RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 ATP6V0BQ99437 205 aa11.04□□□□□ -0.64
LITAF-208ENST00000571627 ENY2Q9NPA8 101 aa11.04□□□□□ -0.64
LITAF-208ENST00000571627 SIGLEC8Q9NYZ4 499 aa11.04□□□□□ -0.64
LITAF-208ENST00000571627 PTTG2Q9NZH5 202 aa11.04□□□□□ -0.64
LITAF-208ENST00000571627 SHPKQ9UHJ6 478 aa11.04□□□□□ -0.64
LITAF-208ENST00000571627 SELENOKQ9Y6D0 94 aa11.04□□□□□ -0.64
LITAF-208ENST00000571627 HUWE1Q7Z6Z7 4374 aaKnown RBP11.03□□□□□ -0.64
LITAF-208ENST00000571627 IGHV3-35A0A0C4DH35 117 aa11.03□□□□□ -0.64
LITAF-208ENST00000571627 LINC00854A0A1B0GVQ3 168 aa11.03□□□□□ -0.64
LITAF-208ENST00000571627 DUXBA0A1W2PPF3 345 aa11.03□□□□□ -0.64
LITAF-208ENST00000571627 CLEC3BP05452 202 aa11.03□□□□□ -0.64
LITAF-208ENST00000571627 FRMD6-AS1P0C7T7 363 aa11.03□□□□□ -0.64
LITAF-208ENST00000571627 SNCAP37840 140 aa11.03□□□□□ -0.64
LITAF-208ENST00000571627 LCN12Q6JVE5 192 aa11.03□□□□□ -0.64
LITAF-208ENST00000571627 Q6ZRM9 215 aa11.03□□□□□ -0.64
LITAF-208ENST00000571627 Q8N1Y9 231 aa11.03□□□□□ -0.64
LITAF-208ENST00000571627 ZNF502Q8TBZ5 544 aa11.03□□□□□ -0.64
LITAF-208ENST00000571627 CACNG8Q8WXS5 425 aa11.03□□□□□ -0.64
LITAF-208ENST00000571627 CACNG5Q9UF02 275 aa11.03□□□□□ -0.64
LITAF-208ENST00000571627 TENM3Q9P273 2699 aa11.02□□□□□ -0.64
LITAF-208ENST00000571627 ZNF320A2RRD8 509 aa11.02□□□□□ -0.65
LITAF-208ENST00000571627 C2orf70A6NJV1 201 aa11.02□□□□□ -0.65
LITAF-208ENST00000571627 LGALS9O00182 355 aa11.02□□□□□ -0.65
LITAF-208ENST00000571627 SFT2D2O95562 160 aa11.02□□□□□ -0.65
LITAF-208ENST00000571627 SULT1A3P0DMM9 295 aa11.02□□□□□ -0.65
LITAF-208ENST00000571627 SULT1A4P0DMN0 295 aa11.02□□□□□ -0.65
LITAF-208ENST00000571627 VAMP1P23763 118 aa11.02□□□□□ -0.65
LITAF-208ENST00000571627 HOXA1P49639 335 aaPredicted RBP11.02□□□□□ -0.65
LITAF-208ENST00000571627 SUB1P53999 127 aaKnown RBP eCLIP11.02□□□□□ -0.65
LITAF-208ENST00000571627 CD300EQ496F6 205 aaPredicted RBP11.02□□□□□ -0.65
LITAF-208ENST00000571627 SPINK9Q5DT21 86 aa11.02□□□□□ -0.65
LITAF-208ENST00000571627 GPHB5Q86YW7 130 aa11.02□□□□□ -0.65
LITAF-208ENST00000571627 DYNLRB2Q8TF09 96 aa11.02□□□□□ -0.65
LITAF-208ENST00000571627 TMEM213A2RRL7 107 aa11.01□□□□□ -0.65
LITAF-208ENST00000571627 OR2T8A6NH00 312 aa11.01□□□□□ -0.65
LITAF-208ENST00000571627 NHLRC4P0CG21 123 aaPredicted RBP11.01□□□□□ -0.65
LITAF-208ENST00000571627 IGHV4-30-4P0DP06 118 aa11.01□□□□□ -0.65
LITAF-208ENST00000571627 FOLR2P14207 255 aa11.01□□□□□ -0.65
LITAF-208ENST00000571627 FAM106AQ4KMX7 169 aa11.01□□□□□ -0.65
LITAF-208ENST00000571627 NMSQ5H8A3 153 aa11.01□□□□□ -0.65
LITAF-208ENST00000571627 UNQ9165/PRO28630Q6UXU0 137 aa11.01□□□□□ -0.65
LITAF-208ENST00000571627 LYZL2Q7Z4W2 148 aa11.01□□□□□ -0.65
LITAF-208ENST00000571627 SBSPONQ8IVN8 264 aa11.01□□□□□ -0.65
LITAF-208ENST00000571627 LRTM2Q8N967 370 aa11.01□□□□□ -0.65
LITAF-208ENST00000571627 GAR1Q9NY12 217 aaKnown RBP11.01□□□□□ -0.65
LITAF-208ENST00000571627 C21orf62Q9NYP8 219 aa11.01□□□□□ -0.65
LITAF-208ENST00000571627 PRR13Q9NZ81 148 aa11.01□□□□□ -0.65
LITAF-208ENST00000571627 A0A1B0GU03 582 aa11□□□□□ -0.65
LITAF-208ENST00000571627 K7EIM0 57 aa11□□□□□ -0.65
LITAF-208ENST00000571627 CORTO00230 105 aa11□□□□□ -0.65
LITAF-208ENST00000571627 PLA2G10O15496 165 aa11□□□□□ -0.65
LITAF-208ENST00000571627 LYRM1O43325 122 aa11□□□□□ -0.65
LITAF-208ENST00000571627 BTCP35070 178 aa11□□□□□ -0.65
LITAF-208ENST00000571627 PPP1R1AQ13522 171 aa11□□□□□ -0.65
LITAF-208ENST00000571627 SMCO1Q147U7 214 aa11□□□□□ -0.65
LITAF-208ENST00000571627 SPSB3Q6PJ21 355 aa11□□□□□ -0.65
LITAF-208ENST00000571627 PLET1Q6UQ28 207 aa11□□□□□ -0.65
LITAF-208ENST00000571627 SCARB1Q8WTV0 552 aa11□□□□□ -0.65
LITAF-208ENST00000571627 MISP3Q96FF7 219 aa11□□□□□ -0.65
LITAF-208ENST00000571627 BSCL2Q96G97 398 aaPredicted RBP11□□□□□ -0.65
LITAF-208ENST00000571627 TXN2Q99757 166 aa11□□□□□ -0.65
LITAF-208ENST00000571627 WDR12Q9GZL7 423 aaKnown RBP11□□□□□ -0.65
LITAF-208ENST00000571627 U3KQK5 164 aa11□□□□□ -0.65
LITAF-208ENST00000571627 CEBPZOSA8MTT3 80 aa10.99□□□□□ -0.65
LITAF-208ENST00000571627 A8MWP6 167 aa10.99□□□□□ -0.65
LITAF-208ENST00000571627 F8W735 103 aaPredicted RBP10.99□□□□□ -0.65
LITAF-208ENST00000571627 TGOLN2O43493 480 aa10.99□□□□□ -0.65
LITAF-208ENST00000571627 CBLN1P23435 193 aa10.99□□□□□ -0.65
LITAF-208ENST00000571627 FCGR2BP31994 310 aaPredicted RBP10.99□□□□□ -0.65
LITAF-208ENST00000571627 HTR2BP41595 481 aa10.99□□□□□ -0.65
LITAF-208ENST00000571627 ZNF846Q147U1 533 aa10.99□□□□□ -0.65
LITAF-208ENST00000571627 DEFB114Q30KQ6 69 aa10.99□□□□□ -0.65
LITAF-208ENST00000571627 ANKRD55Q3KP44 614 aa10.99□□□□□ -0.65
LITAF-208ENST00000571627 TM4SF20Q53R12 229 aa10.99□□□□□ -0.65
LITAF-208ENST00000571627 PVRIGQ6DKI7 326 aa10.99□□□□□ -0.65
LITAF-208ENST00000571627 UBAC2Q8NBM4 344 aa10.99□□□□□ -0.65
LITAF-208ENST00000571627 OR2K2Q8NGT1 345 aa10.99□□□□□ -0.65
LITAF-208ENST00000571627 HEYLQ9NQ87 328 aaPredicted RBP10.99□□□□□ -0.65
LITAF-208ENST00000571627 TMED3Q9Y3Q3 217 aa10.99□□□□□ -0.65
LITAF-208ENST00000571627 C9orf170A2RU37 121 aa10.98□□□□□ -0.65
LITAF-208ENST00000571627 I3L2K1 104 aa10.98□□□□□ -0.65
LITAF-208ENST00000571627 MT-CO2P00403 227 aa10.98□□□□□ -0.65
LITAF-208ENST00000571627 RNASE2P10153 161 aaKnown RBP10.98□□□□□ -0.65
LITAF-208ENST00000571627 SLC25A6P12236 298 aa10.98□□□□□ -0.65
LITAF-208ENST00000571627 MFAP4P55083 255 aa10.98□□□□□ -0.65
LITAF-208ENST00000571627 GUCA2BQ16661 112 aa10.98□□□□□ -0.65
LITAF-208ENST00000571627 Q56UQ5 140 aa10.98□□□□□ -0.65
LITAF-208ENST00000571627 GTSCR1Q86UQ5 136 aa10.98□□□□□ -0.65
LITAF-208ENST00000571627 WDR89Q96FK6 387 aaPredicted RBP10.98□□□□□ -0.65
LITAF-208ENST00000571627 CHRDL1Q9BU40 450 aa10.98□□□□□ -0.65
LITAF-208ENST00000571627 HIPK2Q9H2X6 1198 aa10.98□□□□□ -0.65
LITAF-208ENST00000571627 PALMDQ9NP74 551 aa10.98□□□□□ -0.65
LITAF-208ENST00000571627 MLXQ9UH92 298 aa10.98□□□□□ -0.65
LITAF-208ENST00000571627 FLVCR2Q9UPI3 526 aa10.98□□□□□ -0.65
LITAF-208ENST00000571627 IGHV3OR16-8A0A075B7F1 116 aa10.97□□□□□ -0.65
LITAF-208ENST00000571627 ZNF785A8K8V0 405 aa10.97□□□□□ -0.65
LITAF-208ENST00000571627 IGHV3-48P01763 117 aa10.97□□□□□ -0.65
LITAF-208ENST00000571627 OR4E1P0C645 316 aa10.97□□□□□ -0.65
LITAF-208ENST00000571627 CD81P60033 236 aa10.97□□□□□ -0.65
LITAF-208ENST00000571627 TNFRSF9Q07011 255 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms