RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 RUSC1-AS1Q66K80 236 aa14.42□□□□□ -0.1
COMMD4-208ENST00000563220 NPBQ8NG41 125 aa14.42□□□□□ -0.1
COMMD4-208ENST00000563220 RSG1Q9BU20 258 aa14.42□□□□□ -0.1
COMMD4-208ENST00000563220 PARD6GQ9BYG4 376 aaPredicted RBP14.42□□□□□ -0.1
COMMD4-208ENST00000563220 TREM1Q9NP99 234 aa14.42□□□□□ -0.1
COMMD4-208ENST00000563220 FHITP49789 147 aa14.42□□□□□ -0.1
COMMD4-208ENST00000563220 SSBP2P81877 361 aaPredicted RBP14.42□□□□□ -0.1
COMMD4-208ENST00000563220 SRSF3P84103 164 aaKnown RBP14.42□□□□□ -0.1
COMMD4-208ENST00000563220 WT1-ASQ06250 92 aa14.42□□□□□ -0.1
COMMD4-208ENST00000563220 EBI3Q14213 229 aa14.42□□□□□ -0.1
COMMD4-208ENST00000563220 TNXAQ16473 311 aa14.42□□□□□ -0.1
COMMD4-208ENST00000563220 Q5PR19 223 aa14.42□□□□□ -0.1
COMMD4-208ENST00000563220 OR2T10Q8NGZ9 312 aa14.42□□□□□ -0.1
COMMD4-208ENST00000563220 TAF15Q92804 592 aaKnown RBP eCLIP14.42□□□□□ -0.1
COMMD4-208ENST00000563220 MBD6Q96DN6 1003 aa14.42□□□□□ -0.1
COMMD4-208ENST00000563220 HRH4Q9H3N8 390 aa14.42□□□□□ -0.1
COMMD4-208ENST00000563220 C7orf69Q9H7B7 122 aa14.42□□□□□ -0.1
COMMD4-208ENST00000563220 APCP25054 2843 aa14.42□□□□□ -0.1
COMMD4-208ENST00000563220 IGHV1-69DA0A0B4J2H0 117 aa14.41□□□□□ -0.1
COMMD4-208ENST00000563220 A0A1W2PN81 502 aa14.41□□□□□ -0.1
COMMD4-208ENST00000563220 RNF223E7ERA6 249 aa14.41□□□□□ -0.1
COMMD4-208ENST00000563220 NBR2O15453 112 aa14.41□□□□□ -0.1
COMMD4-208ENST00000563220 NDUFA3O95167 84 aa14.41□□□□□ -0.1
COMMD4-208ENST00000563220 SNAPINO95295 136 aa14.41□□□□□ -0.1
COMMD4-208ENST00000563220 IGHV1-69P01742 117 aa14.41□□□□□ -0.1
COMMD4-208ENST00000563220 CD5P06127 495 aa14.41□□□□□ -0.1
COMMD4-208ENST00000563220 RNASE2P10153 161 aaKnown RBP14.41□□□□□ -0.1
COMMD4-208ENST00000563220 CHRNA7P36544 502 aa14.41□□□□□ -0.1
COMMD4-208ENST00000563220 AKR1C1Q04828 323 aa14.41□□□□□ -0.1
COMMD4-208ENST00000563220 GUCA2BQ16661 112 aa14.41□□□□□ -0.1
COMMD4-208ENST00000563220 FAM120AOSQ5T036 256 aa14.41□□□□□ -0.1
COMMD4-208ENST00000563220 COMMD1Q8N668 190 aa14.41□□□□□ -0.1
COMMD4-208ENST00000563220 Q8N6K4 173 aa14.41□□□□□ -0.1
COMMD4-208ENST00000563220 TRAV40A0A0B4J280 105 aa14.4□□□□□ -0.1
COMMD4-208ENST00000563220 MDKP21741 143 aaPredicted RBP14.4□□□□□ -0.1
COMMD4-208ENST00000563220 MAS1LP35410 378 aa14.4□□□□□ -0.1
COMMD4-208ENST00000563220 COMPP49747 757 aaPredicted RBP14.4□□□□□ -0.1
COMMD4-208ENST00000563220 ERHP84090 104 aaKnown RBP14.4□□□□□ -0.1
COMMD4-208ENST00000563220 LOXL1Q08397 574 aaPredicted RBP14.4□□□□□ -0.1
COMMD4-208ENST00000563220 C2orf83Q53S99 150 aa14.4□□□□□ -0.1
COMMD4-208ENST00000563220 LINC01356Q8N9X3 169 aa14.4□□□□□ -0.1
COMMD4-208ENST00000563220 FBXO7Q9Y3I1 522 aa14.4□□□□□ -0.1
COMMD4-208ENST00000563220 TRAV20A0A0B4J274 112 aa14.4□□□□□ -0.1
COMMD4-208ENST00000563220 ACTL6BO94805 426 aa14.4□□□□□ -0.1
COMMD4-208ENST00000563220 SCAF4O95104 1147 aaKnown RBP14.4□□□□□ -0.1
COMMD4-208ENST00000563220 AVPP01185 164 aa14.4□□□□□ -0.1
COMMD4-208ENST00000563220 IGHV4-38-2P0DP08 117 aa14.4□□□□□ -0.1
COMMD4-208ENST00000563220 RPL27AP46776 148 aaKnown RBP14.4□□□□□ -0.1
COMMD4-208ENST00000563220 GNB1P62873 340 aa14.4□□□□□ -0.1
COMMD4-208ENST00000563220 PLGLAQ15195 96 aa14.4□□□□□ -0.1
COMMD4-208ENST00000563220 BRD3OSQ6XYD6 125 aa14.4□□□□□ -0.1
COMMD4-208ENST00000563220 KRTAP1-3Q8IUG1 177 aa14.4□□□□□ -0.1
COMMD4-208ENST00000563220 PLXNB1O43157 2135 aa14.39□□□□□ -0.11
COMMD4-208ENST00000563220 OR13C7P0DN81 318 aa14.39□□□□□ -0.11
COMMD4-208ENST00000563220 SNCAP37840 140 aa14.39□□□□□ -0.11
COMMD4-208ENST00000563220 RAB5CP51148 216 aa14.39□□□□□ -0.11
COMMD4-208ENST00000563220 Q6ZRG5 221 aa14.39□□□□□ -0.11
COMMD4-208ENST00000563220 GGACTQ9BVM4 153 aa14.39□□□□□ -0.11
COMMD4-208ENST00000563220 IGLC7A0M8Q6 106 aa14.38□□□□□ -0.11
COMMD4-208ENST00000563220 FGF7P21781 194 aa14.38□□□□□ -0.11
COMMD4-208ENST00000563220 ATP5IP56385 69 aaPredicted RBP14.38□□□□□ -0.11
COMMD4-208ENST00000563220 DLK1P80370 383 aa14.38□□□□□ -0.11
COMMD4-208ENST00000563220 KIAA1456Q9P272 454 aa14.38□□□□□ -0.11
COMMD4-208ENST00000563220 PRH1P02810 166 aa14.38□□□□□ -0.11
COMMD4-208ENST00000563220 C5orf64Q2M2E5 130 aa14.38□□□□□ -0.11
COMMD4-208ENST00000563220 ARSJQ5FYB0 599 aaPredicted RBP14.38□□□□□ -0.11
COMMD4-208ENST00000563220 PSMG3Q9BT73 122 aaPredicted RBP14.38□□□□□ -0.11
COMMD4-208ENST00000563220 WDR83OSQ9Y284 106 aa14.38□□□□□ -0.11
COMMD4-208ENST00000563220 SMCO3A2RU48 225 aa14.37□□□□□ -0.11
COMMD4-208ENST00000563220 TEX22C9J3V5 150 aa14.37□□□□□ -0.11
COMMD4-208ENST00000563220 UMAD1C9J7I0 102 aa14.37□□□□□ -0.11
COMMD4-208ENST00000563220 REG1AP05451 166 aa14.37□□□□□ -0.11
COMMD4-208ENST00000563220 FAM106CPP0CH98 169 aa14.37□□□□□ -0.11
COMMD4-208ENST00000563220 APELAP0DMC3 54 aa14.37□□□□□ -0.11
COMMD4-208ENST00000563220 AREGP15514 252 aa14.37□□□□□ -0.11
COMMD4-208ENST00000563220 TMEM11P17152 192 aa14.37□□□□□ -0.11
COMMD4-208ENST00000563220 GATA3P23771 443 aa14.37□□□□□ -0.11
COMMD4-208ENST00000563220 BRS3P32247 399 aa14.37□□□□□ -0.11
COMMD4-208ENST00000563220 CAMLGP49069 296 aa14.37□□□□□ -0.11
COMMD4-208ENST00000563220 TREML4Q6UXN2 200 aa14.37□□□□□ -0.11
COMMD4-208ENST00000563220 CENPVQ7Z7K6 275 aaPredicted RBP14.37□□□□□ -0.11
COMMD4-208ENST00000563220 SRSF12Q8WXF0 261 aaKnown RBP14.37□□□□□ -0.11
COMMD4-208ENST00000563220 Q96MF0 132 aa14.37□□□□□ -0.11
COMMD4-208ENST00000563220 P2RX4Q99571 388 aa14.37□□□□□ -0.11
COMMD4-208ENST00000563220 VSIRQ9H7M9 311 aa14.37□□□□□ -0.11
COMMD4-208ENST00000563220 SOX21Q9Y651 276 aaPredicted RBP14.37□□□□□ -0.11
COMMD4-208ENST00000563220 FLI1Q01543 452 aaPredicted RBP14.36□□□□□ -0.11
COMMD4-208ENST00000563220 MLANAQ16655 118 aa14.36□□□□□ -0.11
COMMD4-208ENST00000563220 KLF17Q5JT82 389 aaPredicted RBP14.36□□□□□ -0.11
COMMD4-208ENST00000563220 AKR1C8PQ5T2L2 129 aa14.36□□□□□ -0.11
COMMD4-208ENST00000563220 PRSS57Q6UWY2 283 aa14.36□□□□□ -0.11
COMMD4-208ENST00000563220 FAM213BQ8TBF2 198 aa14.36□□□□□ -0.11
COMMD4-208ENST00000563220 NPCDR1Q9BY65 106 aa14.36□□□□□ -0.11
COMMD4-208ENST00000563220 TMEM231Q9H6L2 316 aa14.36□□□□□ -0.11
COMMD4-208ENST00000563220 FAM96BQ9Y3D0 163 aa14.36□□□□□ -0.11
COMMD4-208ENST00000563220 A0A0U1RQK1 487 aa14.35□□□□□ -0.11
COMMD4-208ENST00000563220 NCBP2LA6PVI3 153 aaKnown RBP14.35□□□□□ -0.11
COMMD4-208ENST00000563220 TGFAP01135 160 aa14.35□□□□□ -0.11
COMMD4-208ENST00000563220 TIMM9Q9Y5J7 89 aa14.35□□□□□ -0.11
COMMD4-208ENST00000563220 SFTA3P0C7M3 94 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms