RNA–Protein interactions for RNA: ENST00000579986.6

RTTN-204, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,079 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-204ENST00000579986 SOX15O60248 233 aa5.05□□□□□ -1.6
RTTN-204ENST00000579986 TSPAN9O75954 239 aa5.05□□□□□ -1.6
RTTN-204ENST00000579986 CST7O76096 145 aa5.05□□□□□ -1.6
RTTN-204ENST00000579986 TGFAP01135 160 aa5.05□□□□□ -1.6
RTTN-204ENST00000579986 NMBP08949 121 aa5.05□□□□□ -1.6
RTTN-204ENST00000579986 TMEM11P17152 192 aa5.05□□□□□ -1.6
RTTN-204ENST00000579986 CTRB1P17538 263 aa5.05□□□□□ -1.6
RTTN-204ENST00000579986 NPY1RP25929 384 aa5.05□□□□□ -1.6
RTTN-204ENST00000579986 IER3P46695 156 aa5.05□□□□□ -1.6
RTTN-204ENST00000579986 RPL27AP46776 148 aaKnown RBP5.05□□□□□ -1.6
RTTN-204ENST00000579986 HOXA1P49639 335 aaPredicted RBP5.05□□□□□ -1.6
RTTN-204ENST00000579986 SLC38A11Q08AI6 406 aa5.05□□□□□ -1.6
RTTN-204ENST00000579986 CTRB2Q6GPI1 263 aa5.05□□□□□ -1.6
RTTN-204ENST00000579986 MRPL41Q8IXM3 137 aaKnown RBP5.05□□□□□ -1.6
RTTN-204ENST00000579986 PDZD9Q8IXQ8 264 aa5.05□□□□□ -1.6
RTTN-204ENST00000579986 SRSF12Q8WXF0 261 aaKnown RBP5.05□□□□□ -1.6
RTTN-204ENST00000579986 P2RX4Q99571 388 aa5.05□□□□□ -1.6
RTTN-204ENST00000579986 ZNF471Q9BX82 626 aaPredicted RBP5.05□□□□□ -1.6
RTTN-204ENST00000579986 F11RQ9Y624 299 aaKnown RBP5.05□□□□□ -1.6
RTTN-204ENST00000579986 SVEP1Q4LDE5 3571 aa5.05□□□□□ -1.6
RTTN-204ENST00000579986 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.05□□□□□ -1.61e-5■■■■□ 21.5
RTTN-204ENST00000579986 MPDU1O75352 247 aa5.05□□□□□ -1.6
RTTN-204ENST00000579986 FBXO24O75426 580 aa5.05□□□□□ -1.6
RTTN-204ENST00000579986 IGF1P05019 195 aa5.05□□□□□ -1.6
RTTN-204ENST00000579986 FBP1P09467 338 aa5.05□□□□□ -1.6
RTTN-204ENST00000579986 RAB5CP51148 216 aa5.05□□□□□ -1.6
RTTN-204ENST00000579986 RAB11AP62491 216 aa5.05□□□□□ -1.6
RTTN-204ENST00000579986 MMDQ15546 238 aa5.05□□□□□ -1.6
RTTN-204ENST00000579986 NDUFA5Q16718 116 aa5.05□□□□□ -1.6
RTTN-204ENST00000579986 ARSJQ5FYB0 599 aaPredicted RBP5.05□□□□□ -1.6
RTTN-204ENST00000579986 OR10P1Q8NGE3 313 aa5.05□□□□□ -1.6
RTTN-204ENST00000579986 NANPQ8TBE9 248 aa5.05□□□□□ -1.6
RTTN-204ENST00000579986 SUN5Q8TC36 379 aa5.05□□□□□ -1.6
RTTN-204ENST00000579986 GNPNAT1Q96EK6 184 aaPredicted RBP5.05□□□□□ -1.6
RTTN-204ENST00000579986 SAT2Q96F10 170 aaPredicted RBP5.05□□□□□ -1.6
RTTN-204ENST00000579986 ZNF48Q96MX3 618 aaPredicted RBP5.05□□□□□ -1.6
RTTN-204ENST00000579986 MOB4Q9Y3A3 225 aa5.05□□□□□ -1.6
RTTN-204ENST00000579986 PTPN13Q12923 2485 aa5.04□□□□□ -1.6
RTTN-204ENST00000579986 H3BP45 60 aa5.04□□□□□ -1.6
RTTN-204ENST00000579986 M0QZK8 103 aa5.04□□□□□ -1.6
RTTN-204ENST00000579986 FCGR2BP31994 310 aaPredicted RBP5.04□□□□□ -1.6
RTTN-204ENST00000579986 NDPQ00604 133 aa5.04□□□□□ -1.6
RTTN-204ENST00000579986 CD69Q07108 199 aa5.04□□□□□ -1.6
RTTN-204ENST00000579986 SPINK9Q5DT21 86 aa5.04□□□□□ -1.6
RTTN-204ENST00000579986 C10orf55Q5SWW7 151 aa5.04□□□□□ -1.6
RTTN-204ENST00000579986 TREML4Q6UXN2 200 aa5.04□□□□□ -1.6
RTTN-204ENST00000579986 BRD3OSQ6XYD6 125 aa5.04□□□□□ -1.6
RTTN-204ENST00000579986 SPNS3Q6ZMD2 512 aa5.04□□□□□ -1.6
RTTN-204ENST00000579986 EIF4E3Q8N5X7 224 aaKnown RBP5.04□□□□□ -1.6
RTTN-204ENST00000579986 TMEM86BQ8N661 226 aa5.04□□□□□ -1.6
RTTN-204ENST00000579986 THAP8Q8NA92 274 aa5.04□□□□□ -1.6
RTTN-204ENST00000579986 OR1L6Q8NGR2 347 aa5.04□□□□□ -1.6
RTTN-204ENST00000579986 SGMS2Q8NHU3 365 aa5.04□□□□□ -1.6
RTTN-204ENST00000579986 CLCC1Q96S66 551 aa5.04□□□□□ -1.6
RTTN-204ENST00000579986 HEYLQ9NQ87 328 aaPredicted RBP5.04□□□□□ -1.6
RTTN-204ENST00000579986 KIAA1456Q9P272 454 aa5.04□□□□□ -1.6
RTTN-204ENST00000579986 SOX21Q9Y651 276 aaPredicted RBP5.04□□□□□ -1.6
RTTN-204ENST00000579986 TRIM77I1YAP6 450 aa5.04□□□□□ -1.6
RTTN-204ENST00000579986 I3L2K1 104 aa5.04□□□□□ -1.6
RTTN-204ENST00000579986 PAX6P26367 422 aa5.04□□□□□ -1.6
RTTN-204ENST00000579986 ATP6V0CP27449 155 aa5.04□□□□□ -1.6
RTTN-204ENST00000579986 CX3CL1P78423 397 aa5.04□□□□□ -1.6
RTTN-204ENST00000579986 ERHP84090 104 aaKnown RBP5.04□□□□□ -1.6
RTTN-204ENST00000579986 SERF2P84101 59 aa5.04□□□□□ -1.6
RTTN-204ENST00000579986 EIF5AL1Q6IS14 154 aaKnown RBP5.04□□□□□ -1.6
RTTN-204ENST00000579986 ETV3LQ6ZN32 361 aa5.04□□□□□ -1.6
RTTN-204ENST00000579986 Q8N2B8 174 aa5.04□□□□□ -1.6
RTTN-204ENST00000579986 TAF15Q92804 592 aaKnown RBP eCLIP5.04□□□□□ -1.6
RTTN-204ENST00000579986 FBXO7Q9Y3I1 522 aa5.04□□□□□ -1.6
RTTN-204ENST00000579986 OTOGQ6ZRI0 2925 aa5.04□□□□□ -1.6
RTTN-204ENST00000579986 CELSR1Q9NYQ6 3014 aa5.04□□□□□ -1.6
RTTN-204ENST00000579986 IGLV11-55A0A075B6I3 123 aa5.03□□□□□ -1.6
RTTN-204ENST00000579986 UMAD1C9J7I0 102 aa5.03□□□□□ -1.6
RTTN-204ENST00000579986 CORTO00230 105 aa5.03□□□□□ -1.6
RTTN-204ENST00000579986 AREGP15514 252 aa5.03□□□□□ -1.6
RTTN-204ENST00000579986 CFHR3Q02985 330 aa5.03□□□□□ -1.6
RTTN-204ENST00000579986 PMS2P11Q13670 270 aa5.03□□□□□ -1.6
RTTN-204ENST00000579986 ALKAL2Q6UX46 152 aa5.03□□□□□ -1.6
RTTN-204ENST00000579986 MAPK1IP1LQ8NDC0 245 aa5.03□□□□□ -1.6
RTTN-204ENST00000579986 OR5R1Q8NH85 324 aa5.03□□□□□ -1.6
RTTN-204ENST00000579986 ARPC1AQ92747 370 aa5.03□□□□□ -1.6
RTTN-204ENST00000579986 SSX3Q99909 188 aa5.03□□□□□ -1.6
RTTN-204ENST00000579986 HSPB9Q9BQS6 159 aa5.03□□□□□ -1.6
RTTN-204ENST00000579986 ENY2Q9NPA8 101 aa5.03□□□□□ -1.6
RTTN-204ENST00000579986 PARP11Q9NR21 331 aa5.03□□□□□ -1.6
RTTN-204ENST00000579986 UQCC1Q9NVA1 299 aa5.03□□□□□ -1.6
RTTN-204ENST00000579986 DOPEY2Q9Y3R5 2298 aa5.03□□□□□ -1.6
RTTN-204ENST00000579986 ITPR3Q14573 2671 aa5.03□□□□□ -1.6
RTTN-204ENST00000579986 TRBV9A0A0B4J1U6 114 aa5.03□□□□□ -1.6
RTTN-204ENST00000579986 TRAV1-1A0A0B4J248 108 aa5.03□□□□□ -1.6
RTTN-204ENST00000579986 RBMXL2O75526 392 aaKnown RBP5.03□□□□□ -1.6
RTTN-204ENST00000579986 IGHG2P01859 326 aa5.03□□□□□ -1.6
RTTN-204ENST00000579986 CD24P25063 80 aa5.03□□□□□ -1.6
RTTN-204ENST00000579986 SUB1P53999 127 aaKnown RBP eCLIP5.03□□□□□ -1.6
RTTN-204ENST00000579986 FXYD3Q14802 87 aa5.03□□□□□ -1.6
RTTN-204ENST00000579986 TNXAQ16473 311 aa5.03□□□□□ -1.6
RTTN-204ENST00000579986 DEFB112Q30KQ8 113 aa5.03□□□□□ -1.6
RTTN-204ENST00000579986 AKIRIN2Q53H80 203 aa5.03□□□□□ -1.6
RTTN-204ENST00000579986 TMEM144Q7Z5S9 345 aa5.03□□□□□ -1.6
RTTN-204ENST00000579986 BCL6BQ8N143 479 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms