RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 ZNF471Q9BX82 626 aaPredicted RBP8.44□□□□□ -1.06
TDP1-211ENST00000555178 WNT10AQ9GZT5 417 aa8.44□□□□□ -1.06
TDP1-211ENST00000555178 FNDC4Q9H6D8 234 aaPredicted RBP8.44□□□□□ -1.06
TDP1-211ENST00000555178 CLDN34H7C241 214 aa8.44□□□□□ -1.06
TDP1-211ENST00000555178 IFITM2Q01629 132 aa8.44□□□□□ -1.06
TDP1-211ENST00000555178 UNQ5815/PRO19632Q6UWF5 114 aa8.44□□□□□ -1.06
TDP1-211ENST00000555178 SLC35E3Q7Z769 313 aa8.44□□□□□ -1.06
TDP1-211ENST00000555178 LILRB2Q8N423 598 aa8.44□□□□□ -1.06
TDP1-211ENST00000555178 MISP3Q96FF7 219 aa8.44□□□□□ -1.06
TDP1-211ENST00000555178 SERTAD4Q9NUC0 356 aa8.44□□□□□ -1.06
TDP1-211ENST00000555178 MRPL36Q9P0J6 103 aaKnown RBP8.44□□□□□ -1.06
TDP1-211ENST00000555178 F11RQ9Y624 299 aaKnown RBP8.44□□□□□ -1.06
TDP1-211ENST00000555178 S4R3C0 116 aa8.44□□□□□ -1.06
TDP1-211ENST00000555178 UBE2L5PA0A1B0GUS4 154 aa8.43□□□□□ -1.06
TDP1-211ENST00000555178 M0QZK8 103 aa8.43□□□□□ -1.06
TDP1-211ENST00000555178 TCF21O43680 179 aa8.43□□□□□ -1.06
TDP1-211ENST00000555178 C19orf54Q5BKX5 351 aa8.43□□□□□ -1.06
TDP1-211ENST00000555178 ARSJQ5FYB0 599 aaPredicted RBP8.43□□□□□ -1.06
TDP1-211ENST00000555178 ZNF329Q86UD4 541 aa8.43□□□□□ -1.06
TDP1-211ENST00000555178 OR10P1Q8NGE3 313 aa8.43□□□□□ -1.06
TDP1-211ENST00000555178 OR1S2Q8NGQ3 325 aa8.43□□□□□ -1.06
TDP1-211ENST00000555178 TRIM77I1YAP6 450 aa8.42□□□□□ -1.06
TDP1-211ENST00000555178 DEFA4P12838 97 aa8.42□□□□□ -1.06
TDP1-211ENST00000555178 RAB11AP62491 216 aa8.42□□□□□ -1.06
TDP1-211ENST00000555178 RUNX1Q01196 453 aa8.42□□□□□ -1.06
TDP1-211ENST00000555178 SLC25A24Q6NUK1 477 aa8.42□□□□□ -1.06
TDP1-211ENST00000555178 STPG2Q8N412 459 aa8.42□□□□□ -1.06
TDP1-211ENST00000555178 ZNF114Q8NC26 417 aa8.42□□□□□ -1.06
TDP1-211ENST00000555178 SMCO3A2RU48 225 aa8.42□□□□□ -1.06
TDP1-211ENST00000555178 CRYGCP07315 174 aa8.42□□□□□ -1.06
TDP1-211ENST00000555178 RPP30P78346 268 aaKnown RBP8.42□□□□□ -1.06
TDP1-211ENST00000555178 TTC9CQ8N5M4 171 aa8.42□□□□□ -1.06
TDP1-211ENST00000555178 OR1P1Q8NH06 330 aa8.42□□□□□ -1.06
TDP1-211ENST00000555178 OR2T6Q8NHC8 308 aa8.42□□□□□ -1.06
TDP1-211ENST00000555178 FANCD2OSQ96PS1 177 aa8.42□□□□□ -1.06
TDP1-211ENST00000555178 ATP5SQ99766 215 aa8.42□□□□□ -1.06
TDP1-211ENST00000555178 SH3BGRL3Q9H299 93 aa8.42□□□□□ -1.06
TDP1-211ENST00000555178 TRAV41A0A0B4J266 112 aa8.41□□□□□ -1.06
TDP1-211ENST00000555178 NPIPB5A8MRT5 1133 aa8.41□□□□□ -1.06
TDP1-211ENST00000555178 OPRK1P41145 380 aa8.41□□□□□ -1.06
TDP1-211ENST00000555178 HBG1P69891 147 aa8.41□□□□□ -1.06
TDP1-211ENST00000555178 HBG2P69892 147 aa8.41□□□□□ -1.06
TDP1-211ENST00000555178 LURAP1LQ8IV03 231 aa8.41□□□□□ -1.06
TDP1-211ENST00000555178 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.41□□□□□ -1.06
TDP1-211ENST00000555178 HSD17B11Q8NBQ5 300 aa8.41□□□□□ -1.06
TDP1-211ENST00000555178 ST8SIA2Q92186 375 aa8.41□□□□□ -1.06
TDP1-211ENST00000555178 MS4A10Q96PG2 267 aa8.41□□□□□ -1.06
TDP1-211ENST00000555178 SRSF8Q9BRL6 282 aaKnown RBP8.41□□□□□ -1.06
TDP1-211ENST00000555178 IGF1P05019 195 aa8.41□□□□□ -1.06
TDP1-211ENST00000555178 PVRIGQ6DKI7 326 aa8.41□□□□□ -1.06
TDP1-211ENST00000555178 ALKAL2Q6UX46 152 aa8.41□□□□□ -1.06
TDP1-211ENST00000555178 HSD17B13Q7Z5P4 300 aaPredicted RBP8.41□□□□□ -1.06
TDP1-211ENST00000555178 SLC51BQ86UW2 128 aa8.41□□□□□ -1.06
TDP1-211ENST00000555178 Q8N2B8 174 aa8.41□□□□□ -1.06
TDP1-211ENST00000555178 PRSS22Q9GZN4 317 aa8.41□□□□□ -1.06
TDP1-211ENST00000555178 NPFFR1Q9GZQ6 430 aa8.41□□□□□ -1.06
TDP1-211ENST00000555178 KLK15Q9H2R5 256 aa8.41□□□□□ -1.06
TDP1-211ENST00000555178 STAB1Q9NY15 2570 aa8.4□□□□□ -1.06
TDP1-211ENST00000555178 IGLV11-55A0A075B6I3 123 aa8.4□□□□□ -1.06
TDP1-211ENST00000555178 IGKV1OR2-108A0A075B7D4 117 aa8.4□□□□□ -1.06
TDP1-211ENST00000555178 OR2J3O76001 311 aa8.4□□□□□ -1.06
TDP1-211ENST00000555178 LY86O95711 162 aa8.4□□□□□ -1.06
TDP1-211ENST00000555178 MT-CO2P00403 227 aa8.4□□□□□ -1.06
TDP1-211ENST00000555178 IGHV3-23P01764 117 aa8.4□□□□□ -1.06
TDP1-211ENST00000555178 MDKP21741 143 aaPredicted RBP8.4□□□□□ -1.06
TDP1-211ENST00000555178 PPIFP30405 207 aaKnown RBP8.4□□□□□ -1.06
TDP1-211ENST00000555178 SUB1P53999 127 aaKnown RBP eCLIP8.4□□□□□ -1.06
TDP1-211ENST00000555178 CFHR3Q02985 330 aa8.4□□□□□ -1.06
TDP1-211ENST00000555178 CD69Q07108 199 aa8.4□□□□□ -1.06
TDP1-211ENST00000555178 SCGB2A2Q13296 93 aa8.4□□□□□ -1.06
TDP1-211ENST00000555178 GAMTQ14353 236 aa8.4□□□□□ -1.06
TDP1-211ENST00000555178 AKIRIN2Q53H80 203 aa8.4□□□□□ -1.06
TDP1-211ENST00000555178 SLC16A13Q7RTY0 426 aa8.4□□□□□ -1.06
TDP1-211ENST00000555178 MRPL41Q8IXM3 137 aaKnown RBP8.4□□□□□ -1.06
TDP1-211ENST00000555178 LINC01006Q8NI28 216 aa8.4□□□□□ -1.06
TDP1-211ENST00000555178 FAM110DQ8TAY7 271 aaPredicted RBP8.4□□□□□ -1.06
TDP1-211ENST00000555178 RSG1Q9BU20 258 aa8.4□□□□□ -1.06
TDP1-211ENST00000555178 ZNF355PQ9NSJ1 428 aa8.4□□□□□ -1.06
TDP1-211ENST00000555178 UQCC1Q9NVA1 299 aa8.4□□□□□ -1.06
TDP1-211ENST00000555178 VWFP04275 2813 aa8.4□□□□□ -1.06
TDP1-211ENST00000555178 COL6A5A8TX70 2615 aa8.4□□□□□ -1.07
TDP1-211ENST00000555178 MFSD2BA6NFX1 497 aa8.39□□□□□ -1.07
TDP1-211ENST00000555178 I3L2K1 104 aa8.39□□□□□ -1.07
TDP1-211ENST00000555178 K7EIM0 57 aa8.39□□□□□ -1.07
TDP1-211ENST00000555178 TAAR5O14804 337 aa8.39□□□□□ -1.07
TDP1-211ENST00000555178 TSPAN9O75954 239 aa8.39□□□□□ -1.07
TDP1-211ENST00000555178 CRIP2P52943 208 aaPredicted RBP8.39□□□□□ -1.07
TDP1-211ENST00000555178 KRTAP10-3P60369 221 aa8.39□□□□□ -1.07
TDP1-211ENST00000555178 VWC2Q2TAL6 325 aa8.39□□□□□ -1.07
TDP1-211ENST00000555178 FAM74A1Q5RGS3 127 aa8.39□□□□□ -1.07
TDP1-211ENST00000555178 TREML4Q6UXN2 200 aa8.39□□□□□ -1.07
TDP1-211ENST00000555178 ACY3Q96HD9 319 aa8.39□□□□□ -1.07
TDP1-211ENST00000555178 TMEM147Q9BVK8 224 aa8.39□□□□□ -1.07
TDP1-211ENST00000555178 AP4M1O00189 453 aa8.39□□□□□ -1.07
TDP1-211ENST00000555178 NDUFB8O95169 186 aa8.39□□□□□ -1.07
TDP1-211ENST00000555178 AKR1C1Q04828 323 aa8.39□□□□□ -1.07
TDP1-211ENST00000555178 UBAC2Q8NBM4 344 aa8.39□□□□□ -1.07
TDP1-211ENST00000555178 STOML3Q8TAV4 291 aa8.39□□□□□ -1.07
TDP1-211ENST00000555178 RNASEH2CQ8TDP1 164 aaKnown RBP8.39□□□□□ -1.07
TDP1-211ENST00000555178 PCNPQ8WW12 178 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms