RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 FAM90A18PA6NE21 464 aa11.12□□□□□ -0.63
PCDHA11-202ENST00000616325 FAM90A16PA6NEW6 464 aa11.12□□□□□ -0.63
PCDHA11-202ENST00000616325 FAM90A20PA6NIJ5 464 aa11.12□□□□□ -0.63
PCDHA11-202ENST00000616325 FAM90A8PA6NJQ4 464 aa11.12□□□□□ -0.63
PCDHA11-202ENST00000616325 FAM90A7PA6NKC0 464 aa11.12□□□□□ -0.63
PCDHA11-202ENST00000616325 PMS2P5A8MQ11 134 aa11.12□□□□□ -0.63
PCDHA11-202ENST00000616325 FAM90A22PA8MWA6 464 aa11.12□□□□□ -0.63
PCDHA11-202ENST00000616325 FAM90A12PA8MX19 464 aa11.12□□□□□ -0.63
PCDHA11-202ENST00000616325 FAM90A5PA8MXJ8 464 aa11.12□□□□□ -0.63
PCDHA11-202ENST00000616325 FAM90A23PA8MXZ1 464 aa11.12□□□□□ -0.63
PCDHA11-202ENST00000616325 TMEM238C9JI98 176 aa11.12□□□□□ -0.63
PCDHA11-202ENST00000616325 FAM90A26D6RGX4 464 aa11.12□□□□□ -0.63
PCDHA11-202ENST00000616325 M0R1X1 148 aa11.12□□□□□ -0.63
PCDHA11-202ENST00000616325 DNPH1O43598 174 aa11.12□□□□□ -0.63
PCDHA11-202ENST00000616325 FAM90A15PP0C7V4 464 aa11.12□□□□□ -0.63
PCDHA11-202ENST00000616325 FAM90A13PP0C7W8 464 aa11.12□□□□□ -0.63
PCDHA11-202ENST00000616325 FAM90A14PP0C7W9 464 aa11.12□□□□□ -0.63
PCDHA11-202ENST00000616325 FAM90A24PP0C7X0 464 aa11.12□□□□□ -0.63
PCDHA11-202ENST00000616325 CLDN18P56856 261 aa11.12□□□□□ -0.63
PCDHA11-202ENST00000616325 IBA57Q5T440 356 aaKnown RBP11.12□□□□□ -0.63
PCDHA11-202ENST00000616325 C1orf185Q5T7R7 199 aa11.12□□□□□ -0.63
PCDHA11-202ENST00000616325 NEUROG1Q92886 237 aa11.12□□□□□ -0.63
PCDHA11-202ENST00000616325 LINC00479Q96M42 142 aa11.12□□□□□ -0.63
PCDHA11-202ENST00000616325 MRPS16Q9Y3D3 137 aaKnown RBP11.12□□□□□ -0.63
PCDHA11-202ENST00000616325 ADGRG4Q8IZF6 3080 aa11.11□□□□□ -0.63
PCDHA11-202ENST00000616325 A0A087X0K7 114 aa11.11□□□□□ -0.63
PCDHA11-202ENST00000616325 IGHV2-26A0A0B4J1V2 119 aa11.11□□□□□ -0.63
PCDHA11-202ENST00000616325 OR4C46A6NHA9 309 aa11.11□□□□□ -0.63
PCDHA11-202ENST00000616325 C15orf62A8K5M9 175 aa11.11□□□□□ -0.63
PCDHA11-202ENST00000616325 NPY1RP25929 384 aa11.11□□□□□ -0.63
PCDHA11-202ENST00000616325 UBE2G1P62253 170 aa11.11□□□□□ -0.63
PCDHA11-202ENST00000616325 TREML4Q6UXN2 200 aa11.11□□□□□ -0.63
PCDHA11-202ENST00000616325 Q8NFD4 153 aa11.11□□□□□ -0.63
PCDHA11-202ENST00000616325 AP1S3Q96PC3 154 aa11.11□□□□□ -0.63
PCDHA11-202ENST00000616325 FAM173AQ9BQD7 235 aa11.11□□□□□ -0.63
PCDHA11-202ENST00000616325 SFXN3Q9BWM7 321 aa11.11□□□□□ -0.63
PCDHA11-202ENST00000616325 CSTL1Q9H114 145 aa11.11□□□□□ -0.63
PCDHA11-202ENST00000616325 WDR83OSQ9Y284 106 aa11.11□□□□□ -0.63
PCDHA11-202ENST00000616325 YLPM1P49750 1951 aaKnown RBP11.11□□□□□ -0.63
PCDHA11-202ENST00000616325 OR5B21A6NL26 309 aa11.11□□□□□ -0.63
PCDHA11-202ENST00000616325 TOX4O94842 621 aa11.11□□□□□ -0.63
PCDHA11-202ENST00000616325 MT-CO2P00403 227 aa11.11□□□□□ -0.63
PCDHA11-202ENST00000616325 ESDP10768 282 aa11.11□□□□□ -0.63
PCDHA11-202ENST00000616325 TBC1D28Q2M2D7 210 aa11.11□□□□□ -0.63
PCDHA11-202ENST00000616325 FAM168AQ92567 244 aa11.11□□□□□ -0.63
PCDHA11-202ENST00000616325 HSBP1L1C9JCN9 74 aa11.1□□□□□ -0.63
PCDHA11-202ENST00000616325 STAG3L2P0CL84 134 aa11.1□□□□□ -0.63
PCDHA11-202ENST00000616325 STAG3L3P0CL85 134 aa11.1□□□□□ -0.63
PCDHA11-202ENST00000616325 C19orf35Q6ZS72 473 aa11.1□□□□□ -0.63
PCDHA11-202ENST00000616325 MIR17HGQ75NE6 70 aa11.1□□□□□ -0.63
PCDHA11-202ENST00000616325 SSX8Q7RTT4 187 aa11.1□□□□□ -0.63
PCDHA11-202ENST00000616325 MGST2Q99735 147 aa11.1□□□□□ -0.63
PCDHA11-202ENST00000616325 GSX1Q9H4S2 264 aaPredicted RBP11.1□□□□□ -0.63
PCDHA11-202ENST00000616325 LAMTOR5O43504 91 aa11.1□□□□□ -0.63
PCDHA11-202ENST00000616325 TIMM8AO60220 97 aaPredicted RBP11.1□□□□□ -0.63
PCDHA11-202ENST00000616325 MEOX1P50221 254 aa11.1□□□□□ -0.63
PCDHA11-202ENST00000616325 PPOXP50336 477 aa11.1□□□□□ -0.63
PCDHA11-202ENST00000616325 FNDC4Q9H6D8 234 aaPredicted RBP11.1□□□□□ -0.63
PCDHA11-202ENST00000616325 MPC1Q9Y5U8 109 aa11.1□□□□□ -0.63
PCDHA11-202ENST00000616325 IGHV3OR15-7A0A075B7D8 119 aa11.1□□□□□ -0.63
PCDHA11-202ENST00000616325 FAM181BA6NEQ2 426 aa11.1□□□□□ -0.63
PCDHA11-202ENST00000616325 LINC00473A8K010 186 aa11.1□□□□□ -0.63
PCDHA11-202ENST00000616325 MPV17P39210 176 aa11.1□□□□□ -0.63
PCDHA11-202ENST00000616325 CX3CL1P78423 397 aa11.1□□□□□ -0.63
PCDHA11-202ENST00000616325 Q6P435 159 aa11.1□□□□□ -0.63
PCDHA11-202ENST00000616325 DYSFO75923 2080 aa11.09□□□□□ -0.63
PCDHA11-202ENST00000616325 AMY1AP04745 511 aa11.09□□□□□ -0.63
PCDHA11-202ENST00000616325 CSN3P07498 182 aa11.09□□□□□ -0.63
PCDHA11-202ENST00000616325 OR9G9P0C7N8 305 aa11.09□□□□□ -0.63
PCDHA11-202ENST00000616325 C18orf32Q8TCD1 76 aa11.09□□□□□ -0.63
PCDHA11-202ENST00000616325 POLDIP2Q9Y2S7 368 aa11.09□□□□□ -0.63
PCDHA11-202ENST00000616325 PPIAL4DF5H284 164 aa11.09□□□□□ -0.63
PCDHA11-202ENST00000616325 MT-ND6P03923 174 aa11.09□□□□□ -0.63
PCDHA11-202ENST00000616325 RHOBP62745 196 aa11.09□□□□□ -0.63
PCDHA11-202ENST00000616325 PSG9Q00887 426 aa11.09□□□□□ -0.63
PCDHA11-202ENST00000616325 EFNB3Q15768 340 aa11.09□□□□□ -0.63
PCDHA11-202ENST00000616325 OR10J3Q5JRS4 329 aa11.09□□□□□ -0.63
PCDHA11-202ENST00000616325 CHRDL1Q9BU40 450 aa11.09□□□□□ -0.63
PCDHA11-202ENST00000616325 GGTLC1Q9BX51 225 aa11.09□□□□□ -0.63
PCDHA11-202ENST00000616325 ZNF430Q9H8G1 570 aaPredicted RBP11.09□□□□□ -0.63
PCDHA11-202ENST00000616325 INTS1Q8N201 2190 aaKnown RBP11.09□□□□□ -0.63
PCDHA11-202ENST00000616325 DMXL1Q9Y485 3027 aa11.09□□□□□ -0.63
PCDHA11-202ENST00000616325 ZNF497Q6ZNH5 498 aa11.09□□□□□ -0.63
PCDHA11-202ENST00000616325 OR8B3Q8NGG8 313 aa11.09□□□□□ -0.63
PCDHA11-202ENST00000616325 NANOS1Q8WY41 292 aaKnown RBP11.09□□□□□ -0.63
PCDHA11-202ENST00000616325 ABI3Q9P2A4 366 aa11.09□□□□□ -0.63
PCDHA11-202ENST00000616325 PLXNB1O43157 2135 aa11.09□□□□□ -0.63
PCDHA11-202ENST00000616325 HLA-DQA1P01909 254 aa11.08□□□□□ -0.64
PCDHA11-202ENST00000616325 MYOD1P15172 320 aa11.08□□□□□ -0.64
PCDHA11-202ENST00000616325 ZNF137PP52743 207 aa11.08□□□□□ -0.64
PCDHA11-202ENST00000616325 RPL39P5Q59GN2 51 aa11.08□□□□□ -0.64
PCDHA11-202ENST00000616325 LINC00173Q6ZV60 143 aa11.08□□□□□ -0.64
PCDHA11-202ENST00000616325 ZNF645Q8N7E2 425 aa11.08□□□□□ -0.64
PCDHA11-202ENST00000616325 DEFB108BQ8NET1 73 aa11.08□□□□□ -0.64
PCDHA11-202ENST00000616325 OR13A1Q8NGR1 328 aa11.08□□□□□ -0.64
PCDHA11-202ENST00000616325 C5orf30Q96GV9 206 aa11.08□□□□□ -0.64
PCDHA11-202ENST00000616325 ADAMTS20P59510 1910 aa11.08□□□□□ -0.64
PCDHA11-202ENST00000616325 TMEM30CPA0ZSE6 113 aa11.08□□□□□ -0.64
PCDHA11-202ENST00000616325 HOXC12P31275 282 aa11.08□□□□□ -0.64
PCDHA11-202ENST00000616325 KRTAP27-1Q3LI81 207 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms