RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 OPN1MW3P0DN78 364 aa8.56□□□□□ -1.04
COL4A1-205ENST00000615732 ZP3P21754 424 aa8.56□□□□□ -1.04
COL4A1-205ENST00000615732 LGALS4P56470 323 aa8.56□□□□□ -1.04
COL4A1-205ENST00000615732 RAB2AP61019 212 aa8.56□□□□□ -1.04
COL4A1-205ENST00000615732 RPL15P61313 204 aaKnown RBP8.56□□□□□ -1.04
COL4A1-205ENST00000615732 PJVKQ0ZLH3 352 aa8.56□□□□□ -1.04
COL4A1-205ENST00000615732 CCDC144NLQ6NUI1 221 aa8.56□□□□□ -1.04
COL4A1-205ENST00000615732 DPPA3Q6W0C5 159 aa8.56□□□□□ -1.04
COL4A1-205ENST00000615732 EIF4E3Q8N5X7 224 aaKnown RBP8.56□□□□□ -1.04
COL4A1-205ENST00000615732 ZNF709Q8N972 641 aa8.56□□□□□ -1.04
COL4A1-205ENST00000615732 NARS2Q96I59 477 aaKnown RBP8.56□□□□□ -1.04
COL4A1-205ENST00000615732 PSMG3Q9BT73 122 aaPredicted RBP8.56□□□□□ -1.04
COL4A1-205ENST00000615732 PLA2G2EQ9NZK7 142 aa8.56□□□□□ -1.04
COL4A1-205ENST00000615732 VPREB3Q9UKI3 123 aa8.56□□□□□ -1.04
COL4A1-205ENST00000615732 FBXO7Q9Y3I1 522 aa8.56□□□□□ -1.04
COL4A1-205ENST00000615732 DNAH3Q8TD57 4116 aa8.56□□□□□ -1.04
COL4A1-205ENST00000615732 TEX50A0A1B0GTY4 177 aa8.55□□□□□ -1.04
COL4A1-205ENST00000615732 BTBD17A6NE02 478 aa8.55□□□□□ -1.04
COL4A1-205ENST00000615732 PMS2P5A8MQ11 134 aa8.55□□□□□ -1.04
COL4A1-205ENST00000615732 ODF3BA8MYP8 253 aa8.55□□□□□ -1.04
COL4A1-205ENST00000615732 KRBOX1C9JBD0 128 aa8.55□□□□□ -1.04
COL4A1-205ENST00000615732 C17orf112F2Z3M2 114 aa8.55□□□□□ -1.04
COL4A1-205ENST00000615732 NPFFO15130 113 aa8.55□□□□□ -1.04
COL4A1-205ENST00000615732 ACTL6BO94805 426 aa8.55□□□□□ -1.04
COL4A1-205ENST00000615732 IGLV2-23P01705 113 aa8.55□□□□□ -1.04
COL4A1-205ENST00000615732 FBP1P09467 338 aa8.55□□□□□ -1.04
COL4A1-205ENST00000615732 MYOD1P15172 320 aa8.55□□□□□ -1.04
COL4A1-205ENST00000615732 PAX6P26367 422 aa8.55□□□□□ -1.04
COL4A1-205ENST00000615732 DLK1P80370 383 aa8.55□□□□□ -1.04
COL4A1-205ENST00000615732 ERHP84090 104 aaKnown RBP8.55□□□□□ -1.04
COL4A1-205ENST00000615732 MINOS1Q5TGZ0 78 aa8.55□□□□□ -1.04
COL4A1-205ENST00000615732 BTNL8Q6UX41 500 aa8.55□□□□□ -1.04
COL4A1-205ENST00000615732 COMMD1Q8N668 190 aa8.55□□□□□ -1.04
COL4A1-205ENST00000615732 TEX45Q8NA69 505 aa8.55□□□□□ -1.04
COL4A1-205ENST00000615732 LFNGQ8NES3 379 aa8.55□□□□□ -1.04
COL4A1-205ENST00000615732 RBMXL1Q96E39 390 aaKnown RBP8.55□□□□□ -1.04
COL4A1-205ENST00000615732 RSG1Q9BU20 258 aa8.55□□□□□ -1.04
COL4A1-205ENST00000615732 GGACTQ9BVM4 153 aa8.55□□□□□ -1.04
COL4A1-205ENST00000615732 TREM1Q9NP99 234 aa8.55□□□□□ -1.04
COL4A1-205ENST00000615732 TIMM9Q9Y5J7 89 aa8.55□□□□□ -1.04
COL4A1-205ENST00000615732 MINOS1-NBL1R4GNA1 71 aa8.55□□□□□ -1.04
COL4A1-205ENST00000615732 TET2Q6N021 2002 aaPredicted RBP8.54□□□□□ -1.04
COL4A1-205ENST00000615732 A0A1W2PPI3 338 aa8.54□□□□□ -1.04
COL4A1-205ENST00000615732 OOSP1A8MZH6 123 aa8.54□□□□□ -1.04
COL4A1-205ENST00000615732 LY6LH3BQJ8 138 aa8.54□□□□□ -1.04
COL4A1-205ENST00000615732 RRHO14718 337 aa8.54□□□□□ -1.04
COL4A1-205ENST00000615732 AGPAT2O15120 278 aa8.54□□□□□ -1.04
COL4A1-205ENST00000615732 CA2P00918 260 aa8.54□□□□□ -1.04
COL4A1-205ENST00000615732 HBE1P02100 147 aa8.54□□□□□ -1.04
COL4A1-205ENST00000615732 SAA4P35542 130 aa8.54□□□□□ -1.04
COL4A1-205ENST00000615732 SNCAP37840 140 aa8.54□□□□□ -1.04
COL4A1-205ENST00000615732 ELLP55199 621 aaPredicted RBP8.54□□□□□ -1.04
COL4A1-205ENST00000615732 ATP5IP56385 69 aaPredicted RBP8.54□□□□□ -1.04
COL4A1-205ENST00000615732 SERF2P84101 59 aa8.54□□□□□ -1.04
COL4A1-205ENST00000615732 PLGLAQ15195 96 aa8.54□□□□□ -1.04
COL4A1-205ENST00000615732 HCP5Q6MZN7 132 aa8.54□□□□□ -1.04
COL4A1-205ENST00000615732 MMD2Q8IY49 270 aa8.54□□□□□ -1.04
COL4A1-205ENST00000615732 C11orf44Q8N8P7 122 aa8.54□□□□□ -1.04
COL4A1-205ENST00000615732 C17orf50Q8WW18 174 aa8.54□□□□□ -1.04
COL4A1-205ENST00000615732 RNF5Q99942 180 aa8.54□□□□□ -1.04
COL4A1-205ENST00000615732 ZNF430Q9H8G1 570 aaPredicted RBP8.54□□□□□ -1.04
COL4A1-205ENST00000615732 SIGLEC9Q9Y336 463 aa8.54□□□□□ -1.04
COL4A1-205ENST00000615732 HILPDAQ9Y5L2 63 aa8.54□□□□□ -1.04
COL4A1-205ENST00000615732 RFNGQ9Y644 331 aa8.54□□□□□ -1.04
COL4A1-205ENST00000615732 MBP02144 154 aa8.53□□□□□ -1.04
COL4A1-205ENST00000615732 PRB2P02812 416 aaPredicted RBP8.53□□□□□ -1.04
COL4A1-205ENST00000615732 H2AFB1P0C5Y9 115 aa8.53□□□□□ -1.04
COL4A1-205ENST00000615732 CD1BP29016 333 aa8.53□□□□□ -1.04
COL4A1-205ENST00000615732 MAS1LP35410 378 aa8.53□□□□□ -1.04
COL4A1-205ENST00000615732 RPL27AP46776 148 aaKnown RBP8.53□□□□□ -1.04
COL4A1-205ENST00000615732 FHITP49789 147 aa8.53□□□□□ -1.04
COL4A1-205ENST00000615732 SUB1P53999 127 aaKnown RBP eCLIP8.53□□□□□ -1.04
COL4A1-205ENST00000615732 AKR1C1Q04828 323 aa8.53□□□□□ -1.04
COL4A1-205ENST00000615732 PSG5Q15238 335 aa8.53□□□□□ -1.04
COL4A1-205ENST00000615732 TNXAQ16473 311 aa8.53□□□□□ -1.04
COL4A1-205ENST00000615732 LY6EQ16553 131 aa8.53□□□□□ -1.04
COL4A1-205ENST00000615732 VWC2Q2TAL6 325 aa8.53□□□□□ -1.04
COL4A1-205ENST00000615732 FBLN7Q53RD9 439 aa8.53□□□□□ -1.04
COL4A1-205ENST00000615732 TMEM41BQ5BJD5 291 aa8.53□□□□□ -1.04
COL4A1-205ENST00000615732 LHFPL4Q7Z7J7 247 aa8.53□□□□□ -1.04
COL4A1-205ENST00000615732 CCDC28AQ8IWP9 274 aa8.53□□□□□ -1.04
COL4A1-205ENST00000615732 BPIFCQ8NFQ6 507 aa8.53□□□□□ -1.04
COL4A1-205ENST00000615732 LINC00052Q96N35 136 aa8.53□□□□□ -1.04
COL4A1-205ENST00000615732 PBDC1Q9BVG4 233 aa8.53□□□□□ -1.04
COL4A1-205ENST00000615732 KCNIP2Q9NS61 270 aa8.53□□□□□ -1.04
COL4A1-205ENST00000615732 KIAA1456Q9P272 454 aa8.53□□□□□ -1.04
COL4A1-205ENST00000615732 METTL1Q9UBP6 276 aaKnown RBP8.53□□□□□ -1.04
COL4A1-205ENST00000615732 TBL2Q9Y4P3 447 aaKnown RBP8.53□□□□□ -1.04
COL4A1-205ENST00000615732 A0A1B0GV50 99 aa8.52□□□□□ -1.05
COL4A1-205ENST00000615732 G3V4G9 280 aa8.52□□□□□ -1.05
COL4A1-205ENST00000615732 H3BUX3 64 aa8.52□□□□□ -1.05
COL4A1-205ENST00000615732 MPDU1O75352 247 aa8.52□□□□□ -1.05
COL4A1-205ENST00000615732 IGKV1D-33P01593 117 aa8.52□□□□□ -1.05
COL4A1-205ENST00000615732 IGKV1-33P01594 117 aa8.52□□□□□ -1.05
COL4A1-205ENST00000615732 GNB1P62873 340 aa8.52□□□□□ -1.05
COL4A1-205ENST00000615732 RAB31Q13636 194 aa8.52□□□□□ -1.05
COL4A1-205ENST00000615732 HES1Q14469 280 aa8.52□□□□□ -1.05
COL4A1-205ENST00000615732 PRSS8Q16651 343 aa8.52□□□□□ -1.05
COL4A1-205ENST00000615732 BEAN1Q3B7T3 259 aa8.52□□□□□ -1.05
COL4A1-205ENST00000615732 C2orf83Q53S99 150 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms