RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 GABARAPO95166 117 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 IGLV2-23P01705 113 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 IGHV3-23P01764 117 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 MAS1P04201 325 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 LINC00869P0C866 280 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 ZNF823P16415 610 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 CRISP2P16562 243 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 NFYBP25208 207 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 ATP6V0CP27449 155 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 ZNF83P51522 516 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 KRTAP10-3P60369 221 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 MEF2BQ02080 365 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 HSD52Q0P140 79 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 LAIR2Q6ISS4 152 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 LYPD2Q6UXB3 125 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 TMUB2Q71RG4 321 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 RPP25LQ8N5L8 163 aaKnown RBP2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 ZNF709Q8N972 641 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 NPBQ8NG41 125 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 OR4S1Q8NGB4 309 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 OR4K5Q8NGD3 323 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 OR5C1Q8NGR4 320 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 OR2T10Q8NGZ9 312 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 PPTC7Q8NI37 304 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 DEDD2Q8WXF8 326 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 TMEM190Q8WZ59 177 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 H1FXQ92522 213 aaKnown RBP2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 VSIG2Q96IQ7 327 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 PGLYRP2Q96PD5 576 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 SMIM14Q96QK8 99 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 LINC00597Q9H2U6 94 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 RNF122Q9H9V4 155 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 FRMPD1Q5SYB0 1578 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 ZNF106Q9H2Y7 1883 aaKnown RBP2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 DOCK5Q9H7D0 1870 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 TRPM1Q7Z4N2 1603 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 MYO3AQ8NEV4 1616 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 CCDC141Q6ZP82 1450 aa2.59□□□□□ -1.99
HMGB1P12-201ENST00000438594 IGKV1-6A0A0C4DH72 117 aa2.59□□□□□ -1.99
HMGB1P12-201ENST00000438594 TRBV7-6A0A0J9YX20 115 aa2.59□□□□□ -1.99
HMGB1P12-201ENST00000438594 A0A0J9YXY3 114 aa2.59□□□□□ -1.99
HMGB1P12-201ENST00000438594 FAM236AA0A1B0GUQ0 79 aa2.59□□□□□ -1.99
HMGB1P12-201ENST00000438594 FAM236BA0A1B0GV22 79 aa2.59□□□□□ -1.99
HMGB1P12-201ENST00000438594 H3BQF6 201 aa2.59□□□□□ -1.99
HMGB1P12-201ENST00000438594 M0R378 163 aa2.59□□□□□ -1.99
HMGB1P12-201ENST00000438594 TAX1BP3O14907 124 aa2.59□□□□□ -1.99
HMGB1P12-201ENST00000438594 PLA2G10O15496 165 aa2.59□□□□□ -1.99
HMGB1P12-201ENST00000438594 OR2T1O43869 369 aa2.59□□□□□ -1.99
HMGB1P12-201ENST00000438594 LY6G6DO95868 133 aa2.59□□□□□ -1.99
HMGB1P12-201ENST00000438594 NCR2O95944 276 aa2.59□□□□□ -1.99
HMGB1P12-201ENST00000438594 IGKV1-39P01597 117 aa2.59□□□□□ -1.99
HMGB1P12-201ENST00000438594 IGKV1-5P01602 117 aa2.59□□□□□ -1.99
HMGB1P12-201ENST00000438594 IGKV1D-39P04432 117 aa2.59□□□□□ -1.99
HMGB1P12-201ENST00000438594 SEC11BP0C7V7 166 aa2.59□□□□□ -1.99
HMGB1P12-201ENST00000438594 S100A2P29034 98 aa2.59□□□□□ -1.99
HMGB1P12-201ENST00000438594 CASP1P29466 404 aa2.59□□□□□ -1.99
HMGB1P12-201ENST00000438594 TMBIM6P55061 237 aa2.59□□□□□ -1.99
HMGB1P12-201ENST00000438594 FOXA3P55318 350 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P12-201ENST00000438594 HOXC5Q00444 222 aa2.59□□□□□ -1.99
HMGB1P12-201ENST00000438594 RRN3P1Q2M238 152 aa2.59□□□□□ -1.99
HMGB1P12-201ENST00000438594 SLC25A34Q6PIV7 304 aa2.59□□□□□ -1.99
HMGB1P12-201ENST00000438594 GKN2Q86XP6 184 aa2.59□□□□□ -1.99
HMGB1P12-201ENST00000438594 MSRB3Q8IXL7 192 aa2.59□□□□□ -1.99
HMGB1P12-201ENST00000438594 MMGT1Q8N4V1 131 aa2.59□□□□□ -1.99
HMGB1P12-201ENST00000438594 PACRGLQ8N7B6 248 aa2.59□□□□□ -1.99
HMGB1P12-201ENST00000438594 SLC25A29Q8N8R3 303 aa2.59□□□□□ -1.99
HMGB1P12-201ENST00000438594 Q8NBF4 154 aa2.59□□□□□ -1.99
HMGB1P12-201ENST00000438594 C1QTNF6Q9BXI9 259 aa2.59□□□□□ -1.99
HMGB1P12-201ENST00000438594 KRTAP4-3Q9BYR4 195 aa2.59□□□□□ -1.99
HMGB1P12-201ENST00000438594 TUBA4BQ9H853 241 aa2.59□□□□□ -1.99
HMGB1P12-201ENST00000438594 TAC3Q9UHF0 121 aa2.59□□□□□ -1.99
HMGB1P12-201ENST00000438594 HSPE1-MOB4S4R3N1 261 aa2.59□□□□□ -1.99
HMGB1P12-201ENST00000438594 IQGAP1P46940 1657 aa2.59□□□□□ -2
HMGB1P12-201ENST00000438594 PCM1Q15154 2024 aa2.59□□□□□ -2
HMGB1P12-201ENST00000438594 SPHKAPQ2M3C7 1700 aa2.59□□□□□ -2
HMGB1P12-201ENST00000438594 PKD1L2Q7Z442 2459 aa2.59□□□□□ -2
HMGB1P12-201ENST00000438594 TNS2Q63HR2 1409 aa2.59□□□□□ -2
HMGB1P12-201ENST00000438594 NRXN1Q9ULB1 1477 aa2.58□□□□□ -2
HMGB1P12-201ENST00000438594 TRPM2O94759 1503 aa2.58□□□□□ -2
HMGB1P12-201ENST00000438594 PIK3C2BO00750 1634 aa2.58□□□□□ -2
HMGB1P12-201ENST00000438594 MADDQ8WXG6 1647 aa2.58□□□□□ -2
HMGB1P12-201ENST00000438594 TET3O43151 1660 aa2.58□□□□□ -2
HMGB1P12-201ENST00000438594 MYOM1P52179 1685 aa2.58□□□□□ -2
HMGB1P12-201ENST00000438594 PPRC1Q5VV67 1664 aaKnown RBP2.58□□□□□ -2
HMGB1P12-201ENST00000438594 CACNA1AO00555 2505 aa2.58□□□□□ -2
HMGB1P12-201ENST00000438594 A0A087X002 238 aa2.58□□□□□ -2
HMGB1P12-201ENST00000438594 IGKV1-12A0A0C4DH73 117 aa2.58□□□□□ -2
HMGB1P12-201ENST00000438594 ODAMA1E959 279 aa2.58□□□□□ -2
HMGB1P12-201ENST00000438594 MEIS3P1A6NDR6 274 aa2.58□□□□□ -2
HMGB1P12-201ENST00000438594 PMS2P5A8MQ11 134 aa2.58□□□□□ -2
HMGB1P12-201ENST00000438594 UBE2L6O14933 153 aa2.58□□□□□ -2
HMGB1P12-201ENST00000438594 IGKV1D-12P01611 117 aa2.58□□□□□ -2
HMGB1P12-201ENST00000438594 SRP19P09132 144 aaKnown RBP2.58□□□□□ -2
HMGB1P12-201ENST00000438594 PATE4P0C8F1 98 aa2.58□□□□□ -2
HMGB1P12-201ENST00000438594 ZNF705DP0CH99 300 aaPredicted RBP2.58□□□□□ -2
HMGB1P12-201ENST00000438594 CRHBPP24387 322 aa2.58□□□□□ -2
HMGB1P12-201ENST00000438594 PSMB8P28062 276 aa2.58□□□□□ -2
HMGB1P12-201ENST00000438594 SDC2P34741 201 aa2.58□□□□□ -2
HMGB1P12-201ENST00000438594 FGF12P61328 243 aa2.58□□□□□ -2
HMGB1P12-201ENST00000438594 MSMO1Q15800 293 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms