RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 ATP5SQ99766 215 aa11.4□□□□□ -0.58
LRIF1-202ENST00000485275 ZNF471Q9BX82 626 aaPredicted RBP11.4□□□□□ -0.58
LRIF1-202ENST00000485275 RFNGQ9Y644 331 aa11.4□□□□□ -0.58
LRIF1-202ENST00000485275 IGLV11-55A0A075B6I3 123 aa11.39□□□□□ -0.59
LRIF1-202ENST00000485275 HILS1P60008 231 aa11.39□□□□□ -0.59
LRIF1-202ENST00000485275 RAB11AP62491 216 aa11.39□□□□□ -0.59
LRIF1-202ENST00000485275 RPP30P78346 268 aaKnown RBP11.39□□□□□ -0.59
LRIF1-202ENST00000485275 VWC2Q2TAL6 325 aa11.39□□□□□ -0.59
LRIF1-202ENST00000485275 FAM110DQ8TAY7 271 aaPredicted RBP11.39□□□□□ -0.59
LRIF1-202ENST00000485275 IGHV3-21A0A0B4J1V1 117 aa11.39□□□□□ -0.59
LRIF1-202ENST00000485275 TRAV41A0A0B4J266 112 aa11.39□□□□□ -0.59
LRIF1-202ENST00000485275 UBE2L5PA0A1B0GUS4 154 aa11.39□□□□□ -0.59
LRIF1-202ENST00000485275 FAM181BA6NEQ2 426 aa11.39□□□□□ -0.59
LRIF1-202ENST00000485275 CLDN34H7C241 214 aa11.39□□□□□ -0.59
LRIF1-202ENST00000485275 HBG1P69891 147 aa11.39□□□□□ -0.59
LRIF1-202ENST00000485275 HBG2P69892 147 aa11.39□□□□□ -0.59
LRIF1-202ENST00000485275 CFHR3Q02985 330 aa11.39□□□□□ -0.59
LRIF1-202ENST00000485275 AKIRIN2Q53H80 203 aa11.39□□□□□ -0.59
LRIF1-202ENST00000485275 LILRB2Q8N423 598 aa11.39□□□□□ -0.59
LRIF1-202ENST00000485275 PINX1Q96BK5 328 aaKnown RBP11.39□□□□□ -0.59
LRIF1-202ENST00000485275 MISP3Q96FF7 219 aa11.39□□□□□ -0.59
LRIF1-202ENST00000485275 TAAR5O14804 337 aa11.38□□□□□ -0.59
LRIF1-202ENST00000485275 CRLF1O75462 422 aa11.38□□□□□ -0.59
LRIF1-202ENST00000485275 MDKP21741 143 aaPredicted RBP11.38□□□□□ -0.59
LRIF1-202ENST00000485275 PPIFP30405 207 aaKnown RBP11.38□□□□□ -0.59
LRIF1-202ENST00000485275 RUNX1Q01196 453 aa11.38□□□□□ -0.59
LRIF1-202ENST00000485275 CD69Q07108 199 aa11.38□□□□□ -0.59
LRIF1-202ENST00000485275 C10orf99Q6UWK7 81 aa11.38□□□□□ -0.59
LRIF1-202ENST00000485275 SLC51BQ86UW2 128 aa11.38□□□□□ -0.59
LRIF1-202ENST00000485275 MRPL41Q8IXM3 137 aaKnown RBP11.38□□□□□ -0.59
LRIF1-202ENST00000485275 STOML3Q8TAV4 291 aa11.38□□□□□ -0.59
LRIF1-202ENST00000485275 ST8SIA2Q92186 375 aa11.38□□□□□ -0.59
LRIF1-202ENST00000485275 IGKV1OR2-108A0A075B7D4 117 aa11.37□□□□□ -0.59
LRIF1-202ENST00000485275 TRIM77I1YAP6 450 aa11.37□□□□□ -0.59
LRIF1-202ENST00000485275 I3L2K1 104 aa11.37□□□□□ -0.59
LRIF1-202ENST00000485275 K7EIM0 57 aa11.37□□□□□ -0.59
LRIF1-202ENST00000485275 FAM157CP0CG43 387 aa11.37□□□□□ -0.59
LRIF1-202ENST00000485275 OPRK1P41145 380 aa11.37□□□□□ -0.59
LRIF1-202ENST00000485275 ATP5IP56385 69 aaPredicted RBP11.37□□□□□ -0.59
LRIF1-202ENST00000485275 DLK1P80370 383 aa11.37□□□□□ -0.59
LRIF1-202ENST00000485275 SRSF2Q01130 221 aaKnown RBP11.37□□□□□ -0.59
LRIF1-202ENST00000485275 SLC16A13Q7RTY0 426 aa11.37□□□□□ -0.59
LRIF1-202ENST00000485275 Q8N2B8 174 aa11.37□□□□□ -0.59
LRIF1-202ENST00000485275 UBAC2Q8NBM4 344 aa11.37□□□□□ -0.59
LRIF1-202ENST00000485275 OR2T6Q8NHC8 308 aa11.37□□□□□ -0.59
LRIF1-202ENST00000485275 RNASEH2CQ8TDP1 164 aaKnown RBP11.37□□□□□ -0.59
LRIF1-202ENST00000485275 TMEM147Q9BVK8 224 aa11.37□□□□□ -0.59
LRIF1-202ENST00000485275 NPFFR1Q9GZQ6 430 aa11.37□□□□□ -0.59
LRIF1-202ENST00000485275 SH3BGRL3Q9H299 93 aa11.37□□□□□ -0.59
LRIF1-202ENST00000485275 ARV1Q9H2C2 271 aa11.37□□□□□ -0.59
LRIF1-202ENST00000485275 TEP1Q99973 2627 aaKnown RBP11.37□□□□□ -0.59
LRIF1-202ENST00000485275 AP4M1O00189 453 aa11.36□□□□□ -0.59
LRIF1-202ENST00000485275 RNASE1P07998 156 aaKnown RBP11.36□□□□□ -0.59
LRIF1-202ENST00000485275 DEFA4P12838 97 aa11.36□□□□□ -0.59
LRIF1-202ENST00000485275 SUB1P53999 127 aaKnown RBP eCLIP11.36□□□□□ -0.59
LRIF1-202ENST00000485275 UBA52P62987 128 aaKnown RBP11.36□□□□□ -0.59
LRIF1-202ENST00000485275 SCGB2A2Q13296 93 aa11.36□□□□□ -0.59
LRIF1-202ENST00000485275 GAMTQ14353 236 aa11.36□□□□□ -0.59
LRIF1-202ENST00000485275 SLC25A24Q6NUK1 477 aa11.36□□□□□ -0.59
LRIF1-202ENST00000485275 TREML4Q6UXN2 200 aa11.36□□□□□ -0.59
LRIF1-202ENST00000485275 HSD17B11Q8NBQ5 300 aa11.36□□□□□ -0.59
LRIF1-202ENST00000485275 UQCC1Q9NVA1 299 aa11.36□□□□□ -0.59
LRIF1-202ENST00000485275 PLA2G2EQ9NZK7 142 aa11.36□□□□□ -0.59
LRIF1-202ENST00000485275 S4R3C0 116 aa11.36□□□□□ -0.59
LRIF1-202ENST00000485275 MT-CO2P00403 227 aa11.36□□□□□ -0.59
LRIF1-202ENST00000485275 KLK9Q2XQG4 91 aa11.36□□□□□ -0.59
LRIF1-202ENST00000485275 Q6ZSV7 163 aa11.36□□□□□ -0.59
LRIF1-202ENST00000485275 ZNF418Q8TF45 676 aaPredicted RBP11.36□□□□□ -0.59
LRIF1-202ENST00000485275 GON7Q9BXV9 100 aa11.36□□□□□ -0.59
LRIF1-202ENST00000485275 PRSS22Q9GZN4 317 aa11.36□□□□□ -0.59
LRIF1-202ENST00000485275 WDR61Q9GZS3 305 aaKnown RBP11.36□□□□□ -0.59
LRIF1-202ENST00000485275 SERTAD4Q9NUC0 356 aa11.36□□□□□ -0.59
LRIF1-202ENST00000485275 ZNF580Q9UK33 172 aa11.36□□□□□ -0.59
LRIF1-202ENST00000485275 KLK9Q9UKQ9 250 aa11.36□□□□□ -0.59
LRIF1-202ENST00000485275 LSM4Q9Y4Z0 139 aaKnown RBP11.36□□□□□ -0.59
LRIF1-202ENST00000485275 TRBV9A0A0B4J1U6 114 aa11.35□□□□□ -0.59
LRIF1-202ENST00000485275 SMCO3A2RU48 225 aa11.35□□□□□ -0.59
LRIF1-202ENST00000485275 MFSD2BA6NFX1 497 aa11.35□□□□□ -0.59
LRIF1-202ENST00000485275 OR2J3O76001 311 aa11.35□□□□□ -0.59
LRIF1-202ENST00000485275 DFFBO76075 338 aa11.35□□□□□ -0.59
LRIF1-202ENST00000485275 JTBO76095 146 aa11.35□□□□□ -0.59
LRIF1-202ENST00000485275 NDUFB8O95169 186 aa11.35□□□□□ -0.59
LRIF1-202ENST00000485275 ZNF266Q14584 549 aa11.35□□□□□ -0.59
LRIF1-202ENST00000485275 TEX261Q6UWH6 196 aa11.35□□□□□ -0.59
LRIF1-202ENST00000485275 LCNL1Q6ZST4 164 aa11.35□□□□□ -0.59
LRIF1-202ENST00000485275 BAP18Q8IXM2 172 aa11.35□□□□□ -0.59
LRIF1-202ENST00000485275 TMEM68Q96MH6 324 aa11.35□□□□□ -0.59
LRIF1-202ENST00000485275 RSG1Q9BU20 258 aa11.35□□□□□ -0.59
LRIF1-202ENST00000485275 GGACTQ9BVM4 153 aa11.35□□□□□ -0.59
LRIF1-202ENST00000485275 WDR83OSQ9Y284 106 aa11.35□□□□□ -0.59
LRIF1-202ENST00000485275 F8W735 103 aaPredicted RBP11.34□□□□□ -0.59
LRIF1-202ENST00000485275 C4BPBP20851 252 aa11.34□□□□□ -0.59
LRIF1-202ENST00000485275 ATP6V0CP27449 155 aa11.34□□□□□ -0.59
LRIF1-202ENST00000485275 EXOSC2Q13868 293 aaKnown RBP11.34□□□□□ -0.59
LRIF1-202ENST00000485275 ATP6V1FQ16864 119 aa11.34□□□□□ -0.59
LRIF1-202ENST00000485275 ALKAL2Q6UX46 152 aa11.34□□□□□ -0.59
LRIF1-202ENST00000485275 ZNF329Q86UD4 541 aa11.34□□□□□ -0.59
LRIF1-202ENST00000485275 MS4A10Q96PG2 267 aa11.34□□□□□ -0.59
LRIF1-202ENST00000485275 MGST2Q99735 147 aa11.34□□□□□ -0.59
LRIF1-202ENST00000485275 GINS3Q9BRX5 216 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms