RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 SPNP16150 400 aa5.28□□□□□ -1.56
UPF3B-205ENST00000636792 CTRB1P17538 263 aa5.28□□□□□ -1.56
UPF3B-205ENST00000636792 PVALBP20472 110 aaPredicted RBP5.28□□□□□ -1.56
UPF3B-205ENST00000636792 PPIFP30405 207 aaKnown RBP5.28□□□□□ -1.56
UPF3B-205ENST00000636792 HTR2BP41595 481 aa5.28□□□□□ -1.56
UPF3B-205ENST00000636792 NKX2-1P43699 371 aaPredicted RBP5.28□□□□□ -1.56
UPF3B-205ENST00000636792 HOXA1P49639 335 aaPredicted RBP5.28□□□□□ -1.56
UPF3B-205ENST00000636792 SUB1P53999 127 aaKnown RBP eCLIP5.28□□□□□ -1.569e-7■■■□□ 17.7
UPF3B-205ENST00000636792 BLCAPP62952 87 aa5.28□□□□□ -1.56
UPF3B-205ENST00000636792 SSBP2P81877 361 aaPredicted RBP5.28□□□□□ -1.56
UPF3B-205ENST00000636792 ERHP84090 104 aaKnown RBP5.28□□□□□ -1.56
UPF3B-205ENST00000636792 NDPQ00604 133 aa5.28□□□□□ -1.56
UPF3B-205ENST00000636792 CFHR3Q02985 330 aa5.28□□□□□ -1.56
UPF3B-205ENST00000636792 FOXE3Q13461 319 aa5.28□□□□□ -1.56
UPF3B-205ENST00000636792 BSXQ3C1V8 233 aa5.28□□□□□ -1.56
UPF3B-205ENST00000636792 CTRB2Q6GPI1 263 aa5.28□□□□□ -1.56
UPF3B-205ENST00000636792 TEX38Q6PEX7 206 aa5.28□□□□□ -1.56
UPF3B-205ENST00000636792 Q6ZNX1 250 aa5.28□□□□□ -1.56
UPF3B-205ENST00000636792 FAM223AQ8IWN6 122 aa5.28□□□□□ -1.56
UPF3B-205ENST00000636792 RNF152Q8N8N0 203 aa5.28□□□□□ -1.56
UPF3B-205ENST00000636792 OR4X2Q8NGF9 303 aa5.28□□□□□ -1.56
UPF3B-205ENST00000636792 OR1P1Q8NH06 330 aa5.28□□□□□ -1.56
UPF3B-205ENST00000636792 LINC01006Q8NI28 216 aa5.28□□□□□ -1.56
UPF3B-205ENST00000636792 WIPF2Q8TF74 440 aaPredicted RBP5.28□□□□□ -1.56
UPF3B-205ENST00000636792 ABHD5Q8WTS1 349 aa5.28□□□□□ -1.56
UPF3B-205ENST00000636792 RAB40CQ96S21 281 aa5.28□□□□□ -1.56
UPF3B-205ENST00000636792 KRTAP9-8Q9BYQ0 159 aa5.28□□□□□ -1.56
UPF3B-205ENST00000636792 MED28Q9H204 178 aa5.28□□□□□ -1.56
UPF3B-205ENST00000636792 HIPK2Q9H2X6 1198 aa5.28□□□□□ -1.56
UPF3B-205ENST00000636792 PARP11Q9NR21 331 aa5.28□□□□□ -1.56
UPF3B-205ENST00000636792 SERTAD4Q9NUC0 356 aa5.28□□□□□ -1.56
UPF3B-205ENST00000636792 WSB1Q9Y6I7 421 aa5.28□□□□□ -1.56
UPF3B-205ENST00000636792 U3KQ87 197 aa5.28□□□□□ -1.56
UPF3B-205ENST00000636792 SVEP1Q4LDE5 3571 aa5.27□□□□□ -1.57
UPF3B-205ENST00000636792 A0A0G2JLM5 398 aa5.27□□□□□ -1.57
UPF3B-205ENST00000636792 TEX50A0A1B0GTY4 177 aa5.27□□□□□ -1.57
UPF3B-205ENST00000636792 C5orf51A6NDU8 294 aa5.27□□□□□ -1.57
UPF3B-205ENST00000636792 WRBO00258 174 aa5.27□□□□□ -1.57
UPF3B-205ENST00000636792 GOSR2O14653 212 aa5.27□□□□□ -1.57
UPF3B-205ENST00000636792 SYNGR2O43760 224 aa5.27□□□□□ -1.57
UPF3B-205ENST00000636792 TSC22D2O75157 780 aa5.27□□□□□ -1.57
UPF3B-205ENST00000636792 FBXO24O75426 580 aa5.27□□□□□ -1.57
UPF3B-205ENST00000636792 SCGB2A1O75556 95 aa5.27□□□□□ -1.57
UPF3B-205ENST00000636792 OPN1MWP04001 364 aa5.27□□□□□ -1.57
UPF3B-205ENST00000636792 RLN2P04090 185 aa5.27□□□□□ -1.57
UPF3B-205ENST00000636792 OPN1MW2P0DN77 364 aa5.27□□□□□ -1.57
UPF3B-205ENST00000636792 OPN1MW3P0DN78 364 aa5.27□□□□□ -1.57
UPF3B-205ENST00000636792 PSMB8P28062 276 aa5.27□□□□□ -1.57
UPF3B-205ENST00000636792 PSMB6P28072 239 aa5.27□□□□□ -1.57
UPF3B-205ENST00000636792 SNCAP37840 140 aa5.27□□□□□ -1.57
UPF3B-205ENST00000636792 PROK1P58294 105 aa5.27□□□□□ -1.57
UPF3B-205ENST00000636792 RAP2BP61225 183 aa5.27□□□□□ -1.57
UPF3B-205ENST00000636792 GNB1P62873 340 aa5.27□□□□□ -1.57
UPF3B-205ENST00000636792 PJVKQ0ZLH3 352 aa5.27□□□□□ -1.57
UPF3B-205ENST00000636792 IL15RAQ13261 267 aa5.27□□□□□ -1.57
UPF3B-205ENST00000636792 EXOSC2Q13868 293 aaKnown RBP5.27□□□□□ -1.57
UPF3B-205ENST00000636792 C9orf152Q5JTZ5 239 aa5.27□□□□□ -1.57
UPF3B-205ENST00000636792 UNQ5815/PRO19632Q6UWF5 114 aa5.27□□□□□ -1.57
UPF3B-205ENST00000636792 Q6ZRM9 215 aa5.27□□□□□ -1.57
UPF3B-205ENST00000636792 PRIMA1Q86XR5 153 aa5.27□□□□□ -1.57
UPF3B-205ENST00000636792 OR2C3Q8N628 320 aa5.27□□□□□ -1.57
UPF3B-205ENST00000636792 GRPEL2Q8TAA5 225 aa5.27□□□□□ -1.57
UPF3B-205ENST00000636792 MYOZ3Q8TDC0 251 aa5.27□□□□□ -1.57
UPF3B-205ENST00000636792 DTD1Q8TEA8 209 aa5.27□□□□□ -1.57
UPF3B-205ENST00000636792 USMG5Q96IX5 58 aa5.27□□□□□ -1.57
UPF3B-205ENST00000636792 DUX5Q96PT3 197 aa5.27□□□□□ -1.57
UPF3B-205ENST00000636792 TNFRSF19Q9NS68 423 aa5.27□□□□□ -1.57
UPF3B-205ENST00000636792 GAR1Q9NY12 217 aaKnown RBP5.27□□□□□ -1.57
UPF3B-205ENST00000636792 MGAT4CQ9UBM8 478 aa5.27□□□□□ -1.57
UPF3B-205ENST00000636792 F11RQ9Y624 299 aaKnown RBP5.27□□□□□ -1.57
UPF3B-205ENST00000636792 TEP1Q99973 2627 aaKnown RBP5.26□□□□□ -1.57
UPF3B-205ENST00000636792 TRBV9A0A0B4J1U6 114 aa5.26□□□□□ -1.57
UPF3B-205ENST00000636792 TRAV3A0A0B4J244 114 aa5.26□□□□□ -1.57
UPF3B-205ENST00000636792 RPS10-NUDT3A0A1W2PQS6 291 aa5.26□□□□□ -1.57
UPF3B-205ENST00000636792 MSGN1A6NI15 193 aa5.26□□□□□ -1.57
UPF3B-205ENST00000636792 CGB1A6NKQ9 187 aa5.26□□□□□ -1.57
UPF3B-205ENST00000636792 CEBPZOSA8MTT3 80 aa5.26□□□□□ -1.57
UPF3B-205ENST00000636792 FNDC10F2Z333 226 aa5.26□□□□□ -1.57
UPF3B-205ENST00000636792 FCN1O00602 326 aa5.26□□□□□ -1.57
UPF3B-205ENST00000636792 EGR2P11161 476 aaPredicted RBP5.26□□□□□ -1.57
UPF3B-205ENST00000636792 NPY1RP25929 384 aa5.26□□□□□ -1.57
UPF3B-205ENST00000636792 KRTAP10-2P60368 255 aa5.26□□□□□ -1.57
UPF3B-205ENST00000636792 RAB11AP62491 216 aa5.26□□□□□ -1.57
UPF3B-205ENST00000636792 ECSCRQ19T08 205 aa5.26□□□□□ -1.57
UPF3B-205ENST00000636792 KRTAP24-1Q3LI83 254 aa5.26□□□□□ -1.57
UPF3B-205ENST00000636792 C2orf83Q53S99 150 aa5.26□□□□□ -1.57
UPF3B-205ENST00000636792 CXorf66Q5JRM2 361 aaPredicted RBP5.26□□□□□ -1.57
UPF3B-205ENST00000636792 ASPHD1Q5U4P2 390 aa5.26□□□□□ -1.57
UPF3B-205ENST00000636792 PVRIGQ6DKI7 326 aa5.26□□□□□ -1.57
UPF3B-205ENST00000636792 ETFRF1Q6IPR1 90 aa5.26□□□□□ -1.57
UPF3B-205ENST00000636792 TMEM65Q6PI78 240 aa5.26□□□□□ -1.57
UPF3B-205ENST00000636792 KLHDC1Q8N7A1 406 aa5.26□□□□□ -1.57
UPF3B-205ENST00000636792 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.26□□□□□ -1.57
UPF3B-205ENST00000636792 UXS1Q8NBZ7 420 aa5.26□□□□□ -1.57
UPF3B-205ENST00000636792 NECAP1Q8NC96 275 aa5.26□□□□□ -1.57
UPF3B-205ENST00000636792 LFNGQ8NES3 379 aa5.26□□□□□ -1.57
UPF3B-205ENST00000636792 SLC24A4Q8NFF2 622 aa5.26□□□□□ -1.57
UPF3B-205ENST00000636792 RNASEH2CQ8TDP1 164 aaKnown RBP5.26□□□□□ -1.57
UPF3B-205ENST00000636792 OR10C1Q96KK4 312 aa5.26□□□□□ -1.57
UPF3B-205ENST00000636792 CXorf58Q96LI9 332 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms