y4Z0 139 aaKnown RBP12.09□□□□□ -0.47
HNF4A-202ENST00000316673 TRAV30A0A087WSZ9 112 aa12.08□□□□□ -0.47
HNF4A-202ENST00000316673 RPL29P47914 159 aaKnown RBP12.08□□□□□ -0.47
HNF4A-202ENST00000316673 NPBWR1P48145 328 aa12.08□□□□□ -0.47
HNF4A-202ENST00000316673 PROK1P58294 105 aa12.08□□□□□ -0.47
HNF4A-202ENST00000316673 ZNF616Q08AN1 781 aa12.08□□□□□ -0.47
HNF4A-202ENST00000316673 ECSCRQ19T08 205 aa12.08□□□□□ -0.47
HNF4A-202ENST00000316673 FFAR4Q5NUL3 377 aa12.08□□□□□ -0.47
HNF4A-202ENST00000316673 Q6ZRG5 221 aa12.08□□□□□ -0.47
HNF4A-202ENST00000316673 COMMD1Q8N668 190 aa12.08□□□□□ -0.47
HNF4A-202ENST00000316673 TMEM116Q8NCL8 245 aa12.08□□□□□ -0.47
HNF4A-202ENST00000316673 FAM213BQ8TBF2 198 aa12.08□□□□□ -0.47
HNF4A-202ENST00000316673 TRAV41A0A0B4J266 112 aa12.08□□□□□ -0.48
HNF4A-202ENST00000316673 ZFP92A6NM28 416 aa12.08□□□□□ -0.48
HNF4A-202ENST00000316673 H3BUA1 57 aa12.08□□□□□ -0.48
HNF4A-202ENST00000316673 AGPAT2O15120 278 aa12.08□□□□□ -0.48
HNF4A-202ENST00000316673 MT-CO2P00403 227 aa12.08□□□□□ -0.48
HNF4A-202ENST00000316673 M6PRP20645 277 aa12.08□□□□□ -0.48
HNF4A-202ENST00000316673 NDPQ00604 133 aa12.08□□□□□ -0.48
HNF4A-202ENST00000316673 PXDC1Q5TGL8 231 aa12.08□□□□□ -0.48
HNF4A-202ENST00000316673 ACSM6Q6P461 480 aa12.08□□□□□ -0.48
HNF4A-202ENST00000316673 S100A7AQ86SG5 101 aa12.08□□□□□ -0.48
HNF4A-202ENST00000316673 KLHDC1Q8N7A1 406 aa12.08□□□□□ -0.48
HNF4A-202ENST00000316673 CXorf58Q96LI9 332 aa12.08□□□□□ -0.48
HNF4A-202ENST00000316673 FBN1P35555 2871 aaKnown RBP12.07□□□□□ -0.48
HNF4A-202ENST00000316673 IGLV11-55A0A075B6I3 123 aa12.07□□□□□ -0.48
HNF4A-202ENST00000316673 PSMB11A5LHX3 300 aa12.07□□□□□ -0.48
HNF4A-202ENST00000316673 LINC01548A6NM66 108 aa12.07□□□□□ -0.48
HNF4A-202ENST00000316673 H2AFB1P0C5Y9 115 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms