RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Gm3550W4VSN7 160 aa14.37□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Gm20918J3QN17 227 aa14.37□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Edn1P22387 202 aa14.37□□□□□ -0.11
Ctcf-201ENSMUST00000005841 HrasQ61411 189 aa14.37□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Sf3a2Q62203 475 aaKnown RBP14.37□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Olfr1000Q7TR99 314 aa14.37□□□□□ -0.11
Ctcf-201ENSMUST00000005841 SetmarQ80UJ9 309 aa14.37□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Rnf170Q8CBG9 286 aa14.37□□□□□ -0.11
Ctcf-201ENSMUST00000005841 RfxapQ8VCG9 231 aa14.37□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Mrps28Q9CY16 186 aa14.37□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Nudt22Q9DD16 308 aa14.37□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Muc5acE9QAQ8 3455 aa14.37□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Olfr1326-ps1A0A140T8J7 311 aa14.37□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Gm45844A0A1B0GRQ2 137 aa14.37□□□□□ -0.11
Ctcf-201ENSMUST00000005841 E430018J23RikE9PZQ8 461 aa14.37□□□□□ -0.11
Ctcf-201ENSMUST00000005841 H2-DMb2Q31099 261 aa14.37□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Smim37Q8BT35 56 aa14.37□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Entpd8Q8K0L2 497 aa14.37□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Tmem41bQ8K1A5 291 aa14.37□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Thyn1Q91YJ3 226 aa14.37□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Abhd12Q99LR1 398 aaKnown RBP14.37□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Gng10Q9CXP8 68 aa14.37□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Olfr609E9Q4X7 319 aa14.36□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Ifna6P07350 189 aa14.36□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Gm21943Q5FWD5 227 aa14.36□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Sat2Q6P8J2 170 aa14.36□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Gm5447Q8BPB2 115 aa14.36□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Tubg2Q8VCK3 451 aa14.36□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Olfr1440Q8VFV4 315 aa14.36□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Olfr1444Q8VFX2 319 aa14.36□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Olfr1413Q8VGU3 323 aa14.36□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Tex43Q9D9I1 141 aa14.36□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Slc37a2Q9WU81 501 aa14.36□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Atoh7Q9Z2E5 149 aa14.36□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Col4a4Q9QZR9 1682 aa14.36□□□□□ -0.11
Ctcf-201ENSMUST00000005841 PgfP49764 158 aa14.36□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Zfp36l3Q5ISE2 725 aa14.36□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Olfr351Q8VGK1 310 aa14.36□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Col27a1Q5QNQ9 1845 aa14.36□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Trbv12-2A0A0B4J1H1 124 aa14.36□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Ucp1P12242 307 aa14.36□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Tmem70Q921N7 253 aa14.36□□□□□ -0.11
Ctcf-201ENSMUST00000005841 FetubQ9QXC1 388 aa14.36□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Ighv1-34A0A075B5V2 117 aa14.35□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Pwwp2bE9Q9M8 600 aa14.35□□□□□ -0.11
Ctcf-201ENSMUST00000005841 PmchP56942 165 aa14.35□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Rtl6Q505G4 243 aa14.35□□□□□ -0.11
Ctcf-201ENSMUST00000005841 H2-M10.3Q85ZW6 330 aa14.35□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Nadk2Q8C5H8 452 aa14.35□□□□□ -0.11
Ctcf-201ENSMUST00000005841 RydenQ8CAK3 290 aaKnown RBP14.35□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Scgb1b27Q91WB5 92 aa14.35□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Gm13083A2AGW5 501 aa14.35□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Gm4787B2RUD9 748 aa14.35□□□□□ -0.11
Ctcf-201ENSMUST00000005841 6030452D12RikQ8CD33 222 aa14.35□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Wipi1Q8R3E3 446 aa14.35□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Pira2F8VQ94 680 aa14.35□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Il9rQ01114 468 aa14.35□□□□□ -0.11
Ctcf-201ENSMUST00000005841 SryQ05738 395 aa14.35□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Zfp72Q0VFY0 435 aa14.35□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Prdm6Q3UZD5 596 aa14.35□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Svs6Q64356 99 aa14.35□□□□□ -0.11
Ctcf-201ENSMUST00000005841 9130023H24RikQ8BG98 337 aa14.35□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Gm21834J3QN05 151 aa14.34□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Fpr2O88536 351 aa14.34□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Fut9O88819 359 aa14.34□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Trdv4Q5R1A3 115 aa14.34□□□□□ -0.11
Ctcf-201ENSMUST00000005841 HykkQ5U5V2 376 aa14.34□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Orm3Q63805 206 aa14.34□□□□□ -0.11
Ctcf-201ENSMUST00000005841 PigtQ8BXQ2 582 aa14.34□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Slc37a1Q8R070 531 aa14.34□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Vmn1r225Q8R2A5 298 aa14.34□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Rab7bQ8VEA8 199 aa14.34□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Olfr536Q8VFE9 307 aa14.34□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Rab40cQ8VHQ4 281 aa14.34□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Tmem239Q9DA47 151 aa14.34□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Iglc2P01844 104 aa14.34□□□□□ -0.11
Ctcf-201ENSMUST00000005841 SelenotP62342 195 aa14.34□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Slc25a31Q3V132 320 aa14.34□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Ifna15Q61718 190 aa14.34□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Gpr84Q8CIM5 396 aa14.34□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Tm4sf19E9Q9H8 206 aa14.34□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Htr5aP30966 357 aa14.34□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Gm5615Q3UW02 101 aa14.34□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Pth2Q91W27 100 aa14.34□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Nkg7Q99PA5 165 aa14.34□□□□□ -0.11
Ctcf-201ENSMUST00000005841 MmachcQ9CZD0 279 aa14.34□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Mrpl30Q9D7N6 160 aa14.34□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Reg4Q9D8G5 157 aa14.34□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Dda1Q9D9Z5 102 aa14.34□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Kcnk5Q9JK62 502 aa14.34□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Trav4-2A0A075B638 110 aa14.33□□□□□ -0.11
Ctcf-201ENSMUST00000005841 PpyP10601 100 aa14.33□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Hsf1P38532 525 aa14.33□□□□□ -0.11
Ctcf-201ENSMUST00000005841 StomP54116 284 aa14.33□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Mib2Q8R516 973 aa14.33□□□□□ -0.11
Ctcf-201ENSMUST00000005841 UmodQ91X17 642 aa14.33□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Gje1Q9CX92 205 aa14.33□□□□□ -0.11
Ctcf-201ENSMUST00000005841 CsQ9CZU6 464 aaKnown RBP14.33□□□□□ -0.11
Ctcf-201ENSMUST00000005841 GrinaQ9ESF4 345 aa14.33□□□□□ -0.11
Ctcf-201ENSMUST00000005841 Prr12E9PYL2 2035 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 32.8 ms