RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 EEF1AKMT3Q96AZ1 226 aa12.2□□□□□ -0.46
ITGB1-207ENST00000439974 MISP3Q96FF7 219 aa12.2□□□□□ -0.46
ITGB1-207ENST00000439974 PDCD10Q9BUL8 212 aa12.2□□□□□ -0.46
ITGB1-207ENST00000439974 C19orf73Q9NVV2 129 aa12.2□□□□□ -0.46
ITGB1-207ENST00000439974 IGHV3-35A0A0C4DH35 117 aa12.19□□□□□ -0.46
ITGB1-207ENST00000439974 LYRM1O43325 122 aa12.19□□□□□ -0.46
ITGB1-207ENST00000439974 SFT2D2O95562 160 aa12.19□□□□□ -0.46
ITGB1-207ENST00000439974 ANXA3P12429 323 aa12.19□□□□□ -0.46
ITGB1-207ENST00000439974 EDN2P20800 178 aa12.19□□□□□ -0.46
ITGB1-207ENST00000439974 GPR183P32249 361 aa12.19□□□□□ -0.46
ITGB1-207ENST00000439974 ARL3P36405 182 aa12.19□□□□□ -0.46
ITGB1-207ENST00000439974 KLK9Q2XQG4 91 aa12.19□□□□□ -0.46
ITGB1-207ENST00000439974 HSD17B13Q7Z5P4 300 aaPredicted RBP12.19□□□□□ -0.46
ITGB1-207ENST00000439974 LGI3Q8N145 548 aa12.19□□□□□ -0.46
ITGB1-207ENST00000439974 CITED4Q96RK1 184 aa12.19□□□□□ -0.46
ITGB1-207ENST00000439974 SIGLEC8Q9NYZ4 499 aa12.19□□□□□ -0.46
ITGB1-207ENST00000439974 KLK9Q9UKQ9 250 aa12.19□□□□□ -0.46
ITGB1-207ENST00000439974 SELENOKQ9Y6D0 94 aa12.19□□□□□ -0.46
ITGB1-207ENST00000439974 K7EIM0 57 aa12.18□□□□□ -0.46
ITGB1-207ENST00000439974 CLEC3BP05452 202 aa12.18□□□□□ -0.46
ITGB1-207ENST00000439974 LYL1P12980 280 aa12.18□□□□□ -0.46
ITGB1-207ENST00000439974 LCN12Q6JVE5 192 aa12.18□□□□□ -0.46
ITGB1-207ENST00000439974 FAM219AQ8IW50 185 aa12.18□□□□□ -0.46
ITGB1-207ENST00000439974 ZNF502Q8TBZ5 544 aa12.18□□□□□ -0.46
ITGB1-207ENST00000439974 S100ZQ8WXG8 99 aa12.18□□□□□ -0.46
ITGB1-207ENST00000439974 IL22RA2Q969J5 263 aa12.18□□□□□ -0.46
ITGB1-207ENST00000439974 C7orf50Q9BRJ6 194 aaKnown RBP12.18□□□□□ -0.46
ITGB1-207ENST00000439974 CCDC32Q9BV29 185 aa12.18□□□□□ -0.46
ITGB1-207ENST00000439974 PALMDQ9NP74 551 aa12.18□□□□□ -0.46
ITGB1-207ENST00000439974 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.18□□□□□ -0.46
ITGB1-207ENST00000439974 A0A0B4J2A0 478 aa12.17□□□□□ -0.46
ITGB1-207ENST00000439974 OR2T8A6NH00 312 aa12.17□□□□□ -0.46
ITGB1-207ENST00000439974 CSN3P07498 182 aa12.17□□□□□ -0.46
ITGB1-207ENST00000439974 HOXB5P09067 269 aa12.17□□□□□ -0.46
ITGB1-207ENST00000439974 SULT1A3P0DMM9 295 aa12.17□□□□□ -0.46
ITGB1-207ENST00000439974 SULT1A4P0DMN0 295 aa12.17□□□□□ -0.46
ITGB1-207ENST00000439974 ERHP84090 104 aaKnown RBP12.17□□□□□ -0.46
ITGB1-207ENST00000439974 NMSQ5H8A3 153 aa12.17□□□□□ -0.46
ITGB1-207ENST00000439974 GTSCR1Q86UQ5 136 aa12.17□□□□□ -0.46
ITGB1-207ENST00000439974 UBAC2Q8NBM4 344 aa12.17□□□□□ -0.46
ITGB1-207ENST00000439974 OR1P1Q8NH06 330 aa12.17□□□□□ -0.46
ITGB1-207ENST00000439974 SCARB1Q8WTV0 552 aa12.17□□□□□ -0.46
ITGB1-207ENST00000439974 PINX1Q96BK5 328 aaKnown RBP12.17□□□□□ -0.46
ITGB1-207ENST00000439974 CXorf58Q96LI9 332 aa12.17□□□□□ -0.46
ITGB1-207ENST00000439974 ENY2Q9NPA8 101 aa12.17□□□□□ -0.46
ITGB1-207ENST00000439974 PEMTQ9UBM1 199 aa12.17□□□□□ -0.46
ITGB1-207ENST00000439974 SHPKQ9UHJ6 478 aa12.17□□□□□ -0.46
ITGB1-207ENST00000439974 TBC1D24Q9ULP9 559 aa12.17□□□□□ -0.46
ITGB1-207ENST00000439974 TRAV6A0A075B6T7 132 aa12.16□□□□□ -0.46
ITGB1-207ENST00000439974 C9orf170A2RU37 121 aa12.16□□□□□ -0.46
ITGB1-207ENST00000439974 CEBPZOSA8MTT3 80 aa12.16□□□□□ -0.46
ITGB1-207ENST00000439974 SPCS3P61009 180 aa12.16□□□□□ -0.46
ITGB1-207ENST00000439974 IFITM3Q01628 133 aa12.16□□□□□ -0.46
ITGB1-207ENST00000439974 ZNF846Q147U1 533 aa12.16□□□□□ -0.46
ITGB1-207ENST00000439974 OR52B4Q8NGK2 314 aa12.16□□□□□ -0.46
ITGB1-207ENST00000439974 THYN1Q9P016 225 aa12.16□□□□□ -0.46
ITGB1-207ENST00000439974 LYSTQ99698 3801 aa12.16□□□□□ -0.46
ITGB1-207ENST00000439974 TRBV7-1A0A0A6YYK4 115 aa12.15□□□□□ -0.46
ITGB1-207ENST00000439974 F8W735 103 aaPredicted RBP12.15□□□□□ -0.46
ITGB1-207ENST00000439974 CYB5BO43169 146 aa12.15□□□□□ -0.46
ITGB1-207ENST00000439974 GGCTO75223 188 aaKnown RBP12.15□□□□□ -0.46
ITGB1-207ENST00000439974 MT-CO2P00403 227 aa12.15□□□□□ -0.46
ITGB1-207ENST00000439974 OR4E1P0C645 316 aa12.15□□□□□ -0.46
ITGB1-207ENST00000439974 RNASE2P10153 161 aaKnown RBP12.15□□□□□ -0.46
ITGB1-207ENST00000439974 SNCAP37840 140 aa12.15□□□□□ -0.46
ITGB1-207ENST00000439974 UBE2MP61081 183 aaKnown RBP12.15□□□□□ -0.46
ITGB1-207ENST00000439974 SRPXP78539 464 aa12.15□□□□□ -0.46
ITGB1-207ENST00000439974 SMCO1Q147U7 214 aa12.15□□□□□ -0.46
ITGB1-207ENST00000439974 C4orf46Q504U0 113 aa12.15□□□□□ -0.46
ITGB1-207ENST00000439974 Q56UQ5 140 aa12.15□□□□□ -0.46
ITGB1-207ENST00000439974 LINC00299Q6ZSB3 139 aa12.15□□□□□ -0.46
ITGB1-207ENST00000439974 OR2K2Q8NGT1 345 aa12.15□□□□□ -0.46
ITGB1-207ENST00000439974 OR1S1Q8NH92 325 aa12.15□□□□□ -0.46
ITGB1-207ENST00000439974 VN1R17PQ8TDU5 208 aa12.15□□□□□ -0.46
ITGB1-207ENST00000439974 SPATA25Q9BR10 227 aa12.15□□□□□ -0.46
ITGB1-207ENST00000439974 WDR12Q9GZL7 423 aaKnown RBP12.15□□□□□ -0.46
ITGB1-207ENST00000439974 C20orf85Q9H1P6 137 aa12.15□□□□□ -0.46
ITGB1-207ENST00000439974 HEYLQ9NQ87 328 aaPredicted RBP12.15□□□□□ -0.46
ITGB1-207ENST00000439974 C21orf62Q9NYP8 219 aa12.15□□□□□ -0.46
ITGB1-207ENST00000439974 IGHV3OR16-8A0A075B7F1 116 aa12.14□□□□□ -0.47
ITGB1-207ENST00000439974 ZNF320A2RRD8 509 aa12.14□□□□□ -0.47
ITGB1-207ENST00000439974 I3L2K1 104 aa12.14□□□□□ -0.47
ITGB1-207ENST00000439974 ADAP1O75689 374 aa12.14□□□□□ -0.47
ITGB1-207ENST00000439974 TCRBP04435 133 aa12.14□□□□□ -0.47
ITGB1-207ENST00000439974 DHRS2Q13268 280 aa12.14□□□□□ -0.47
ITGB1-207ENST00000439974 MLANAQ16655 118 aa12.14□□□□□ -0.47
ITGB1-207ENST00000439974 AARDQ4LEZ3 155 aa12.14□□□□□ -0.47
ITGB1-207ENST00000439974 FAM209BQ5JX69 171 aa12.14□□□□□ -0.47
ITGB1-207ENST00000439974 ZNF114Q8NC26 417 aa12.14□□□□□ -0.47
ITGB1-207ENST00000439974 CACNG8Q8WXS5 425 aa12.14□□□□□ -0.47
ITGB1-207ENST00000439974 CHRDL1Q9BU40 450 aa12.14□□□□□ -0.47
ITGB1-207ENST00000439974 RBKSQ9H477 322 aa12.14□□□□□ -0.47
ITGB1-207ENST00000439974 TUBA4BQ9H853 241 aa12.14□□□□□ -0.47
ITGB1-207ENST00000439974 EDA2RQ9HAV5 297 aa12.14□□□□□ -0.47
ITGB1-207ENST00000439974 TENM2Q9NT68 2774 aa12.13□□□□□ -0.47
ITGB1-207ENST00000439974 CSMD3Q7Z407 3707 aa12.13□□□□□ -0.47
ITGB1-207ENST00000439974 DNAH1Q9P2D7 4330 aa12.13□□□□□ -0.47
ITGB1-207ENST00000439974 IZUMO1RA6ND01 250 aa12.13□□□□□ -0.47
ITGB1-207ENST00000439974 MPTX1A8MV57 137 aa12.13□□□□□ -0.47
ITGB1-207ENST00000439974 UPK1BO75841 260 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms