RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 DUX4L9Q6RFH8 374 aaPredicted RBP9.58□□□□□ -0.88
CDH1-210ENST00000566612 TREML4Q6UXN2 200 aa9.58□□□□□ -0.88
CDH1-210ENST00000566612 OR2T6Q8NHC8 308 aa9.58□□□□□ -0.88
CDH1-210ENST00000566612 FAM222BQ8WU58 562 aa9.58□□□□□ -0.88
CDH1-210ENST00000566612 RASL11BQ9BPW5 248 aa9.58□□□□□ -0.88
CDH1-210ENST00000566612 PPIAL4CA0A0B4J2A2 164 aa9.58□□□□□ -0.88
CDH1-210ENST00000566612 TNFSF13O75888 250 aa9.58□□□□□ -0.88
CDH1-210ENST00000566612 PPIAL4GP0DN37 164 aa9.58□□□□□ -0.88
CDH1-210ENST00000566612 CBLN1P23435 193 aa9.58□□□□□ -0.88
CDH1-210ENST00000566612 SRP14P37108 136 aaKnown RBP9.58□□□□□ -0.88
CDH1-210ENST00000566612 KRTAP27-1Q3LI81 207 aa9.58□□□□□ -0.88
CDH1-210ENST00000566612 C10orf55Q5SWW7 151 aa9.58□□□□□ -0.88
CDH1-210ENST00000566612 Q6ZPA2 131 aa9.58□□□□□ -0.88
CDH1-210ENST00000566612 SSBP3Q9BWW4 388 aaPredicted RBP9.58□□□□□ -0.88
CDH1-210ENST00000566612 FAM208BQ5VWN6 2430 aa9.58□□□□□ -0.88
CDH1-210ENST00000566612 PGPA6NDG6 321 aa9.58□□□□□ -0.88
CDH1-210ENST00000566612 MBD3L4A6NDZ8 208 aaPredicted RBP9.58□□□□□ -0.88
CDH1-210ENST00000566612 MBD3L3A6NE82 208 aaPredicted RBP9.58□□□□□ -0.88
CDH1-210ENST00000566612 C5orf52A6NGY3 159 aa9.58□□□□□ -0.88
CDH1-210ENST00000566612 MBD3L5A6NJ08 208 aaPredicted RBP9.58□□□□□ -0.88
CDH1-210ENST00000566612 C15orf61A6NNL5 157 aa9.58□□□□□ -0.88
CDH1-210ENST00000566612 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.58□□□□□ -0.88
CDH1-210ENST00000566612 OR4F17Q8NGA8 305 aa9.58□□□□□ -0.88
CDH1-210ENST00000566612 MBD3L2Q8NHZ7 208 aaPredicted RBP9.58□□□□□ -0.88
CDH1-210ENST00000566612 DERL1Q9BUN8 251 aa9.58□□□□□ -0.88
CDH1-210ENST00000566612 AMMECR1Q9Y4X0 333 aaPredicted RBP9.58□□□□□ -0.88
CDH1-210ENST00000566612 CELSR3Q9NYQ7 3312 aa9.58□□□□□ -0.88
CDH1-210ENST00000566612 GNG7O60262 68 aa9.58□□□□□ -0.88
CDH1-210ENST00000566612 HOXA5P20719 270 aa9.58□□□□□ -0.88
CDH1-210ENST00000566612 CEACAM3P40198 252 aa9.58□□□□□ -0.88
CDH1-210ENST00000566612 HLA-DRB5Q30154 266 aa9.58□□□□□ -0.88
CDH1-210ENST00000566612 OR2D3Q8NGH3 330 aa9.58□□□□□ -0.88
CDH1-210ENST00000566612 PERPQ96FX8 193 aa9.58□□□□□ -0.88
CDH1-210ENST00000566612 IMMP2LQ96T52 175 aa9.58□□□□□ -0.88
CDH1-210ENST00000566612 RNF2Q99496 336 aa9.58□□□□□ -0.88
CDH1-210ENST00000566612 GSN-AS1Q9NRJ2 163 aa9.58□□□□□ -0.88
CDH1-210ENST00000566612 TRAV34A0A0B4J273 112 aa9.57□□□□□ -0.88
CDH1-210ENST00000566612 LINC00587B1AMM8 73 aa9.57□□□□□ -0.88
CDH1-210ENST00000566612 HYPMO75409 117 aa9.57□□□□□ -0.88
CDH1-210ENST00000566612 ZNF430Q9H8G1 570 aaPredicted RBP9.57□□□□□ -0.88
CDH1-210ENST00000566612 VPS13AQ96RL7 3174 aa9.57□□□□□ -0.88
CDH1-210ENST00000566612 TRAV1-1A0A0B4J248 108 aa9.57□□□□□ -0.88
CDH1-210ENST00000566612 HIST1H1BP16401 226 aaKnown RBP9.57□□□□□ -0.88
CDH1-210ENST00000566612 CENPWQ5EE01 88 aa9.57□□□□□ -0.88
CDH1-210ENST00000566612 IBA57Q5T440 356 aaKnown RBP9.57□□□□□ -0.88
CDH1-210ENST00000566612 SPATA31B1PQ5VZV4 182 aa9.57□□□□□ -0.88
CDH1-210ENST00000566612 PNKDQ8N490 385 aa9.57□□□□□ -0.88
CDH1-210ENST00000566612 TMEM186Q96B77 213 aa9.57□□□□□ -0.88
CDH1-210ENST00000566612 TXNDC17Q9BRA2 123 aa9.57□□□□□ -0.88
CDH1-210ENST00000566612 CHRDL1Q9BU40 450 aa9.57□□□□□ -0.88
CDH1-210ENST00000566612 IFI27L2Q9H2X8 130 aa9.57□□□□□ -0.88
CDH1-210ENST00000566612 LINC00312Q9Y6C7 94 aa9.57□□□□□ -0.88
CDH1-210ENST00000566612 ACACBO00763 2458 aa9.57□□□□□ -0.88
CDH1-210ENST00000566612 TNCP24821 2201 aa9.57□□□□□ -0.88
CDH1-210ENST00000566612 C15orf62A8K5M9 175 aa9.57□□□□□ -0.88
CDH1-210ENST00000566612 TIMP3P35625 211 aa9.57□□□□□ -0.88
CDH1-210ENST00000566612 HAPLN4Q86UW8 402 aa9.57□□□□□ -0.88
CDH1-210ENST00000566612 MMD2Q8IY49 270 aa9.57□□□□□ -0.88
CDH1-210ENST00000566612 VAMP8Q9BV40 100 aa9.57□□□□□ -0.88
CDH1-210ENST00000566612 TMUB1Q9BVT8 246 aa9.57□□□□□ -0.88
CDH1-210ENST00000566612 UBTD1Q9HAC8 227 aa9.57□□□□□ -0.88
CDH1-210ENST00000566612 HIF1ANQ9NWT6 349 aa9.57□□□□□ -0.88
CDH1-210ENST00000566612 ELOVL5Q9NYP7 299 aa9.57□□□□□ -0.88
CDH1-210ENST00000566612 S4R3C0 116 aa9.57□□□□□ -0.88
CDH1-210ENST00000566612 TM4SF5O14894 197 aa9.56□□□□□ -0.88
CDH1-210ENST00000566612 CSN3P07498 182 aa9.56□□□□□ -0.88
CDH1-210ENST00000566612 LMO1P25800 156 aa9.56□□□□□ -0.88
CDH1-210ENST00000566612 Q6ZS92 163 aa9.56□□□□□ -0.88
CDH1-210ENST00000566612 LHFPL4Q7Z7J7 247 aa9.56□□□□□ -0.88
CDH1-210ENST00000566612 OSR1Q8TAX0 266 aaPredicted RBP9.56□□□□□ -0.88
CDH1-210ENST00000566612 NCOR2Q9Y618 2525 aa9.56□□□□□ -0.88
CDH1-210ENST00000566612 CFAP54Q96N23 3096 aa9.56□□□□□ -0.88
CDH1-210ENST00000566612 UPK2O00526 184 aa9.56□□□□□ -0.88
CDH1-210ENST00000566612 ZNF137PP52743 207 aa9.56□□□□□ -0.88
CDH1-210ENST00000566612 CD81P60033 236 aa9.56□□□□□ -0.88
CDH1-210ENST00000566612 MLANAQ16655 118 aa9.56□□□□□ -0.88
CDH1-210ENST00000566612 FAM209BQ5JX69 171 aa9.56□□□□□ -0.88
CDH1-210ENST00000566612 C10orf91Q5T1B1 145 aa9.56□□□□□ -0.88
CDH1-210ENST00000566612 FAM90A2PQ658T7 463 aa9.56□□□□□ -0.88
CDH1-210ENST00000566612 GGTLC1Q9BX51 225 aa9.56□□□□□ -0.88
CDH1-210ENST00000566612 SEPSECSQ9HD40 501 aaKnown RBP9.56□□□□□ -0.88
CDH1-210ENST00000566612 RPUSD1Q9UJJ7 312 aaKnown RBP9.56□□□□□ -0.88
CDH1-210ENST00000566612 RBFOX2O43251 390 aaKnown RBP eCLIP9.56□□□□□ -0.88
CDH1-210ENST00000566612 EFNB3Q15768 340 aa9.56□□□□□ -0.88
CDH1-210ENST00000566612 TCF23Q7RTU1 214 aa9.56□□□□□ -0.88
CDH1-210ENST00000566612 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.56□□□□□ -0.88
CDH1-210ENST00000566612 VN1R17PQ8TDU5 208 aa9.56□□□□□ -0.88
CDH1-210ENST00000566612 MRPL18Q9H0U6 180 aaKnown RBP9.56□□□□□ -0.88
CDH1-210ENST00000566612 FBXL15Q9H469 300 aa9.56□□□□□ -0.88
CDH1-210ENST00000566612 PAM16Q9Y3D7 125 aa9.56□□□□□ -0.88
CDH1-210ENST00000566612 IGHV3-35A0A0C4DH35 117 aa9.55□□□□□ -0.88
CDH1-210ENST00000566612 A0A1B0GW64 132 aa9.55□□□□□ -0.88
CDH1-210ENST00000566612 VENTXO95231 258 aa9.55□□□□□ -0.88
CDH1-210ENST00000566612 IGKV1D-33P01593 117 aa9.55□□□□□ -0.88
CDH1-210ENST00000566612 IGKV1-33P01594 117 aa9.55□□□□□ -0.88
CDH1-210ENST00000566612 IGKV1-16P04430 117 aa9.55□□□□□ -0.88
CDH1-210ENST00000566612 CD24P25063 80 aa9.55□□□□□ -0.88
CDH1-210ENST00000566612 COL8A1P27658 744 aa9.55□□□□□ -0.88
CDH1-210ENST00000566612 APOBEC3AP31941 199 aaPredicted RBP9.55□□□□□ -0.88
CDH1-210ENST00000566612 ZNF726P1Q15940 193 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms