RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 FNDC4Q9H6D8 234 aaPredicted RBP17.05■□□□□ 0.32
SOX17-201ENST00000297316 SLC45A2Q9UMX9 530 aa17.05■□□□□ 0.32
SOX17-201ENST00000297316 LINC00587B1AMM8 73 aa17.05■□□□□ 0.32
SOX17-201ENST00000297316 ATP5IP56385 69 aaPredicted RBP17.05■□□□□ 0.32
SOX17-201ENST00000297316 ELOBQ15370 118 aa17.05■□□□□ 0.32
SOX17-201ENST00000297316 Q8WTZ3 238 aa17.05■□□□□ 0.32
SOX17-201ENST00000297316 SEPSECSQ9HD40 501 aaKnown RBP17.05■□□□□ 0.32
SOX17-201ENST00000297316 IGLC7A0M8Q6 106 aa17.04■□□□□ 0.32
SOX17-201ENST00000297316 FCN1O00602 326 aa17.04■□□□□ 0.32
SOX17-201ENST00000297316 SOX15O60248 233 aa17.04■□□□□ 0.32
SOX17-201ENST00000297316 IGHV3-48P01763 117 aa17.04■□□□□ 0.32
SOX17-201ENST00000297316 PSMB3P49720 205 aa17.04■□□□□ 0.32
SOX17-201ENST00000297316 GNB1P62873 340 aa17.04■□□□□ 0.32
SOX17-201ENST00000297316 SSBP2P81877 361 aaPredicted RBP17.04■□□□□ 0.32
SOX17-201ENST00000297316 TNXAQ16473 311 aa17.04■□□□□ 0.32
SOX17-201ENST00000297316 URGCP-MRPS24S4R325 110 aa17.04■□□□□ 0.32
SOX17-201ENST00000297316 CXCL1P09341 107 aa17.04■□□□□ 0.32
SOX17-201ENST00000297316 ARL14EPLP0DKL9 152 aa17.04■□□□□ 0.32
SOX17-201ENST00000297316 OR10J1P30954 320 aa17.04■□□□□ 0.32
SOX17-201ENST00000297316 KIAA0141Q14154 515 aaPredicted RBP17.04■□□□□ 0.32
SOX17-201ENST00000297316 MANBALQ9NQG1 85 aa17.04■□□□□ 0.32
SOX17-201ENST00000297316 ABCA1O95477 2261 aa17.04■□□□□ 0.32
SOX17-201ENST00000297316 NDUFS8O00217 210 aa17.03■□□□□ 0.32
SOX17-201ENST00000297316 STAG3L2P0CL84 134 aa17.03■□□□□ 0.32
SOX17-201ENST00000297316 STAG3L3P0CL85 134 aa17.03■□□□□ 0.32
SOX17-201ENST00000297316 AREGP15514 252 aa17.03■□□□□ 0.32
SOX17-201ENST00000297316 LGALS4P56470 323 aa17.03■□□□□ 0.32
SOX17-201ENST00000297316 MMD2Q8IY49 270 aa17.03■□□□□ 0.32
SOX17-201ENST00000297316 MRPL36Q9P0J6 103 aaKnown RBP17.03■□□□□ 0.32
SOX17-201ENST00000297316 UBE2G2P60604 165 aa17.03■□□□□ 0.32
SOX17-201ENST00000297316 RUSC1-AS1Q66K80 236 aa17.03■□□□□ 0.32
SOX17-201ENST00000297316 AJUBAQ96IF1 538 aa17.03■□□□□ 0.32
SOX17-201ENST00000297316 KCNIP2Q9NS61 270 aa17.03■□□□□ 0.32
SOX17-201ENST00000297316 MFAP2P55001 183 aa17.02■□□□□ 0.32
SOX17-201ENST00000297316 RAB31Q13636 194 aa17.02■□□□□ 0.32
SOX17-201ENST00000297316 HES1Q14469 280 aa17.02■□□□□ 0.32
SOX17-201ENST00000297316 MMDQ15546 238 aa17.02■□□□□ 0.32
SOX17-201ENST00000297316 PPP1R27Q86WC6 154 aa17.02■□□□□ 0.32
SOX17-201ENST00000297316 OR4F5Q8NH21 305 aa17.02■□□□□ 0.32
SOX17-201ENST00000297316 ACY3Q96HD9 319 aa17.02■□□□□ 0.32
SOX17-201ENST00000297316 OR4F4Q96R69 305 aa17.02■□□□□ 0.32
SOX17-201ENST00000297316 IGHV3OR16-10A0A075B7F0 116 aa17.02■□□□□ 0.31
SOX17-201ENST00000297316 RPL27AP46776 148 aaKnown RBP17.02■□□□□ 0.31
SOX17-201ENST00000297316 SPNS3Q6ZMD2 512 aa17.02■□□□□ 0.31
SOX17-201ENST00000297316 EAF1Q96JC9 268 aaPredicted RBP17.02■□□□□ 0.31
SOX17-201ENST00000297316 COMPP49747 757 aaPredicted RBP17.01■□□□□ 0.31
SOX17-201ENST00000297316 ZNF674Q2M3X9 581 aa17.01■□□□□ 0.31
SOX17-201ENST00000297316 TMEM249Q2WGJ8 235 aa17.01■□□□□ 0.31
SOX17-201ENST00000297316 TGIF2-C20orf24A0A0A6YYL0 155 aa17.01■□□□□ 0.31
SOX17-201ENST00000297316 NPPCP23582 126 aa17.01■□□□□ 0.31
SOX17-201ENST00000297316 ATP5G3P48201 142 aa17.01■□□□□ 0.31
SOX17-201ENST00000297316 UBE2E1P51965 193 aa17.01■□□□□ 0.31
SOX17-201ENST00000297316 PLGLAQ15195 96 aa17.01■□□□□ 0.31
SOX17-201ENST00000297316 RPUSD4Q96CM3 377 aaKnown RBP17.01■□□□□ 0.31
SOX17-201ENST00000297316 OR51M1Q9H341 326 aa17.01■□□□□ 0.31
SOX17-201ENST00000297316 POLR3KQ9Y2Y1 108 aaPredicted RBP17.01■□□□□ 0.31
SOX17-201ENST00000297316 CXorf65A6NEN9 183 aa17■□□□□ 0.31
SOX17-201ENST00000297316 ACTL6BO94805 426 aa17■□□□□ 0.31
SOX17-201ENST00000297316 SAA4P35542 130 aa17■□□□□ 0.31
SOX17-201ENST00000297316 GPX4P36969 197 aaPredicted RBP17■□□□□ 0.31
SOX17-201ENST00000297316 MIR17HGQ75NE6 70 aa17■□□□□ 0.31
SOX17-201ENST00000297316 PIP4P2Q8N4L2 257 aa17■□□□□ 0.31
SOX17-201ENST00000297316 CACNG8Q8WXS5 425 aa17■□□□□ 0.31
SOX17-201ENST00000297316 TEX22C9J3V5 150 aa16.99■□□□□ 0.31
SOX17-201ENST00000297316 MOSP00540 346 aa16.99■□□□□ 0.31
SOX17-201ENST00000297316 HOXA5P20719 270 aa16.99■□□□□ 0.31
SOX17-201ENST00000297316 MINOS1Q5TGZ0 78 aa16.99■□□□□ 0.31
SOX17-201ENST00000297316 SDF2L1Q9HCN8 221 aa16.99■□□□□ 0.31
SOX17-201ENST00000297316 MINOS1-NBL1R4GNA1 71 aa16.99■□□□□ 0.31
SOX17-201ENST00000297316 C11orf94C9JXX5 98 aa16.99■□□□□ 0.31
SOX17-201ENST00000297316 PAX8Q06710 450 aa16.99■□□□□ 0.31
SOX17-201ENST00000297316 HIST2H2BCQ6DN03 193 aa16.99■□□□□ 0.31
SOX17-201ENST00000297316 RNASEH2CQ8TDP1 164 aaKnown RBP16.99■□□□□ 0.31
SOX17-201ENST00000297316 SLC35E1Q96K37 410 aa16.99■□□□□ 0.31
SOX17-201ENST00000297316 APCP25054 2843 aa16.98■□□□□ 0.31
SOX17-201ENST00000297316 CENPVL3A0A0U1RRI6 287 aa16.98■□□□□ 0.31
SOX17-201ENST00000297316 PLA2G2AP14555 144 aa16.98■□□□□ 0.31
SOX17-201ENST00000297316 NDUFA6P56556 154 aa16.98■□□□□ 0.31
SOX17-201ENST00000297316 RHOBP62745 196 aa16.98■□□□□ 0.31
SOX17-201ENST00000297316 CLEC12BQ2HXU8 276 aa16.98■□□□□ 0.31
SOX17-201ENST00000297316 SMIM7Q9BQ49 75 aa16.98■□□□□ 0.31
SOX17-201ENST00000297316 PARLQ9H300 379 aa16.98■□□□□ 0.31
SOX17-201ENST00000297316 DOK5Q9P104 306 aa16.98■□□□□ 0.31
SOX17-201ENST00000297316 TMEM250H0YL14 139 aa16.98■□□□□ 0.31
SOX17-201ENST00000297316 NBR2O15453 112 aa16.98■□□□□ 0.31
SOX17-201ENST00000297316 CXorf1O96002 111 aa16.98■□□□□ 0.31
SOX17-201ENST00000297316 FAM120AOSQ5T036 256 aa16.98■□□□□ 0.31
SOX17-201ENST00000297316 FAM78BQ5VT40 261 aa16.98■□□□□ 0.31
SOX17-201ENST00000297316 OR51G1Q8NGK1 321 aa16.98■□□□□ 0.31
SOX17-201ENST00000297316 NPIPB3Q92617 1050 aa16.98■□□□□ 0.31
SOX17-201ENST00000297316 IGKV1D-37A0A075B6S9 117 aa16.97■□□□□ 0.31
SOX17-201ENST00000297316 SUB1P53999 127 aaKnown RBP eCLIP16.97■□□□□ 0.31
SOX17-201ENST00000297316 RNF5Q99942 180 aa16.97■□□□□ 0.31
SOX17-201ENST00000297316 HELZ2Q9BYK8 2649 aaKnown RBP16.97■□□□□ 0.31
SOX17-201ENST00000297316 ZANQ9Y493 2812 aa16.97■□□□□ 0.31
SOX17-201ENST00000297316 IFITM10A6NMD0 228 aa16.97■□□□□ 0.31
SOX17-201ENST00000297316 PAX1P15863 534 aa16.97■□□□□ 0.31
SOX17-201ENST00000297316 S100PP25815 95 aa16.97■□□□□ 0.31
SOX17-201ENST00000297316 GCHFRP30047 84 aa16.97■□□□□ 0.31
SOX17-201ENST00000297316 CDX1P47902 265 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms