RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 TMEM114B3SHH9 223 aa0.48□□□□□ -2.33
SCFD1-216ENST00000555550 F8W036 122 aa0.48□□□□□ -2.33
SCFD1-216ENST00000555550 H3BT86 120 aa0.48□□□□□ -2.33
SCFD1-216ENST00000555550 H7C2G1 150 aa0.48□□□□□ -2.33
SCFD1-216ENST00000555550 C19orf84I3L1E1 186 aa0.48□□□□□ -2.33
SCFD1-216ENST00000555550 HLA-DRB1P01911 266 aa0.48□□□□□ -2.33
SCFD1-216ENST00000555550 PRM2P04554 102 aa0.48□□□□□ -2.33
SCFD1-216ENST00000555550 HSD11B1P28845 292 aa0.48□□□□□ -2.33
SCFD1-216ENST00000555550 SRIP30626 198 aa0.48□□□□□ -2.33
SCFD1-216ENST00000555550 CCR2P41597 374 aa0.48□□□□□ -2.33
SCFD1-216ENST00000555550 SLCO1A2P46721 670 aa0.48□□□□□ -2.33
SCFD1-216ENST00000555550 AQP4P55087 323 aa0.48□□□□□ -2.33
SCFD1-216ENST00000555550 AP3S2P59780 193 aa0.48□□□□□ -2.33
SCFD1-216ENST00000555550 TPI1P60174 286 aa0.48□□□□□ -2.33
SCFD1-216ENST00000555550 CDC42P60953 191 aa0.48□□□□□ -2.33
SCFD1-216ENST00000555550 RPL30P62888 115 aaKnown RBP0.48□□□□□ -2.33
SCFD1-216ENST00000555550 CAV1Q03135 178 aa0.48□□□□□ -2.33
SCFD1-216ENST00000555550 RPL18Q07020 188 aaKnown RBP0.48□□□□□ -2.33
SCFD1-216ENST00000555550 EDDM3AQ14507 147 aa0.48□□□□□ -2.33
SCFD1-216ENST00000555550 KCNJ8Q15842 424 aa0.48□□□□□ -2.33
SCFD1-216ENST00000555550 BATFQ16520 125 aa0.48□□□□□ -2.33
SCFD1-216ENST00000555550 KRTAP20-1Q3LI63 56 aa0.48□□□□□ -2.33
SCFD1-216ENST00000555550 TMEM155Q4W5P6 130 aa0.48□□□□□ -2.33
SCFD1-216ENST00000555550 IBA57Q5T440 356 aaKnown RBP0.48□□□□□ -2.33
SCFD1-216ENST00000555550 Q6ZQT0 140 aa0.48□□□□□ -2.33
SCFD1-216ENST00000555550 C20orf196Q8IYI0 205 aa0.48□□□□□ -2.33
SCFD1-216ENST00000555550 OR6V1Q8N148 313 aa0.48□□□□□ -2.33
SCFD1-216ENST00000555550 Q8N2B8 174 aa0.48□□□□□ -2.33
SCFD1-216ENST00000555550 H1FXQ92522 213 aaKnown RBP0.48□□□□□ -2.33
SCFD1-216ENST00000555550 ITFG2Q969R8 447 aa0.48□□□□□ -2.33
SCFD1-216ENST00000555550 TMA16Q96EY4 203 aaKnown RBP0.48□□□□□ -2.33
SCFD1-216ENST00000555550 CCDC42Q96M95 316 aa0.48□□□□□ -2.33
SCFD1-216ENST00000555550 C11orf68Q9H3H3 251 aaKnown RBP0.48□□□□□ -2.33
SCFD1-216ENST00000555550 C14orf105Q9NVL8 296 aa0.48□□□□□ -2.33
SCFD1-216ENST00000555550 PRELID3BQ9Y3B1 194 aa0.48□□□□□ -2.33
SCFD1-216ENST00000555550 MYOFQ9NZM1 2061 aa0.48□□□□□ -2.33
SCFD1-216ENST00000555550 PCDH15Q96QU1 1955 aa0.48□□□□□ -2.33
SCFD1-216ENST00000555550 BAZ2BQ9UIF8 2168 aaKnown RBP0.47□□□□□ -2.33
SCFD1-216ENST00000555550 ARHGEF28Q8N1W1 1705 aaKnown RBP0.47□□□□□ -2.33
SCFD1-216ENST00000555550 PLXND1Q9Y4D7 1925 aa0.47□□□□□ -2.33
SCFD1-216ENST00000555550 TRBV20OR9-2A0A075B6H5 130 aa0.47□□□□□ -2.33
SCFD1-216ENST00000555550 TRBV10-2A0A0K0K1G8 114 aa0.47□□□□□ -2.33
SCFD1-216ENST00000555550 hADV38S2A0JD32 116 aa0.47□□□□□ -2.33
SCFD1-216ENST00000555550 CRPP02741 224 aa0.47□□□□□ -2.33
SCFD1-216ENST00000555550 UCHL1P09936 223 aa0.47□□□□□ -2.33
SCFD1-216ENST00000555550 GPX2P18283 190 aa0.47□□□□□ -2.33
SCFD1-216ENST00000555550 RNASE4P34096 147 aaKnown RBP0.47□□□□□ -2.33
SCFD1-216ENST00000555550 AKR1C3P42330 323 aa0.47□□□□□ -2.33
SCFD1-216ENST00000555550 OR4D2P58180 307 aa0.47□□□□□ -2.33
SCFD1-216ENST00000555550 HIST1H3AP68431 136 aa0.47□□□□□ -2.33
SCFD1-216ENST00000555550 H3F3AP84243 136 aa0.47□□□□□ -2.33
SCFD1-216ENST00000555550 FABP9Q0Z7S8 132 aa0.47□□□□□ -2.33
SCFD1-216ENST00000555550 MOGQ16653 247 aa0.47□□□□□ -2.33
SCFD1-216ENST00000555550 AKIRIN2Q53H80 203 aa0.47□□□□□ -2.33
SCFD1-216ENST00000555550 AADACL3Q5VUY0 350 aa0.47□□□□□ -2.33
SCFD1-216ENST00000555550 GLT8D1Q68CQ7 371 aa0.47□□□□□ -2.33
SCFD1-216ENST00000555550 DHRS4L2Q6PKH6 230 aa0.47□□□□□ -2.33
SCFD1-216ENST00000555550 HIST2H3AQ71DI3 136 aa0.47□□□□□ -2.33
SCFD1-216ENST00000555550 TRAPPC5Q8IUR0 188 aa0.47□□□□□ -2.33
SCFD1-216ENST00000555550 OR10X1Q8NGY0 326 aa0.47□□□□□ -2.33
SCFD1-216ENST00000555550 TOMM6Q96B49 74 aa0.47□□□□□ -2.33
SCFD1-216ENST00000555550 ODF3Q96PU9 254 aa0.47□□□□□ -2.33
SCFD1-216ENST00000555550 PARVBQ9HBI1 364 aa0.47□□□□□ -2.33
SCFD1-216ENST00000555550 FBXO5Q9UKT4 447 aa0.47□□□□□ -2.33
SCFD1-216ENST00000555550 CYSLTR1Q9Y271 337 aa0.47□□□□□ -2.33
SCFD1-216ENST00000555550 TMEM56-RWDD3S4R434 201 aa0.47□□□□□ -2.33
SCFD1-216ENST00000555550 ADGRB2O60241 1585 aa0.47□□□□□ -2.33
SCFD1-216ENST00000555550 SBF1O95248 1867 aa0.47□□□□□ -2.33
SCFD1-216ENST00000555550 FAT4Q6V0I7 4981 aa0.47□□□□□ -2.33
SCFD1-216ENST00000555550 RNF213Q63HN8 5207 aa0.47□□□□□ -2.33
SCFD1-216ENST00000555550 MEIKINA0A087WXM9 373 aa0.46□□□□□ -2.34
SCFD1-216ENST00000555550 TRAV4A0A0B4J268 109 aa0.46□□□□□ -2.34
SCFD1-216ENST00000555550 TMEM269A0A1B0GVZ9 245 aa0.46□□□□□ -2.34
SCFD1-216ENST00000555550 EXOC1LA0A1B0GW35 172 aa0.46□□□□□ -2.34
SCFD1-216ENST00000555550 UBE2L6O14933 153 aa0.46□□□□□ -2.34
SCFD1-216ENST00000555550 RPP14O95059 124 aaKnown RBP0.46□□□□□ -2.34
SCFD1-216ENST00000555550 SERPINA7P05543 415 aa0.46□□□□□ -2.34
SCFD1-216ENST00000555550 MSMBP08118 114 aa0.46□□□□□ -2.34
SCFD1-216ENST00000555550 RAB13P51153 203 aa0.46□□□□□ -2.34
SCFD1-216ENST00000555550 PSME3P61289 254 aa0.46□□□□□ -2.34
SCFD1-216ENST00000555550 CDK5R1Q15078 307 aa0.46□□□□□ -2.34
SCFD1-216ENST00000555550 TAF1AQ15573 450 aaPredicted RBP0.46□□□□□ -2.34
SCFD1-216ENST00000555550 LINC01554Q52M75 96 aa0.46□□□□□ -2.34
SCFD1-216ENST00000555550 SPOPLQ6IQ16 392 aa0.46□□□□□ -2.34
SCFD1-216ENST00000555550 ZNF826PQ6ZT77 177 aa0.46□□□□□ -2.34
SCFD1-216ENST00000555550 S100A7AQ86SG5 101 aa0.46□□□□□ -2.34
SCFD1-216ENST00000555550 LYG2Q86SG7 212 aa0.46□□□□□ -2.34
SCFD1-216ENST00000555550 DHFR2Q86XF0 187 aa0.46□□□□□ -2.34
SCFD1-216ENST00000555550 C15orf53Q8NAA6 179 aa0.46□□□□□ -2.34
SCFD1-216ENST00000555550 SLC7A6Q92536 515 aa0.46□□□□□ -2.34
SCFD1-216ENST00000555550 MRPS26Q9BYN8 205 aaKnown RBP0.46□□□□□ -2.34
SCFD1-216ENST00000555550 CST9LQ9H4G1 147 aa0.46□□□□□ -2.34
SCFD1-216ENST00000555550 LSM5Q9Y4Y9 91 aaKnown RBP0.46□□□□□ -2.34
SCFD1-216ENST00000555550 BRWD1Q9NSI6 2320 aa0.46□□□□□ -2.34
SCFD1-216ENST00000555550 ASH1LQ9NR48 2969 aaKnown RBP0.45□□□□□ -2.34
SCFD1-216ENST00000555550 MYH11P35749 1972 aa0.45□□□□□ -2.34
SCFD1-216ENST00000555550 COL6A5A8TX70 2615 aa0.45□□□□□ -2.34
SCFD1-216ENST00000555550 A0A1B0GV50 99 aa0.45□□□□□ -2.34
SCFD1-216ENST00000555550 TRAPPC13A5PLN9 417 aa0.45□□□□□ -2.34
SCFD1-216ENST00000555550 DPRXA6NFQ7 191 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms