RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 CHRNA7P36544 502 aa19.52■□□□□ 0.72
SSBP4-201ENST00000270061 F2RL1P55085 397 aa19.52■□□□□ 0.72
SSBP4-201ENST00000270061 BSXQ3C1V8 233 aa19.52■□□□□ 0.72
SSBP4-201ENST00000270061 PXDC1Q5TGL8 231 aa19.52■□□□□ 0.72
SSBP4-201ENST00000270061 CENPVQ7Z7K6 275 aaPredicted RBP19.52■□□□□ 0.72
SSBP4-201ENST00000270061 LYPD6BQ8NI32 183 aa19.52■□□□□ 0.72
SSBP4-201ENST00000270061 SIGLEC9Q9Y336 463 aa19.52■□□□□ 0.72
SSBP4-201ENST00000270061 PRSS8Q16651 343 aa19.52■□□□□ 0.71
SSBP4-201ENST00000270061 TMEM182Q6ZP80 229 aaPredicted RBP19.52■□□□□ 0.71
SSBP4-201ENST00000270061 MALSU1Q96EH3 234 aa19.52■□□□□ 0.71
SSBP4-201ENST00000270061 TIMM9Q9Y5J7 89 aa19.52■□□□□ 0.71
SSBP4-201ENST00000270061 PKD1L1Q8TDX9 2849 aa19.52■□□□□ 0.71
SSBP4-201ENST00000270061 TNCP24821 2201 aa19.51■□□□□ 0.71
SSBP4-201ENST00000270061 OPN1MWP04001 364 aa19.51■□□□□ 0.71
SSBP4-201ENST00000270061 OPN1MW2P0DN77 364 aa19.51■□□□□ 0.71
SSBP4-201ENST00000270061 OPN1MW3P0DN78 364 aa19.51■□□□□ 0.71
SSBP4-201ENST00000270061 PAX6P26367 422 aa19.51■□□□□ 0.71
SSBP4-201ENST00000270061 CNTFRP26992 372 aa19.51■□□□□ 0.71
SSBP4-201ENST00000270061 BTNL8Q6UX41 500 aa19.51■□□□□ 0.71
SSBP4-201ENST00000270061 SGMS2Q8NHU3 365 aa19.51■□□□□ 0.71
SSBP4-201ENST00000270061 MARC2Q969Z3 335 aa19.51■□□□□ 0.71
SSBP4-201ENST00000270061 TPSG1Q9NRR2 321 aa19.51■□□□□ 0.71
SSBP4-201ENST00000270061 RFNGQ9Y644 331 aa19.51■□□□□ 0.71
SSBP4-201ENST00000270061 UBE2L5PA0A1B0GUS4 154 aa19.5■□□□□ 0.71
SSBP4-201ENST00000270061 CA2P00918 260 aa19.5■□□□□ 0.71
SSBP4-201ENST00000270061 DLK1P80370 383 aa19.5■□□□□ 0.71
SSBP4-201ENST00000270061 SERF2P84101 59 aa19.5■□□□□ 0.71
SSBP4-201ENST00000270061 SSX2Q16385 188 aa19.5■□□□□ 0.71
SSBP4-201ENST00000270061 C2orf83Q53S99 150 aa19.5■□□□□ 0.71
SSBP4-201ENST00000270061 Q6ZRG5 221 aa19.5■□□□□ 0.71
SSBP4-201ENST00000270061 CLPSL1A2RUU4 121 aa19.49■□□□□ 0.71
SSBP4-201ENST00000270061 RAB19A4D1S5 217 aa19.49■□□□□ 0.71
SSBP4-201ENST00000270061 CGB1A6NKQ9 187 aa19.49■□□□□ 0.71
SSBP4-201ENST00000270061 MOSP00540 346 aa19.49■□□□□ 0.71
SSBP4-201ENST00000270061 ERHP84090 104 aaKnown RBP19.49■□□□□ 0.71
SSBP4-201ENST00000270061 PPP1R27Q86WC6 154 aa19.49■□□□□ 0.71
SSBP4-201ENST00000270061 DYNAPQ8N1N2 210 aa19.49■□□□□ 0.71
SSBP4-201ENST00000270061 NPBQ8NG41 125 aa19.49■□□□□ 0.71
SSBP4-201ENST00000270061 METTL1Q9UBP6 276 aaKnown RBP19.49■□□□□ 0.71
SSBP4-201ENST00000270061 MGAM2Q2M2H8 2515 aa19.49■□□□□ 0.71
SSBP4-201ENST00000270061 E7EUB6 86 aa19.49■□□□□ 0.71
SSBP4-201ENST00000270061 IFNA4P05014 189 aa19.49■□□□□ 0.71
SSBP4-201ENST00000270061 CAMLGP49069 296 aa19.49■□□□□ 0.71
SSBP4-201ENST00000270061 EBI3Q14213 229 aa19.49■□□□□ 0.71
SSBP4-201ENST00000270061 DPPA3Q6W0C5 159 aa19.49■□□□□ 0.71
SSBP4-201ENST00000270061 IL34Q6ZMJ4 242 aa19.49■□□□□ 0.71
SSBP4-201ENST00000270061 PRH1P02810 166 aa19.48■□□□□ 0.71
SSBP4-201ENST00000270061 PJVKQ0ZLH3 352 aa19.48■□□□□ 0.71
SSBP4-201ENST00000270061 OR10W1Q8NGF6 305 aa19.48■□□□□ 0.71
SSBP4-201ENST00000270061 OR2T10Q8NGZ9 312 aa19.48■□□□□ 0.71
SSBP4-201ENST00000270061 RSG1Q9BU20 258 aa19.48■□□□□ 0.71
SSBP4-201ENST00000270061 FNDC10F2Z333 226 aa19.47■□□□□ 0.71
SSBP4-201ENST00000270061 NDUFA3O95167 84 aa19.47■□□□□ 0.71
SSBP4-201ENST00000270061 IGKV1D-33P01593 117 aa19.47■□□□□ 0.71
SSBP4-201ENST00000270061 IGKV1-33P01594 117 aa19.47■□□□□ 0.71
SSBP4-201ENST00000270061 RNASE2P10153 161 aaKnown RBP19.47■□□□□ 0.71
SSBP4-201ENST00000270061 LY6EQ16553 131 aa19.47■□□□□ 0.71
SSBP4-201ENST00000270061 AKR1C8PQ5T2L2 129 aa19.47■□□□□ 0.71
SSBP4-201ENST00000270061 LINC01006Q8NI28 216 aa19.47■□□□□ 0.71
SSBP4-201ENST00000270061 EAF1Q96JC9 268 aaPredicted RBP19.47■□□□□ 0.71
SSBP4-201ENST00000270061 WDR83OSQ9Y284 106 aa19.47■□□□□ 0.71
SSBP4-201ENST00000270061 TEX46H3BTG2 121 aa19.47■□□□□ 0.71
SSBP4-201ENST00000270061 Q6ZSV7 163 aa19.47■□□□□ 0.71
SSBP4-201ENST00000270061 WFDC12Q8WWY7 111 aa19.47■□□□□ 0.71
SSBP4-201ENST00000270061 HRH4Q9H3N8 390 aa19.47■□□□□ 0.71
SSBP4-201ENST00000270061 FBXO7Q9Y3I1 522 aa19.47■□□□□ 0.71
SSBP4-201ENST00000270061 RNF114Q9Y508 228 aa19.47■□□□□ 0.71
SSBP4-201ENST00000270061 A0A1B0GW64 132 aa19.46■□□□□ 0.71
SSBP4-201ENST00000270061 MPDU1O75352 247 aa19.46■□□□□ 0.71
SSBP4-201ENST00000270061 ACTL6BO94805 426 aa19.46■□□□□ 0.71
SSBP4-201ENST00000270061 SNCAP37840 140 aa19.46■□□□□ 0.71
SSBP4-201ENST00000270061 MRPL41Q8IXM3 137 aaKnown RBP19.46■□□□□ 0.71
SSBP4-201ENST00000270061 FBXL15Q9H469 300 aa19.46■□□□□ 0.71
SSBP4-201ENST00000270061 NBR2O15453 112 aa19.45■□□□□ 0.7
SSBP4-201ENST00000270061 FGF7P21781 194 aa19.45■□□□□ 0.7
SSBP4-201ENST00000270061 FHITP49789 147 aa19.45■□□□□ 0.7
SSBP4-201ENST00000270061 C10orf55Q5SWW7 151 aa19.45■□□□□ 0.7
SSBP4-201ENST00000270061 UQCC3Q6UW78 93 aa19.45■□□□□ 0.7
SSBP4-201ENST00000270061 Q8N6K4 173 aa19.45■□□□□ 0.7
SSBP4-201ENST00000270061 I3L521 148 aa19.44■□□□□ 0.7
SSBP4-201ENST00000270061 SNRNP70P08621 437 aaKnown RBP19.44■□□□□ 0.7
SSBP4-201ENST00000270061 RPL27AP46776 148 aaKnown RBP19.44■□□□□ 0.7
SSBP4-201ENST00000270061 WT1-ASQ06250 92 aa19.44■□□□□ 0.7
SSBP4-201ENST00000270061 MMDQ15546 238 aa19.44■□□□□ 0.7
SSBP4-201ENST00000270061 FAM213BQ8TBF2 198 aa19.44■□□□□ 0.7
SSBP4-201ENST00000270061 TSPAN9O75954 239 aa19.44■□□□□ 0.7
SSBP4-201ENST00000270061 TNXAQ16473 311 aa19.44■□□□□ 0.7
SSBP4-201ENST00000270061 COMMD1Q8N668 190 aa19.44■□□□□ 0.7
SSBP4-201ENST00000270061 NPCDR1Q9BY65 106 aa19.44■□□□□ 0.7
SSBP4-201ENST00000270061 C16orf95Q9H693 158 aa19.44■□□□□ 0.7
SSBP4-201ENST00000270061 NPVFQ9HCQ7 196 aa19.44■□□□□ 0.7
SSBP4-201ENST00000270061 SUB1P53999 127 aaKnown RBP eCLIP19.43■□□□□ 0.71e-6■□□□□ 8.5
SSBP4-201ENST00000270061 ZNF616Q08AN1 781 aa19.43■□□□□ 0.7
SSBP4-201ENST00000270061 TREML4Q6UXN2 200 aa19.43■□□□□ 0.7
SSBP4-201ENST00000270061 PIFOQ8TCI5 191 aa19.43■□□□□ 0.7
SSBP4-201ENST00000270061 KIAA1456Q9P272 454 aa19.43■□□□□ 0.7
SSBP4-201ENST00000270061 C17orf112F2Z3M2 114 aa19.42■□□□□ 0.7
SSBP4-201ENST00000270061 SOX15O60248 233 aa19.42■□□□□ 0.7
SSBP4-201ENST00000270061 TOR2AQ5JU69 321 aa19.42■□□□□ 0.7
SSBP4-201ENST00000270061 SRSF8Q9BRL6 282 aaKnown RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms