RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 PJVKQ0ZLH3 352 aa10.15□□□□□ -0.78
NELFE-209ENST00000488426 MMDQ15546 238 aa10.15□□□□□ -0.78
NELFE-209ENST00000488426 CENPVQ7Z7K6 275 aaPredicted RBP10.15□□□□□ -0.78
NELFE-209ENST00000488426 AJUBAQ96IF1 538 aa10.15□□□□□ -0.78
NELFE-209ENST00000488426 KIAA1456Q9P272 454 aa10.15□□□□□ -0.78
NELFE-209ENST00000488426 IGHV1-69DA0A0B4J2H0 117 aa10.15□□□□□ -0.79
NELFE-209ENST00000488426 IGHV1-69P01742 117 aa10.15□□□□□ -0.79
NELFE-209ENST00000488426 PRH1P02810 166 aa10.15□□□□□ -0.79
NELFE-209ENST00000488426 SNRNP70P08621 437 aaKnown RBP10.15□□□□□ -0.79
NELFE-209ENST00000488426 RNASE2P10153 161 aaKnown RBP10.15□□□□□ -0.79
NELFE-209ENST00000488426 MDKP21741 143 aaPredicted RBP10.15□□□□□ -0.79
NELFE-209ENST00000488426 BRS3P32247 399 aa10.15□□□□□ -0.79
NELFE-209ENST00000488426 RPL35P42766 123 aaKnown RBP10.15□□□□□ -0.79
NELFE-209ENST00000488426 RPL27AP46776 148 aaKnown RBP10.15□□□□□ -0.79
NELFE-209ENST00000488426 COMPP49747 757 aaPredicted RBP10.15□□□□□ -0.79
NELFE-209ENST00000488426 SERF2P84101 59 aa10.15□□□□□ -0.79
NELFE-209ENST00000488426 C10orf55Q5SWW7 151 aa10.15□□□□□ -0.79
NELFE-209ENST00000488426 DPPA3Q6W0C5 159 aa10.15□□□□□ -0.79
NELFE-209ENST00000488426 Q6ZRG5 221 aa10.15□□□□□ -0.79
NELFE-209ENST00000488426 OR10W1Q8NGF6 305 aa10.15□□□□□ -0.79
NELFE-209ENST00000488426 FBXL15Q9H469 300 aa10.15□□□□□ -0.79
NELFE-209ENST00000488426 TMEM160Q9NX00 188 aa10.15□□□□□ -0.79
NELFE-209ENST00000488426 CDC42EP3Q9UKI2 254 aa10.15□□□□□ -0.79
NELFE-209ENST00000488426 E7EUB6 86 aa10.14□□□□□ -0.79
NELFE-209ENST00000488426 MPDU1O75352 247 aa10.14□□□□□ -0.79
NELFE-209ENST00000488426 FGF7P21781 194 aa10.14□□□□□ -0.79
NELFE-209ENST00000488426 CAMLGP49069 296 aa10.14□□□□□ -0.79
NELFE-209ENST00000488426 SUB1P53999 127 aaKnown RBP eCLIP10.14□□□□□ -0.79
NELFE-209ENST00000488426 HES1Q14469 280 aa10.14□□□□□ -0.79
NELFE-209ENST00000488426 PLGLAQ15195 96 aa10.14□□□□□ -0.79
NELFE-209ENST00000488426 TNXAQ16473 311 aa10.14□□□□□ -0.79
NELFE-209ENST00000488426 AKR1C8PQ5T2L2 129 aa10.14□□□□□ -0.79
NELFE-209ENST00000488426 Q8N6K4 173 aa10.14□□□□□ -0.79
NELFE-209ENST00000488426 LINC01356Q8N9X3 169 aa10.14□□□□□ -0.79
NELFE-209ENST00000488426 LYPD6BQ8NI32 183 aa10.14□□□□□ -0.79
NELFE-209ENST00000488426 RBM14Q96PK6 669 aaKnown RBP10.14□□□□□ -0.79
NELFE-209ENST00000488426 SRSF8Q9BRL6 282 aaKnown RBP10.14□□□□□ -0.79
NELFE-209ENST00000488426 RSG1Q9BU20 258 aa10.14□□□□□ -0.79
NELFE-209ENST00000488426 WDR83OSQ9Y284 106 aa10.14□□□□□ -0.79
NELFE-209ENST00000488426 FAM106CPP0CH98 169 aa10.13□□□□□ -0.79
NELFE-209ENST00000488426 WT1-ASQ06250 92 aa10.13□□□□□ -0.79
NELFE-209ENST00000488426 BTNL8Q6UX41 500 aa10.13□□□□□ -0.79
NELFE-209ENST00000488426 IL34Q6ZMJ4 242 aa10.13□□□□□ -0.79
NELFE-209ENST00000488426 PIP4P2Q8N4L2 257 aa10.13□□□□□ -0.79
NELFE-209ENST00000488426 A0A1B0GW64 132 aa10.13□□□□□ -0.79
NELFE-209ENST00000488426 RAB19A4D1S5 217 aa10.13□□□□□ -0.79
NELFE-209ENST00000488426 C17orf112F2Z3M2 114 aa10.13□□□□□ -0.79
NELFE-209ENST00000488426 SOX15O60248 233 aa10.13□□□□□ -0.79
NELFE-209ENST00000488426 HNF4GQ14541 408 aa10.13□□□□□ -0.79
NELFE-209ENST00000488426 ZNF709Q8N972 641 aa10.13□□□□□ -0.79
NELFE-209ENST00000488426 ZNF114Q8NC26 417 aa10.13□□□□□ -0.79
NELFE-209ENST00000488426 FAM213BQ8TBF2 198 aa10.13□□□□□ -0.79
NELFE-209ENST00000488426 HIF1ANQ9NWT6 349 aa10.13□□□□□ -0.79
NELFE-209ENST00000488426 FBXO7Q9Y3I1 522 aa10.13□□□□□ -0.79
NELFE-209ENST00000488426 RFNGQ9Y644 331 aa10.13□□□□□ -0.79
NELFE-209ENST00000488426 TRAV40A0A0B4J280 105 aa10.12□□□□□ -0.79
NELFE-209ENST00000488426 IGLC7A0M8Q6 106 aa10.12□□□□□ -0.79
NELFE-209ENST00000488426 FABP1P07148 127 aa10.12□□□□□ -0.79
NELFE-209ENST00000488426 OR13C7P0DN81 318 aa10.12□□□□□ -0.79
NELFE-209ENST00000488426 TMEM11P17152 192 aa10.12□□□□□ -0.79
NELFE-209ENST00000488426 CD24P25063 80 aa10.12□□□□□ -0.79
NELFE-209ENST00000488426 PAX6P26367 422 aa10.12□□□□□ -0.79
NELFE-209ENST00000488426 ZNF616Q08AN1 781 aa10.12□□□□□ -0.79
NELFE-209ENST00000488426 ZNF124Q15973 351 aa10.12□□□□□ -0.79
NELFE-209ENST00000488426 C5orf64Q2M2E5 130 aa10.12□□□□□ -0.79
NELFE-209ENST00000488426 RNASEH2CQ8TDP1 164 aaKnown RBP10.12□□□□□ -0.79
NELFE-209ENST00000488426 SRSF12Q8WXF0 261 aaKnown RBP10.12□□□□□ -0.79
NELFE-209ENST00000488426 NPCDR1Q9BY65 106 aa10.12□□□□□ -0.79
NELFE-209ENST00000488426 HRH4Q9H3N8 390 aa10.12□□□□□ -0.79
NELFE-209ENST00000488426 C7orf69Q9H7B7 122 aa10.12□□□□□ -0.79
NELFE-209ENST00000488426 NPVFQ9HCQ7 196 aa10.12□□□□□ -0.79
NELFE-209ENST00000488426 SMCO3A2RU48 225 aa10.11□□□□□ -0.79
NELFE-209ENST00000488426 TEX46H3BTG2 121 aa10.11□□□□□ -0.79
NELFE-209ENST00000488426 J3QLI3 93 aa10.11□□□□□ -0.79
NELFE-209ENST00000488426 AVPP01185 164 aa10.11□□□□□ -0.79
NELFE-209ENST00000488426 AKR1D1P51857 326 aa10.11□□□□□ -0.79
NELFE-209ENST00000488426 GNB1P62873 340 aa10.11□□□□□ -0.79
NELFE-209ENST00000488426 SSBP2P81877 361 aaPredicted RBP10.11□□□□□ -0.79
NELFE-209ENST00000488426 RELQ04864 619 aaPredicted RBP10.11□□□□□ -0.79
NELFE-209ENST00000488426 ARSJQ5FYB0 599 aaPredicted RBP10.11□□□□□ -0.79
NELFE-209ENST00000488426 UQCC3Q6UW78 93 aa10.11□□□□□ -0.79
NELFE-209ENST00000488426 TREML4Q6UXN2 200 aa10.11□□□□□ -0.79
NELFE-209ENST00000488426 COMMD1Q8N668 190 aa10.11□□□□□ -0.79
NELFE-209ENST00000488426 CACNG8Q8WXS5 425 aa10.11□□□□□ -0.79
NELFE-209ENST00000488426 BIN3Q9NQY0 253 aa10.11□□□□□ -0.79
NELFE-209ENST00000488426 GSN-AS1Q9NRJ2 163 aa10.11□□□□□ -0.79
NELFE-209ENST00000488426 C1RLQ9NZP8 487 aa10.11□□□□□ -0.79
NELFE-209ENST00000488426 TEX22C9J3V5 150 aa10.1□□□□□ -0.79
NELFE-209ENST00000488426 NUPL2O15504 423 aaKnown RBP10.1□□□□□ -0.79
NELFE-209ENST00000488426 NDUFS6O75380 124 aaKnown RBP10.1□□□□□ -0.79
NELFE-209ENST00000488426 MBP02144 154 aa10.1□□□□□ -0.79
NELFE-209ENST00000488426 SRD5A1P18405 259 aa10.1□□□□□ -0.79
NELFE-209ENST00000488426 GPX4P36969 197 aaPredicted RBP10.1□□□□□ -0.79
NELFE-209ENST00000488426 FHITP49789 147 aa10.1□□□□□ -0.79
NELFE-209ENST00000488426 PVRIGQ6DKI7 326 aa10.1□□□□□ -0.79
NELFE-209ENST00000488426 P2RX4Q99571 388 aa10.1□□□□□ -0.79
NELFE-209ENST00000488426 KCNIP2Q9NS61 270 aa10.1□□□□□ -0.79
NELFE-209ENST00000488426 LSM4Q9Y4Z0 139 aaKnown RBP10.1□□□□□ -0.79
NELFE-209ENST00000488426 FCN1O00602 326 aa10.1□□□□□ -0.79
NELFE-209ENST00000488426 TSPAN15O95858 294 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms