RNA–Protein interactions for RNA: ENST00000582376.1

GGA3-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-212ENST00000582376 MISP3Q96FF7 219 aa6.34□□□□□ -1.39
GGA3-212ENST00000582376 NARS2Q96I59 477 aaKnown RBP6.34□□□□□ -1.39
GGA3-212ENST00000582376 METTL26Q96S19 204 aa6.34□□□□□ -1.39
GGA3-212ENST00000582376 GPHA2Q96T91 129 aa6.34□□□□□ -1.39
GGA3-212ENST00000582376 DCSTAMPQ9H295 470 aa6.34□□□□□ -1.39
GGA3-212ENST00000582376 NDUFA4L2Q9NRX3 87 aa6.34□□□□□ -1.39
GGA3-212ENST00000582376 TMEM140Q9NV12 185 aa6.34□□□□□ -1.39
GGA3-212ENST00000582376 POMPQ9Y244 141 aa6.34□□□□□ -1.39
GGA3-212ENST00000582376 KCNK7Q9Y2U2 307 aa6.34□□□□□ -1.39
GGA3-212ENST00000582376 RNF213Q63HN8 5207 aa6.33□□□□□ -1.4
GGA3-212ENST00000582376 MT-CO2P00403 227 aa6.33□□□□□ -1.4
GGA3-212ENST00000582376 HPRT1P00492 218 aa6.33□□□□□ -1.4
GGA3-212ENST00000582376 IGHV3-48P01763 117 aa6.33□□□□□ -1.4
GGA3-212ENST00000582376 FCGR1AP12314 374 aa6.33□□□□□ -1.4
GGA3-212ENST00000582376 CRYBB3P26998 211 aa6.33□□□□□ -1.4
GGA3-212ENST00000582376 ACSM3Q53FZ2 586 aa6.33□□□□□ -1.4
GGA3-212ENST00000582376 Q6ZS49 121 aa6.33□□□□□ -1.4
GGA3-212ENST00000582376 SPAG16Q8N0X2 631 aa6.33□□□□□ -1.4
GGA3-212ENST00000582376 C1orf158Q8N1D5 194 aa6.33□□□□□ -1.4
GGA3-212ENST00000582376 LINC00528Q8N1L1 170 aa6.33□□□□□ -1.4
GGA3-212ENST00000582376 DMBX1Q8NFW5 382 aa6.33□□□□□ -1.4
GGA3-212ENST00000582376 KRTAP9-2Q9BYQ4 174 aa6.33□□□□□ -1.4
GGA3-212ENST00000582376 CLEC2DQ9UHP7 191 aa6.33□□□□□ -1.4
GGA3-212ENST00000582376 MRPS16Q9Y3D3 137 aaKnown RBP6.33□□□□□ -1.4
GGA3-212ENST00000582376 AP4S1Q9Y587 144 aa6.33□□□□□ -1.4
GGA3-212ENST00000582376 IGKV1D-8A0A087WSZ0 117 aa6.32□□□□□ -1.4
GGA3-212ENST00000582376 A0A1B0GU03 582 aa6.32□□□□□ -1.4
GGA3-212ENST00000582376 FAM90A26D6RGX4 464 aa6.32□□□□□ -1.4
GGA3-212ENST00000582376 RBFOX2O43251 390 aaKnown RBP eCLIP6.32□□□□□ -1.4
GGA3-212ENST00000582376 CD1AP06126 327 aa6.32□□□□□ -1.4
GGA3-212ENST00000582376 NPBWR1P48145 328 aa6.32□□□□□ -1.4
GGA3-212ENST00000582376 ESRGQ1W209 222 aa6.32□□□□□ -1.4
GGA3-212ENST00000582376 PHYHIPQ92561 330 aa6.32□□□□□ -1.4
GGA3-212ENST00000582376 RAB3CQ96E17 227 aa6.32□□□□□ -1.4
GGA3-212ENST00000582376 PLGRKTQ9HBL7 147 aa6.32□□□□□ -1.4
GGA3-212ENST00000582376 SEPSECSQ9HD40 501 aaKnown RBP6.32□□□□□ -1.4
GGA3-212ENST00000582376 ARGLU1Q9NWB6 273 aaPredicted RBP6.32□□□□□ -1.4
GGA3-212ENST00000582376 KRTAP9-6A0A140TA67 174 aa6.31□□□□□ -1.4
GGA3-212ENST00000582376 IRGMA1A4Y4 181 aa6.31□□□□□ -1.4
GGA3-212ENST00000582376 ERICH4A6NGS2 130 aa6.31□□□□□ -1.4
GGA3-212ENST00000582376 TNFSF12O43508 249 aa6.31□□□□□ -1.4
GGA3-212ENST00000582376 ALPLP05186 524 aa6.31□□□□□ -1.4
GGA3-212ENST00000582376 CTXN2P0C2S0 81 aa6.31□□□□□ -1.4
GGA3-212ENST00000582376 TALDO1P37837 337 aa6.31□□□□□ -1.4
GGA3-212ENST00000582376 PPP5CP53041 499 aa6.31□□□□□ -1.4
GGA3-212ENST00000582376 AP2S1P53680 142 aaPredicted RBP6.31□□□□□ -1.4
GGA3-212ENST00000582376 GYS2P54840 703 aa6.31□□□□□ -1.4
GGA3-212ENST00000582376 ST3GAL4Q11206 333 aa6.31□□□□□ -1.4
GGA3-212ENST00000582376 NFE4Q86UQ8 179 aa6.31□□□□□ -1.4
GGA3-212ENST00000582376 ZNF709Q8N972 641 aa6.31□□□□□ -1.4
GGA3-212ENST00000582376 ZNF485Q8NCK3 441 aa6.31□□□□□ -1.4
GGA3-212ENST00000582376 OR4C16Q8NGL9 310 aa6.31□□□□□ -1.4
GGA3-212ENST00000582376 APH1BQ8WW43 257 aa6.31□□□□□ -1.4
GGA3-212ENST00000582376 PINX1Q96BK5 328 aaKnown RBP6.31□□□□□ -1.4
GGA3-212ENST00000582376 GNPNAT1Q96EK6 184 aaPredicted RBP6.31□□□□□ -1.4
GGA3-212ENST00000582376 RNF125Q96EQ8 232 aa6.31□□□□□ -1.4
GGA3-212ENST00000582376 CENPNQ96H22 339 aaPredicted RBP6.31□□□□□ -1.4
GGA3-212ENST00000582376 TMEM56Q96MV1 263 aa6.31□□□□□ -1.4
GGA3-212ENST00000582376 ZNF446Q9NWS9 450 aa6.31□□□□□ -1.4
GGA3-212ENST00000582376 OR51B2Q9Y5P1 312 aa6.31□□□□□ -1.4
GGA3-212ENST00000582376 LRP1Q07954 4544 aaKnown RBP6.31□□□□□ -1.4
GGA3-212ENST00000582376 A0A075B6Q4 140 aa6.3□□□□□ -1.4
GGA3-212ENST00000582376 IGLV5-52A0A0A0MRZ9 124 aa6.3□□□□□ -1.4
GGA3-212ENST00000582376 CBY3A6NI87 242 aa6.3□□□□□ -1.4
GGA3-212ENST00000582376 SULT1C2O00338 296 aa6.3□□□□□ -1.4
GGA3-212ENST00000582376 SLC17A2O00624 439 aa6.3□□□□□ -1.4
GGA3-212ENST00000582376 DENRO43583 198 aaKnown RBP6.3□□□□□ -1.4
GGA3-212ENST00000582376 NKX2-1P43699 371 aaPredicted RBP6.3□□□□□ -1.4
GGA3-212ENST00000582376 ERVK-16P61578 105 aa6.3□□□□□ -1.4
GGA3-212ENST00000582376 INSL4Q14641 139 aa6.3□□□□□ -1.4
GGA3-212ENST00000582376 SMN1Q16637 294 aaKnown RBP6.3□□□□□ -1.4
GGA3-212ENST00000582376 GDF5OSQ5U4N7 250 aa6.3□□□□□ -1.4
GGA3-212ENST00000582376 OR4B1Q8NGF8 309 aa6.3□□□□□ -1.4
GGA3-212ENST00000582376 FCGR1BQ92637 280 aa6.3□□□□□ -1.4
GGA3-212ENST00000582376 TMEM208Q9BTX3 173 aa6.3□□□□□ -1.4
GGA3-212ENST00000582376 SLC35B3Q9H1N7 401 aa6.3□□□□□ -1.4
GGA3-212ENST00000582376 FAM30AQ9NZY2 134 aa6.3□□□□□ -1.4
GGA3-212ENST00000582376 DIMT1Q9UNQ2 313 aaKnown RBP6.3□□□□□ -1.4
GGA3-212ENST00000582376 TNFRSF18Q9Y5U5 241 aa6.3□□□□□ -1.4
GGA3-212ENST00000582376 M0QYG6 137 aa6.29□□□□□ -1.4
GGA3-212ENST00000582376 MFNGO00587 321 aa6.29□□□□□ -1.4
GGA3-212ENST00000582376 EI24O14681 340 aa6.29□□□□□ -1.4
GGA3-212ENST00000582376 TMEM50AO95807 157 aa6.29□□□□□ -1.4
GGA3-212ENST00000582376 GADD45AP24522 165 aa6.29□□□□□ -1.4
GGA3-212ENST00000582376 ASIPP42127 132 aa6.29□□□□□ -1.4
GGA3-212ENST00000582376 PSG9Q00887 426 aa6.29□□□□□ -1.4
GGA3-212ENST00000582376 CATR1Q13166 79 aa6.29□□□□□ -1.4
GGA3-212ENST00000582376 FCN2Q15485 313 aa6.29□□□□□ -1.4
GGA3-212ENST00000582376 RAB11BQ15907 218 aa6.29□□□□□ -1.4
GGA3-212ENST00000582376 HSD17B12Q53GQ0 312 aa6.29□□□□□ -1.4
GGA3-212ENST00000582376 C16orf54Q6UWD8 224 aa6.29□□□□□ -1.4
GGA3-212ENST00000582376 RXFP4Q8TDU9 374 aa6.29□□□□□ -1.4
GGA3-212ENST00000582376 GLMPQ8WWB7 406 aa6.29□□□□□ -1.4
GGA3-212ENST00000582376 TMEM230Q96A57 120 aa6.29□□□□□ -1.4
GGA3-212ENST00000582376 CLUHP3Q96NS8 147 aa6.29□□□□□ -1.4
GGA3-212ENST00000582376 SAV1Q9H4B6 383 aaPredicted RBP6.29□□□□□ -1.4
GGA3-212ENST00000582376 PLEKHA2Q9HB19 425 aa6.29□□□□□ -1.4
GGA3-212ENST00000582376 NRN1Q9NPD7 142 aa6.29□□□□□ -1.4
GGA3-212ENST00000582376 COMMD9Q9P000 198 aa6.29□□□□□ -1.4
GGA3-212ENST00000582376 NSG2Q9Y328 171 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms