RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 PAPPA-AS1Q5QFB9 102 aa10.11□□□□□ -0.79
COL8A1-201ENST00000261037 FGFBP3Q8TAT2 258 aa10.11□□□□□ -0.79
COL8A1-201ENST00000261037 WBP1Q96G27 269 aa10.11□□□□□ -0.79
COL8A1-201ENST00000261037 PEMTQ9UBM1 199 aa10.11□□□□□ -0.79
COL8A1-201ENST00000261037 SCN8AQ9UQD0 1980 aa10.11□□□□□ -0.79
COL8A1-201ENST00000261037 A0A1B0GUT8 65 aa10.1□□□□□ -0.79
COL8A1-201ENST00000261037 PYYP10082 97 aa10.1□□□□□ -0.79
COL8A1-201ENST00000261037 PRR31Q5SQ13 230 aa10.1□□□□□ -0.79
COL8A1-201ENST00000261037 CYB5R2Q6BCY4 276 aa10.1□□□□□ -0.79
COL8A1-201ENST00000261037 C1QTNF9BB2RNN3 333 aa10.1□□□□□ -0.79
COL8A1-201ENST00000261037 UPK2O00526 184 aa10.1□□□□□ -0.79
COL8A1-201ENST00000261037 IGFBP3P17936 291 aaPredicted RBP10.1□□□□□ -0.79
COL8A1-201ENST00000261037 RNASEH2CQ8TDP1 164 aaKnown RBP10.1□□□□□ -0.79
COL8A1-201ENST00000261037 LCTP09848 1927 aa10.1□□□□□ -0.79
COL8A1-201ENST00000261037 THBDP07204 575 aa10.1□□□□□ -0.79
COL8A1-201ENST00000261037 HOXA5P20719 270 aa10.1□□□□□ -0.79
COL8A1-201ENST00000261037 PGPEP1Q9NXJ5 209 aa10.1□□□□□ -0.79
COL8A1-201ENST00000261037 RNASE6Q93091 150 aaKnown RBP10.1□□□□□ -0.79
COL8A1-201ENST00000261037 KNTC1P50748 2209 aa10.1□□□□□ -0.79
COL8A1-201ENST00000261037 HIGD1CA8MV81 97 aa10.1□□□□□ -0.79
COL8A1-201ENST00000261037 TMEM250H0YL14 139 aa10.1□□□□□ -0.79
COL8A1-201ENST00000261037 APOMO95445 188 aa10.1□□□□□ -0.79
COL8A1-201ENST00000261037 NUDT11Q96G61 164 aa10.1□□□□□ -0.79
COL8A1-201ENST00000261037 JKAMPQ9P055 326 aa10.1□□□□□ -0.79
COL8A1-201ENST00000261037 CKAP5Q14008 2032 aa10.09□□□□□ -0.79
COL8A1-201ENST00000261037 SRSF3P84103 164 aaKnown RBP10.09□□□□□ -0.79
COL8A1-201ENST00000261037 CFAP161Q6P656 301 aa10.09□□□□□ -0.79
COL8A1-201ENST00000261037 OR5AN1Q8NGI8 311 aa10.09□□□□□ -0.79
COL8A1-201ENST00000261037 DEFB104AQ8WTQ1 72 aa10.09□□□□□ -0.79
COL8A1-201ENST00000261037 IZUMO1RA6ND01 250 aa10.09□□□□□ -0.79
COL8A1-201ENST00000261037 OR9G9P0C7N8 305 aa10.09□□□□□ -0.79
COL8A1-201ENST00000261037 MALP21145 153 aa10.09□□□□□ -0.79
COL8A1-201ENST00000261037 EVI2AP22794 236 aa10.09□□□□□ -0.79
COL8A1-201ENST00000261037 ATP5IP56385 69 aaPredicted RBP10.09□□□□□ -0.79
COL8A1-201ENST00000261037 MORN2Q502X0 79 aa10.09□□□□□ -0.79
COL8A1-201ENST00000261037 RNF222A6NCQ9 220 aa10.09□□□□□ -0.79
COL8A1-201ENST00000261037 TBX6O95947 436 aaPredicted RBP10.09□□□□□ -0.79
COL8A1-201ENST00000261037 ZNF497Q6ZNH5 498 aa10.09□□□□□ -0.79
COL8A1-201ENST00000261037 LINC00518Q8N0U6 118 aa10.09□□□□□ -0.79
COL8A1-201ENST00000261037 BRWD1Q9NSI6 2320 aa10.09□□□□□ -0.79
COL8A1-201ENST00000261037 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.09□□□□□ -0.79
COL8A1-201ENST00000261037 CD33P20138 364 aa10.09□□□□□ -0.79
COL8A1-201ENST00000261037 ADMP35318 185 aa10.09□□□□□ -0.79
COL8A1-201ENST00000261037 FOXF2Q12947 444 aa10.09□□□□□ -0.79
COL8A1-201ENST00000261037 CRIPAKQ8N1N5 446 aa10.09□□□□□ -0.79
COL8A1-201ENST00000261037 TRBV6-7A0A0A0MS04 114 aa10.08□□□□□ -0.8
COL8A1-201ENST00000261037 PRR32B1ATL7 298 aa10.08□□□□□ -0.8
COL8A1-201ENST00000261037 H3BRM9 83 aa10.08□□□□□ -0.8
COL8A1-201ENST00000261037 TMEM50AO95807 157 aa10.08□□□□□ -0.8
COL8A1-201ENST00000261037 TYMSP04818 313 aa10.08□□□□□ -0.8
COL8A1-201ENST00000261037 TMEM133Q9H2Q1 129 aa10.08□□□□□ -0.8
COL8A1-201ENST00000261037 OTORQ9NRC9 128 aa10.08□□□□□ -0.8
COL8A1-201ENST00000261037 A0A0A6YYD4 124 aa10.08□□□□□ -0.8
COL8A1-201ENST00000261037 TRAV40A0A0B4J280 105 aa10.08□□□□□ -0.8
COL8A1-201ENST00000261037 C15orf61A6NNL5 157 aa10.08□□□□□ -0.8
COL8A1-201ENST00000261037 TMEM167AQ8TBQ9 72 aa10.08□□□□□ -0.8
COL8A1-201ENST00000261037 DMRT1Q9Y5R6 373 aa10.08□□□□□ -0.8
COL8A1-201ENST00000261037 MAP1BP46821 2468 aaKnown RBP10.08□□□□□ -0.8
COL8A1-201ENST00000261037 IGLV3-19P01714 112 aa10.08□□□□□ -0.8
COL8A1-201ENST00000261037 C1QTNF9P0C862 333 aa10.08□□□□□ -0.8
COL8A1-201ENST00000261037 PAX1P15863 534 aa10.08□□□□□ -0.8
COL8A1-201ENST00000261037 RHOGP84095 191 aa10.08□□□□□ -0.8
COL8A1-201ENST00000261037 SFTA2Q6UW10 78 aa10.08□□□□□ -0.8
COL8A1-201ENST00000261037 NR2C2APQ86WQ0 139 aa10.08□□□□□ -0.8
COL8A1-201ENST00000261037 CCDC88CQ9P219 2028 aa10.08□□□□□ -0.8
COL8A1-201ENST00000261037 UNC13CQ8NB66 2214 aa10.08□□□□□ -0.8
COL8A1-201ENST00000261037 NRN1LQ496H8 165 aa10.08□□□□□ -0.8
COL8A1-201ENST00000261037 FAM90A1Q86YD7 464 aa10.08□□□□□ -0.8
COL8A1-201ENST00000261037 IGKV1-9A0A0C4DH69 117 aa10.08□□□□□ -0.8
COL8A1-201ENST00000261037 TRBV7-9A0A0J9YWB2 115 aa10.08□□□□□ -0.8
COL8A1-201ENST00000261037 TCRBV4S1A1TA0A5B7 111 aa10.08□□□□□ -0.8
COL8A1-201ENST00000261037 TMEM42Q69YG0 159 aa10.08□□□□□ -0.8
COL8A1-201ENST00000261037 MYOFQ9NZM1 2061 aa10.07□□□□□ -0.8
COL8A1-201ENST00000261037 TRAV12-3A0A0B4J271 114 aa10.07□□□□□ -0.8
COL8A1-201ENST00000261037 OR10W1Q8NGF6 305 aa10.07□□□□□ -0.8
COL8A1-201ENST00000261037 FLVCR1-AS1Q8TAF5 88 aa10.07□□□□□ -0.8
COL8A1-201ENST00000261037 GTF3AQ92664 365 aaKnown RBP10.07□□□□□ -0.8
COL8A1-201ENST00000261037 TIMM23O14925 209 aa10.07□□□□□ -0.8
COL8A1-201ENST00000261037 C11orf68Q9H3H3 251 aaKnown RBP10.07□□□□□ -0.8
COL8A1-201ENST00000261037 CEP290O15078 2479 aa10.07□□□□□ -0.8
COL8A1-201ENST00000261037 IGHV4-39P01824 125 aa10.07□□□□□ -0.8
COL8A1-201ENST00000261037 CNTFRP26992 372 aa10.07□□□□□ -0.8
COL8A1-201ENST00000261037 KLRD1Q13241 179 aa10.07□□□□□ -0.8
COL8A1-201ENST00000261037 ZNF585BQ52M93 769 aa10.07□□□□□ -0.8
COL8A1-201ENST00000261037 SPACA3Q8IXA5 215 aa10.07□□□□□ -0.8
COL8A1-201ENST00000261037 CIARTQ8N365 385 aaPredicted RBP10.07□□□□□ -0.8
COL8A1-201ENST00000261037 NUDT10Q8NFP7 164 aa10.07□□□□□ -0.8
COL8A1-201ENST00000261037 ZNF319Q9P2F9 582 aa10.07□□□□□ -0.8
COL8A1-201ENST00000261037 PGPEP1LA6NFU8 196 aa10.07□□□□□ -0.8
COL8A1-201ENST00000261037 TTC9CQ8N5M4 171 aa10.07□□□□□ -0.8
COL8A1-201ENST00000261037 BEND2Q8NDZ0 799 aa10.07□□□□□ -0.8
COL8A1-201ENST00000261037 MRPS18CQ9Y3D5 142 aaKnown RBP10.07□□□□□ -0.8
COL8A1-201ENST00000261037 ATP5LO75964 103 aa10.06□□□□□ -0.8
COL8A1-201ENST00000261037 RPL23P62829 140 aaKnown RBP10.06□□□□□ -0.8
COL8A1-201ENST00000261037 C10orf126Q8N4M7 172 aa10.06□□□□□ -0.8
COL8A1-201ENST00000261037 RNF125Q96EQ8 232 aa10.06□□□□□ -0.8
COL8A1-201ENST00000261037 SOX21Q9Y651 276 aaPredicted RBP10.06□□□□□ -0.8
COL8A1-201ENST00000261037 ARID1AO14497 2285 aa10.06□□□□□ -0.8
COL8A1-201ENST00000261037 IGHV3-64A0A075B6Q5 118 aa10.06□□□□□ -0.8
COL8A1-201ENST00000261037 TRAV5A0A0B4J249 113 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms