RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 FLNAP21333 2647 aaKnown RBP10.18□□□□□ -0.78
VPS13D-205ENST00000473099 F8P00451 2351 aa10.17□□□□□ -0.78
VPS13D-205ENST00000473099 IGHV7-81A0A0B4J1V7 117 aa10.17□□□□□ -0.78
VPS13D-205ENST00000473099 SMCO3A2RU48 225 aa10.17□□□□□ -0.78
VPS13D-205ENST00000473099 A6NDX4 124 aa10.17□□□□□ -0.78
VPS13D-205ENST00000473099 NPIPB5A8MRT5 1133 aa10.17□□□□□ -0.78
VPS13D-205ENST00000473099 ZNF705EA8MWA4 302 aaPredicted RBP10.17□□□□□ -0.78
VPS13D-205ENST00000473099 CD5LO43866 347 aa10.17□□□□□ -0.78
VPS13D-205ENST00000473099 MBP02144 154 aa10.17□□□□□ -0.78
VPS13D-205ENST00000473099 PRH1P02810 166 aa10.17□□□□□ -0.78
VPS13D-205ENST00000473099 FAM157CP0CG43 387 aa10.17□□□□□ -0.78
VPS13D-205ENST00000473099 CTRB1P17538 263 aa10.17□□□□□ -0.78
VPS13D-205ENST00000473099 RIPPLY3P57055 190 aa10.17□□□□□ -0.78
VPS13D-205ENST00000473099 AKR1C1Q04828 323 aa10.17□□□□□ -0.78
VPS13D-205ENST00000473099 FBLN7Q53RD9 439 aa10.17□□□□□ -0.78
VPS13D-205ENST00000473099 CTRB2Q6GPI1 263 aa10.17□□□□□ -0.78
VPS13D-205ENST00000473099 TEPPQ6URK8 271 aa10.17□□□□□ -0.78
VPS13D-205ENST00000473099 BTNL8Q6UX41 500 aa10.17□□□□□ -0.78
VPS13D-205ENST00000473099 TMEM144Q7Z5S9 345 aa10.17□□□□□ -0.78
VPS13D-205ENST00000473099 SH3BGRL3Q9H299 93 aa10.17□□□□□ -0.78
VPS13D-205ENST00000473099 PFDN2Q9UHV9 154 aa10.17□□□□□ -0.78
VPS13D-205ENST00000473099 NUDT19A8MXV4 375 aa10.16□□□□□ -0.78
VPS13D-205ENST00000473099 SMAD7O15105 426 aaKnown RBP10.16□□□□□ -0.78
VPS13D-205ENST00000473099 CRYGCP07315 174 aa10.16□□□□□ -0.78
VPS13D-205ENST00000473099 DEFA4P12838 97 aa10.16□□□□□ -0.78
VPS13D-205ENST00000473099 AREGP15514 252 aa10.16□□□□□ -0.78
VPS13D-205ENST00000473099 OPRK1P41145 380 aa10.16□□□□□ -0.78
VPS13D-205ENST00000473099 RUNX1Q01196 453 aa10.16□□□□□ -0.78
VPS13D-205ENST00000473099 SCGB2A2Q13296 93 aa10.16□□□□□ -0.78
VPS13D-205ENST00000473099 ARSJQ5FYB0 599 aaPredicted RBP10.16□□□□□ -0.78
VPS13D-205ENST00000473099 TREML4Q6UXN2 200 aa10.16□□□□□ -0.78
VPS13D-205ENST00000473099 TMEM182Q6ZP80 229 aaPredicted RBP10.16□□□□□ -0.78
VPS13D-205ENST00000473099 SLC16A13Q7RTY0 426 aa10.16□□□□□ -0.78
VPS13D-205ENST00000473099 TTC9CQ8N5M4 171 aa10.16□□□□□ -0.78
VPS13D-205ENST00000473099 SGMS2Q8NHU3 365 aa10.16□□□□□ -0.78
VPS13D-205ENST00000473099 RSG1Q9BU20 258 aa10.16□□□□□ -0.78
VPS13D-205ENST00000473099 NPCDR1Q9BY65 106 aa10.16□□□□□ -0.78
VPS13D-205ENST00000473099 PRDM13Q9H4Q3 707 aa10.16□□□□□ -0.78
VPS13D-205ENST00000473099 PARP11Q9NR21 331 aa10.16□□□□□ -0.78
VPS13D-205ENST00000473099 LSM4Q9Y4Z0 139 aaKnown RBP10.16□□□□□ -0.78
VPS13D-205ENST00000473099 NF1P21359 2839 aa10.16□□□□□ -0.78
VPS13D-205ENST00000473099 TEX46H3BTG2 121 aa10.15□□□□□ -0.78
VPS13D-205ENST00000473099 REG1AP05451 166 aa10.15□□□□□ -0.78
VPS13D-205ENST00000473099 HNF1AP20823 631 aa10.15□□□□□ -0.78
VPS13D-205ENST00000473099 CAMLGP49069 296 aa10.15□□□□□ -0.78
VPS13D-205ENST00000473099 DEFB112Q30KQ8 113 aa10.15□□□□□ -0.78
VPS13D-205ENST00000473099 SPNS3Q6ZMD2 512 aa10.15□□□□□ -0.78
VPS13D-205ENST00000473099 CIARTQ8N365 385 aaPredicted RBP10.15□□□□□ -0.78
VPS13D-205ENST00000473099 THYN1Q9P016 225 aa10.15□□□□□ -0.78
VPS13D-205ENST00000473099 HIST1H1BP16401 226 aaKnown RBP10.14□□□□□ -0.79
VPS13D-205ENST00000473099 IER3P46695 156 aa10.14□□□□□ -0.79
VPS13D-205ENST00000473099 CRIP2P52943 208 aaPredicted RBP10.14□□□□□ -0.79
VPS13D-205ENST00000473099 GAMTQ14353 236 aa10.14□□□□□ -0.79
VPS13D-205ENST00000473099 AKIRIN2Q53H80 203 aa10.14□□□□□ -0.79
VPS13D-205ENST00000473099 TMEM41BQ5BJD5 291 aa10.14□□□□□ -0.79
VPS13D-205ENST00000473099 TMEM219Q86XT9 240 aa10.14□□□□□ -0.79
VPS13D-205ENST00000473099 MISP3Q96FF7 219 aa10.14□□□□□ -0.79
VPS13D-205ENST00000473099 WNT10AQ9GZT5 417 aa10.14□□□□□ -0.79
VPS13D-205ENST00000473099 ZANQ9Y493 2812 aa10.13□□□□□ -0.79
VPS13D-205ENST00000473099 HBE1P02100 147 aa10.13□□□□□ -0.79
VPS13D-205ENST00000473099 RPL29P47914 159 aaKnown RBP10.13□□□□□ -0.79
VPS13D-205ENST00000473099 RAB2AP61019 212 aa10.13□□□□□ -0.79
VPS13D-205ENST00000473099 NDPQ00604 133 aa10.13□□□□□ -0.79
VPS13D-205ENST00000473099 LY6EQ16553 131 aa10.13□□□□□ -0.79
VPS13D-205ENST00000473099 ACOT6Q3I5F7 207 aaPredicted RBP10.13□□□□□ -0.79
VPS13D-205ENST00000473099 PXDC1Q5TGL8 231 aa10.13□□□□□ -0.79
VPS13D-205ENST00000473099 Q6YL49 198 aa10.13□□□□□ -0.79
VPS13D-205ENST00000473099 Q6ZRG5 221 aa10.13□□□□□ -0.79
VPS13D-205ENST00000473099 BCL6BQ8N143 479 aaPredicted RBP10.13□□□□□ -0.79
VPS13D-205ENST00000473099 COMMD1Q8N668 190 aa10.13□□□□□ -0.79
VPS13D-205ENST00000473099 THAP8Q8NA92 274 aa10.13□□□□□ -0.79
VPS13D-205ENST00000473099 LFNGQ8NES3 379 aa10.13□□□□□ -0.79
VPS13D-205ENST00000473099 FAM110DQ8TAY7 271 aaPredicted RBP10.13□□□□□ -0.79
VPS13D-205ENST00000473099 TMEM160Q9NX00 188 aa10.13□□□□□ -0.79
VPS13D-205ENST00000473099 TLN2Q9Y4G6 2542 aa10.13□□□□□ -0.79
VPS13D-205ENST00000473099 SETD2Q9BYW2 2564 aaPredicted RBP10.12□□□□□ -0.79
VPS13D-205ENST00000473099 AGPAT2O15120 278 aa10.12□□□□□ -0.79
VPS13D-205ENST00000473099 ATP6V0E1O15342 81 aa10.12□□□□□ -0.79
VPS13D-205ENST00000473099 TSPAN15O95858 294 aa10.12□□□□□ -0.79
VPS13D-205ENST00000473099 IGHG2P01859 326 aa10.12□□□□□ -0.79
VPS13D-205ENST00000473099 APELAP0DMC3 54 aa10.12□□□□□ -0.79
VPS13D-205ENST00000473099 SRP14P37108 136 aaKnown RBP10.12□□□□□ -0.79
VPS13D-205ENST00000473099 MFAP2P55001 183 aa10.12□□□□□ -0.79
VPS13D-205ENST00000473099 SELENOTP62341 195 aa10.12□□□□□ -0.79
VPS13D-205ENST00000473099 KLK9Q2XQG4 91 aa10.12□□□□□ -0.79
VPS13D-205ENST00000473099 FFAR4Q5NUL3 377 aa10.12□□□□□ -0.79
VPS13D-205ENST00000473099 ASPHD1Q5U4P2 390 aa10.12□□□□□ -0.79
VPS13D-205ENST00000473099 IL34Q6ZMJ4 242 aa10.12□□□□□ -0.79
VPS13D-205ENST00000473099 TMEM86BQ8N661 226 aa10.12□□□□□ -0.79
VPS13D-205ENST00000473099 TMEM116Q8NCL8 245 aa10.12□□□□□ -0.79
VPS13D-205ENST00000473099 LYPD6BQ8NI32 183 aa10.12□□□□□ -0.79
VPS13D-205ENST00000473099 FAM213BQ8TBF2 198 aa10.12□□□□□ -0.79
VPS13D-205ENST00000473099 PCNPQ8WW12 178 aaKnown RBP10.12□□□□□ -0.79
VPS13D-205ENST00000473099 MGST2Q99735 147 aa10.12□□□□□ -0.79
VPS13D-205ENST00000473099 HSPB9Q9BQS6 159 aa10.12□□□□□ -0.79
VPS13D-205ENST00000473099 FAM103A1Q9BTL3 118 aaKnown RBP10.12□□□□□ -0.79
VPS13D-205ENST00000473099 TMUB1Q9BVT8 246 aa10.12□□□□□ -0.79
VPS13D-205ENST00000473099 GGTLC1Q9BX51 225 aa10.12□□□□□ -0.79
VPS13D-205ENST00000473099 FNDC4Q9H6D8 234 aaPredicted RBP10.12□□□□□ -0.79
VPS13D-205ENST00000473099 PLA2G2EQ9NZK7 142 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms