RNA–Protein interactions for RNA: ENST00000560013.5

TM2D3-209, Transcript of TM2 domain containing 3, humanhuman

TSL 2

Gene TM2D3, Length 1,868 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-209ENST00000560013 SMCO3A2RU48 225 aa18.79■□□□□ 0.6
TM2D3-209ENST00000560013 DPPA3Q6W0C5 159 aa18.79■□□□□ 0.6
TM2D3-209ENST00000560013 MRPL41Q8IXM3 137 aaKnown RBP18.79■□□□□ 0.6
TM2D3-209ENST00000560013 C1orf159Q96HA4 380 aa18.79■□□□□ 0.6
TM2D3-209ENST00000560013 NPCDR1Q9BY65 106 aa18.79■□□□□ 0.6
TM2D3-209ENST00000560013 FCN1O00602 326 aa18.78■□□□□ 0.6
TM2D3-209ENST00000560013 OR13C7P0DN81 318 aa18.78■□□□□ 0.6
TM2D3-209ENST00000560013 GNB1P62873 340 aa18.78■□□□□ 0.6
TM2D3-209ENST00000560013 TREML4Q6UXN2 200 aa18.78■□□□□ 0.6
TM2D3-209ENST00000560013 NPVFQ9HCQ7 196 aa18.78■□□□□ 0.6
TM2D3-209ENST00000560013 TENM4Q6N022 2769 aa18.78■□□□□ 0.6
TM2D3-209ENST00000560013 MPDU1O75352 247 aa18.77■□□□□ 0.6
TM2D3-209ENST00000560013 SUB1P53999 127 aaKnown RBP eCLIP18.77■□□□□ 0.6
TM2D3-209ENST00000560013 FBLN7Q53RD9 439 aa18.77■□□□□ 0.6
TM2D3-209ENST00000560013 Q8N6K4 173 aa18.77■□□□□ 0.6
TM2D3-209ENST00000560013 ZNF709Q8N972 641 aa18.77■□□□□ 0.6
TM2D3-209ENST00000560013 NARS2Q96I59 477 aaKnown RBP18.77■□□□□ 0.6
TM2D3-209ENST00000560013 IGHV1-69DA0A0B4J2H0 117 aa18.77■□□□□ 0.6
TM2D3-209ENST00000560013 TMEM218A2RU14 115 aa18.77■□□□□ 0.6
TM2D3-209ENST00000560013 TSPAN15O95858 294 aa18.77■□□□□ 0.6
TM2D3-209ENST00000560013 IGHV1-69P01742 117 aa18.77■□□□□ 0.6
TM2D3-209ENST00000560013 BRS3P32247 399 aa18.77■□□□□ 0.6
TM2D3-209ENST00000560013 ARSJQ5FYB0 599 aaPredicted RBP18.77■□□□□ 0.6
TM2D3-209ENST00000560013 C7orf69Q9H7B7 122 aa18.77■□□□□ 0.6
TM2D3-209ENST00000560013 HIF1ANQ9NWT6 349 aa18.77■□□□□ 0.6
TM2D3-209ENST00000560013 CSMD2Q7Z408 3487 aa18.76■□□□□ 0.59
TM2D3-209ENST00000560013 TRAV20A0A0B4J274 112 aa18.76■□□□□ 0.59
TM2D3-209ENST00000560013 IGLC7A0M8Q6 106 aa18.76■□□□□ 0.59
TM2D3-209ENST00000560013 FNDC10F2Z333 226 aa18.76■□□□□ 0.59
TM2D3-209ENST00000560013 C17orf112F2Z3M2 114 aa18.76■□□□□ 0.59
TM2D3-209ENST00000560013 FAM106CPP0CH98 169 aa18.76■□□□□ 0.59
TM2D3-209ENST00000560013 GATA3P23771 443 aa18.76■□□□□ 0.59
TM2D3-209ENST00000560013 RPRMQ9NS64 109 aa18.76■□□□□ 0.59
TM2D3-209ENST00000560013 TRAV40A0A0B4J280 105 aa18.75■□□□□ 0.59
TM2D3-209ENST00000560013 APOC3P02656 99 aa18.75■□□□□ 0.59
TM2D3-209ENST00000560013 TMEM11P17152 192 aa18.75■□□□□ 0.59
TM2D3-209ENST00000560013 SSBP2P81877 361 aaPredicted RBP18.75■□□□□ 0.59
TM2D3-209ENST00000560013 SRSF12Q8WXF0 261 aaKnown RBP18.75■□□□□ 0.59
TM2D3-209ENST00000560013 P2RX4Q99571 388 aa18.75■□□□□ 0.59
TM2D3-209ENST00000560013 VSIRQ9H7M9 311 aa18.75■□□□□ 0.59
TM2D3-209ENST00000560013 PTPN13Q12923 2485 aa18.75■□□□□ 0.59
TM2D3-209ENST00000560013 SRSF3P84103 164 aaKnown RBP18.75■□□□□ 0.59
TM2D3-209ENST00000560013 AKR1C1Q04828 323 aa18.75■□□□□ 0.59
TM2D3-209ENST00000560013 C5orf64Q2M2E5 130 aa18.75■□□□□ 0.59
TM2D3-209ENST00000560013 LINC01356Q8N9X3 169 aa18.75■□□□□ 0.59
TM2D3-209ENST00000560013 H2AFB1P0C5Y9 115 aa18.74■□□□□ 0.59
TM2D3-209ENST00000560013 ELLP55199 621 aaPredicted RBP18.74■□□□□ 0.59
TM2D3-209ENST00000560013 LOXL1Q08397 574 aaPredicted RBP18.74■□□□□ 0.59
TM2D3-209ENST00000560013 TMEM41BQ5BJD5 291 aa18.74■□□□□ 0.59
TM2D3-209ENST00000560013 RUSC1-AS1Q66K80 236 aa18.74■□□□□ 0.59
TM2D3-209ENST00000560013 HIST2H2BCQ6DN03 193 aa18.74■□□□□ 0.59
TM2D3-209ENST00000560013 MBD6Q96DN6 1003 aa18.74■□□□□ 0.59
TM2D3-209ENST00000560013 IGHV3OR16-10A0A075B7F0 116 aa18.73■□□□□ 0.59
TM2D3-209ENST00000560013 CNIH1O95406 144 aa18.73■□□□□ 0.59
TM2D3-209ENST00000560013 REG1AP05451 166 aa18.73■□□□□ 0.59
TM2D3-209ENST00000560013 Q5PR19 223 aa18.73■□□□□ 0.59
TM2D3-209ENST00000560013 COMMD1Q8N668 190 aa18.73■□□□□ 0.59
TM2D3-209ENST00000560013 LSM4Q9Y4Z0 139 aaKnown RBP18.73■□□□□ 0.59
TM2D3-209ENST00000560013 NCBP2LA6PVI3 153 aaKnown RBP18.73■□□□□ 0.59
TM2D3-209ENST00000560013 TEX22C9J3V5 150 aa18.73■□□□□ 0.59
TM2D3-209ENST00000560013 AGPAT2O15120 278 aa18.73■□□□□ 0.59
TM2D3-209ENST00000560013 CD69Q07108 199 aa18.73■□□□□ 0.59
TM2D3-209ENST00000560013 FAM120AOSQ5T036 256 aa18.73■□□□□ 0.59
TM2D3-209ENST00000560013 ACSM6Q6P461 480 aa18.73■□□□□ 0.59
TM2D3-209ENST00000560013 TEPPQ6URK8 271 aa18.73■□□□□ 0.59
TM2D3-209ENST00000560013 ZNF114Q8NC26 417 aa18.73■□□□□ 0.59
TM2D3-209ENST00000560013 RNASEH2CQ8TDP1 164 aaKnown RBP18.73■□□□□ 0.59
TM2D3-209ENST00000560013 NAV3Q8IVL0 2385 aa18.72■□□□□ 0.59
TM2D3-209ENST00000560013 AREGP15514 252 aa18.72■□□□□ 0.59
TM2D3-209ENST00000560013 ADCYAP1P18509 176 aa18.72■□□□□ 0.59
TM2D3-209ENST00000560013 GPX4P36969 197 aaPredicted RBP18.72■□□□□ 0.59
TM2D3-209ENST00000560013 CACNG8Q8WXS5 425 aa18.72■□□□□ 0.59
TM2D3-209ENST00000560013 MGST2Q99735 147 aa18.72■□□□□ 0.59
TM2D3-209ENST00000560013 SRSF8Q9BRL6 282 aaKnown RBP18.72■□□□□ 0.59
TM2D3-209ENST00000560013 CENPEQ02224 2701 aa18.72■□□□□ 0.59
TM2D3-209ENST00000560013 RNF223E7ERA6 249 aa18.71■□□□□ 0.59
TM2D3-209ENST00000560013 MBP02144 154 aa18.71■□□□□ 0.59
TM2D3-209ENST00000560013 FFAR4Q5NUL3 377 aa18.71■□□□□ 0.59
TM2D3-209ENST00000560013 BRD3OSQ6XYD6 125 aa18.71■□□□□ 0.59
TM2D3-209ENST00000560013 C1RLQ9NZP8 487 aa18.71■□□□□ 0.59
TM2D3-209ENST00000560013 APELAP0DMC3 54 aa18.71■□□□□ 0.59
TM2D3-209ENST00000560013 IGHV4-38-2P0DP08 117 aa18.71■□□□□ 0.59
TM2D3-209ENST00000560013 MLANAQ16655 118 aa18.71■□□□□ 0.59
TM2D3-209ENST00000560013 C10orf91Q5T1B1 145 aa18.71■□□□□ 0.59
TM2D3-209ENST00000560013 TMEM144Q7Z5S9 345 aa18.71■□□□□ 0.59
TM2D3-209ENST00000560013 SFT2D1Q8WV19 159 aa18.71■□□□□ 0.59
TM2D3-209ENST00000560013 TMEM231Q9H6L2 316 aa18.71■□□□□ 0.59
TM2D3-209ENST00000560013 TREM1Q9NP99 234 aa18.71■□□□□ 0.59
TM2D3-209ENST00000560013 POLQO75417 2590 aa18.7■□□□□ 0.58
TM2D3-209ENST00000560013 SOX15O60248 233 aa18.7■□□□□ 0.58
TM2D3-209ENST00000560013 OPRK1P41145 380 aa18.7■□□□□ 0.58
TM2D3-209ENST00000560013 GAMTQ14353 236 aa18.7■□□□□ 0.58
TM2D3-209ENST00000560013 FXYD3Q14802 87 aa18.7■□□□□ 0.58
TM2D3-209ENST00000560013 SPSB3Q6PJ21 355 aa18.7■□□□□ 0.58
TM2D3-209ENST00000560013 ATRAIDQ6UW56 229 aa18.7■□□□□ 0.58
TM2D3-209ENST00000560013 PRSS57Q6UWY2 283 aa18.7■□□□□ 0.58
TM2D3-209ENST00000560013 LFNGQ8NES3 379 aa18.7■□□□□ 0.58
TM2D3-209ENST00000560013 SSMEM1Q8WWF3 244 aa18.7■□□□□ 0.58
TM2D3-209ENST00000560013 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.7■□□□□ 0.584e-8■■□□□ 14.5
TM2D3-209ENST00000560013 A0A1B0GV50 99 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms