RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 A0A1W2PRF3 423 aa6.09□□□□□ -1.43
CDC42-205ENST00000498236 A0A1W2PRM7 423 aa6.09□□□□□ -1.43
CDC42-205ENST00000498236 E7EUB6 86 aa6.09□□□□□ -1.43
CDC42-205ENST00000498236 SOX15O60248 233 aa6.09□□□□□ -1.43
CDC42-205ENST00000498236 MPDU1O75352 247 aa6.09□□□□□ -1.43
CDC42-205ENST00000498236 CA2P00918 260 aa6.09□□□□□ -1.43
CDC42-205ENST00000498236 MYOD1P15172 320 aa6.09□□□□□ -1.43
CDC42-205ENST00000498236 CNTFRP26992 372 aa6.09□□□□□ -1.43
CDC42-205ENST00000498236 BLOC1S1P78537 153 aa6.09□□□□□ -1.43
CDC42-205ENST00000498236 SERF2P84101 59 aa6.09□□□□□ -1.43
CDC42-205ENST00000498236 PJVKQ0ZLH3 352 aa6.09□□□□□ -1.43
CDC42-205ENST00000498236 MMDQ15546 238 aa6.09□□□□□ -1.43
CDC42-205ENST00000498236 AANATQ16613 207 aa6.09□□□□□ -1.43
CDC42-205ENST00000498236 C5orf64Q2M2E5 130 aa6.09□□□□□ -1.43
CDC42-205ENST00000498236 OR8G2PQ6IF36 304 aa6.09□□□□□ -1.43
CDC42-205ENST00000498236 DPPA3Q6W0C5 159 aa6.09□□□□□ -1.43
CDC42-205ENST00000498236 SLC7A5P1Q8MH63 180 aa6.09□□□□□ -1.43
CDC42-205ENST00000498236 HSD17B11Q8NBQ5 300 aa6.09□□□□□ -1.43
CDC42-205ENST00000498236 OR2G3Q8NGZ4 309 aa6.09□□□□□ -1.43
CDC42-205ENST00000498236 LYPD6BQ8NI32 183 aa6.09□□□□□ -1.43
CDC42-205ENST00000498236 SCGB1C1Q8TD33 95 aa6.09□□□□□ -1.43
CDC42-205ENST00000498236 C17orf50Q8WW18 174 aa6.09□□□□□ -1.43
CDC42-205ENST00000498236 FBXL15Q9H469 300 aa6.09□□□□□ -1.43
CDC42-205ENST00000498236 FAM30AQ9NZY2 134 aa6.09□□□□□ -1.43
CDC42-205ENST00000498236 KIAA1456Q9P272 454 aa6.09□□□□□ -1.43
CDC42-205ENST00000498236 APCP25054 2843 aa6.09□□□□□ -1.43
CDC42-205ENST00000498236 NBPF19A0A087WUL8 3843 aa6.09□□□□□ -1.44
CDC42-205ENST00000498236 DOPEY2Q9Y3R5 2298 aa6.09□□□□□ -1.44
CDC42-205ENST00000498236 TET2Q6N021 2002 aaPredicted RBP6.08□□□□□ -1.44
CDC42-205ENST00000498236 IGLC7A0M8Q6 106 aa6.08□□□□□ -1.44
CDC42-205ENST00000498236 TSPAN9O75954 239 aa6.08□□□□□ -1.44
CDC42-205ENST00000498236 ACTL6BO94805 426 aa6.08□□□□□ -1.44
CDC42-205ENST00000498236 IFNA4P05014 189 aa6.08□□□□□ -1.44
CDC42-205ENST00000498236 IGHV4-31P0DP07 118 aa6.08□□□□□ -1.44
CDC42-205ENST00000498236 RNASE2P10153 161 aaKnown RBP6.08□□□□□ -1.44
CDC42-205ENST00000498236 GPX4P36969 197 aaPredicted RBP6.08□□□□□ -1.44
CDC42-205ENST00000498236 SNCAP37840 140 aa6.08□□□□□ -1.44
CDC42-205ENST00000498236 RPL27AP46776 148 aaKnown RBP6.08□□□□□ -1.44
CDC42-205ENST00000498236 SUB1P53999 127 aaKnown RBP eCLIP6.08□□□□□ -1.44
CDC42-205ENST00000498236 SSBP2P81877 361 aaPredicted RBP6.08□□□□□ -1.44
CDC42-205ENST00000498236 WT1-ASQ06250 92 aa6.08□□□□□ -1.44
CDC42-205ENST00000498236 TNXAQ16473 311 aa6.08□□□□□ -1.44
CDC42-205ENST00000498236 TMEM249Q2WGJ8 235 aa6.08□□□□□ -1.44
CDC42-205ENST00000498236 ZNF562Q6V9R5 426 aa6.08□□□□□ -1.44
CDC42-205ENST00000498236 EIF4E3Q8N5X7 224 aaKnown RBP6.08□□□□□ -1.44
CDC42-205ENST00000498236 OR10W1Q8NGF6 305 aa6.08□□□□□ -1.44
CDC42-205ENST00000498236 RNASEH2CQ8TDP1 164 aaKnown RBP6.08□□□□□ -1.44
CDC42-205ENST00000498236 CACNG8Q8WXS5 425 aa6.08□□□□□ -1.44
CDC42-205ENST00000498236 TAF15Q92804 592 aaKnown RBP eCLIP6.08□□□□□ -1.44
CDC42-205ENST00000498236 HINT2Q9BX68 163 aa6.08□□□□□ -1.44
CDC42-205ENST00000498236 SH3BGRL3Q9H299 93 aa6.08□□□□□ -1.44
CDC42-205ENST00000498236 PARP11Q9NR21 331 aa6.08□□□□□ -1.44
CDC42-205ENST00000498236 C1RLQ9NZP8 487 aa6.08□□□□□ -1.44
CDC42-205ENST00000498236 WDR83OSQ9Y284 106 aa6.08□□□□□ -1.44
CDC42-205ENST00000498236 TNCP24821 2201 aa6.08□□□□□ -1.44
CDC42-205ENST00000498236 MED13LQ71F56 2210 aa6.08□□□□□ -1.44
CDC42-205ENST00000498236 POLQO75417 2590 aa6.08□□□□□ -1.44
CDC42-205ENST00000498236 ABCA12Q86UK0 2595 aa6.08□□□□□ -1.44
CDC42-205ENST00000498236 WNK2Q9Y3S1 2297 aa6.08□□□□□ -1.44
CDC42-205ENST00000498236 TRAV40A0A0B4J280 105 aa6.07□□□□□ -1.44
CDC42-205ENST00000498236 UBE2L5PA0A1B0GUS4 154 aa6.07□□□□□ -1.44
CDC42-205ENST00000498236 MFSD2BA6NFX1 497 aa6.07□□□□□ -1.44
CDC42-205ENST00000498236 PRSS29PA6NIE9 313 aa6.07□□□□□ -1.44
CDC42-205ENST00000498236 ZNF705EA8MWA4 302 aaPredicted RBP6.07□□□□□ -1.44
CDC42-205ENST00000498236 TEX22C9J3V5 150 aa6.07□□□□□ -1.44
CDC42-205ENST00000498236 FCN1O00602 326 aa6.07□□□□□ -1.44
CDC42-205ENST00000498236 HLA-DRB1P01911 266 aa6.07□□□□□ -1.44
CDC42-205ENST00000498236 OPN1MWP04001 364 aa6.07□□□□□ -1.44
CDC42-205ENST00000498236 OPN1MW2P0DN77 364 aa6.07□□□□□ -1.44
CDC42-205ENST00000498236 OPN1MW3P0DN78 364 aa6.07□□□□□ -1.44
CDC42-205ENST00000498236 OR13C7P0DN81 318 aa6.07□□□□□ -1.44
CDC42-205ENST00000498236 IGHV4-38-2P0DP08 117 aa6.07□□□□□ -1.44
CDC42-205ENST00000498236 TMEM11P17152 192 aa6.07□□□□□ -1.44
CDC42-205ENST00000498236 S100A1P23297 94 aa6.07□□□□□ -1.44
CDC42-205ENST00000498236 RUNX1Q01196 453 aa6.07□□□□□ -1.44
CDC42-205ENST00000498236 HES1Q14469 280 aa6.07□□□□□ -1.44
CDC42-205ENST00000498236 PLGLAQ15195 96 aa6.07□□□□□ -1.44
CDC42-205ENST00000498236 KLF17Q5JT82 389 aaPredicted RBP6.07□□□□□ -1.44
CDC42-205ENST00000498236 C10orf55Q5SWW7 151 aa6.07□□□□□ -1.44
CDC42-205ENST00000498236 SLC25A24Q6NUK1 477 aa6.07□□□□□ -1.44
CDC42-205ENST00000498236 OR1P1Q8NH06 330 aa6.07□□□□□ -1.44
CDC42-205ENST00000498236 PCNPQ8WW12 178 aaKnown RBP6.07□□□□□ -1.44
CDC42-205ENST00000498236 SRSF12Q8WXF0 261 aaKnown RBP6.07□□□□□ -1.44
CDC42-205ENST00000498236 CXorf58Q96LI9 332 aa6.07□□□□□ -1.44
CDC42-205ENST00000498236 Q96MF0 132 aa6.07□□□□□ -1.44
CDC42-205ENST00000498236 FOXC2Q99958 501 aa6.07□□□□□ -1.44
CDC42-205ENST00000498236 NPVFQ9HCQ7 196 aa6.07□□□□□ -1.44
CDC42-205ENST00000498236 LSM4Q9Y4Z0 139 aaKnown RBP6.07□□□□□ -1.44
CDC42-205ENST00000498236 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.07□□□□□ -1.443e-7■■■□□ 16.3
CDC42-205ENST00000498236 CSMD2Q7Z408 3487 aa6.06□□□□□ -1.44
CDC42-205ENST00000498236 RAB19A4D1S5 217 aa6.06□□□□□ -1.44
CDC42-205ENST00000498236 C17orf112F2Z3M2 114 aa6.06□□□□□ -1.44
CDC42-205ENST00000498236 CORTO00230 105 aa6.06□□□□□ -1.44
CDC42-205ENST00000498236 TGFAP01135 160 aa6.06□□□□□ -1.44
CDC42-205ENST00000498236 FSHBP01225 129 aa6.06□□□□□ -1.44
CDC42-205ENST00000498236 MBP02144 154 aa6.06□□□□□ -1.44
CDC42-205ENST00000498236 FBP1P09467 338 aa6.06□□□□□ -1.44
CDC42-205ENST00000498236 FGF7P21781 194 aa6.06□□□□□ -1.44
CDC42-205ENST00000498236 CD24P25063 80 aa6.06□□□□□ -1.44
CDC42-205ENST00000498236 PAX6P26367 422 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms