RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 NEO1Q92859 1461 aa2.77□□□□□ -1.97
SCFD1-211ENST00000554437 IGKV1D-17A0A075B6S4 117 aa2.76□□□□□ -1.97
SCFD1-211ENST00000554437 TRAV36DV7A0A075B6V5 113 aa2.76□□□□□ -1.97
SCFD1-211ENST00000554437 A0A087WUU8 490 aa2.76□□□□□ -1.97
SCFD1-211ENST00000554437 TRAV38-1A0A0B4J264 116 aa2.76□□□□□ -1.97
SCFD1-211ENST00000554437 TRAV40A0A0B4J280 105 aa2.76□□□□□ -1.97
SCFD1-211ENST00000554437 A0A1B0GX51 115 aa2.76□□□□□ -1.97
SCFD1-211ENST00000554437 C7orf66A4D0T2 115 aa2.76□□□□□ -1.97
SCFD1-211ENST00000554437 TMEM189A5PLL7 270 aa2.76□□□□□ -1.97
SCFD1-211ENST00000554437 SLC25A20O43772 301 aa2.76□□□□□ -1.97
SCFD1-211ENST00000554437 SH2D1AO60880 128 aa2.76□□□□□ -1.97
SCFD1-211ENST00000554437 SULT1C4O75897 302 aa2.76□□□□□ -1.97
SCFD1-211ENST00000554437 LHBP01229 141 aa2.76□□□□□ -1.97
SCFD1-211ENST00000554437 PRM2P04554 102 aa2.76□□□□□ -1.97
SCFD1-211ENST00000554437 LINC00869P0C866 280 aa2.76□□□□□ -1.97
SCFD1-211ENST00000554437 OGNP20774 298 aaKnown RBP2.76□□□□□ -1.97
SCFD1-211ENST00000554437 CASP1P29466 404 aa2.76□□□□□ -1.97
SCFD1-211ENST00000554437 SDC4P31431 198 aa2.76□□□□□ -1.97
SCFD1-211ENST00000554437 MPV17P39210 176 aa2.76□□□□□ -1.97
SCFD1-211ENST00000554437 GABRA2P47869 451 aa2.76□□□□□ -1.97
SCFD1-211ENST00000554437 POLR2HP52434 150 aaKnown RBP2.76□□□□□ -1.97
SCFD1-211ENST00000554437 RPS11P62280 158 aaKnown RBP eCLIP2.76□□□□□ -1.97
SCFD1-211ENST00000554437 CCL20P78556 96 aa2.76□□□□□ -1.97
SCFD1-211ENST00000554437 LGALS9BQ3B8N2 356 aa2.76□□□□□ -1.97
SCFD1-211ENST00000554437 C10orf91Q5T1B1 145 aa2.76□□□□□ -1.97
SCFD1-211ENST00000554437 LGALS9CQ6DKI2 356 aa2.76□□□□□ -1.97
SCFD1-211ENST00000554437 ZNF880Q6PDB4 577 aa2.76□□□□□ -1.97
SCFD1-211ENST00000554437 SLC25A34Q6PIV7 304 aa2.76□□□□□ -1.97
SCFD1-211ENST00000554437 ADM2Q7Z4H4 148 aa2.76□□□□□ -1.97
SCFD1-211ENST00000554437 SPANXA2-OT1Q8N9U9 137 aa2.76□□□□□ -1.97
SCFD1-211ENST00000554437 RPS4Y2Q8TD47 263 aa2.76□□□□□ -1.97
SCFD1-211ENST00000554437 IP6K3Q96PC2 410 aa2.76□□□□□ -1.97
SCFD1-211ENST00000554437 VPS25Q9BRG1 176 aa2.76□□□□□ -1.97
SCFD1-211ENST00000554437 PCTPQ9UKL6 214 aa2.76□□□□□ -1.97
SCFD1-211ENST00000554437 FUT9Q9Y231 359 aa2.76□□□□□ -1.97
SCFD1-211ENST00000554437 LAMTOR2Q9Y2Q5 125 aa2.76□□□□□ -1.97
SCFD1-211ENST00000554437 NUP214P35658 2090 aaPredicted RBP2.76□□□□□ -1.97
SCFD1-211ENST00000554437 ZCCHC11Q5TAX3 1644 aaKnown RBP2.75□□□□□ -1.97
SCFD1-211ENST00000554437 HECW1Q76N89 1606 aa2.75□□□□□ -1.97
SCFD1-211ENST00000554437 TRBV24-1A0A075B6N3 115 aa2.75□□□□□ -1.97
SCFD1-211ENST00000554437 IGKV1D-43A0A0B4J1Z2 117 aa2.75□□□□□ -1.97
SCFD1-211ENST00000554437 TRAV41A0A0B4J266 112 aa2.75□□□□□ -1.97
SCFD1-211ENST00000554437 H3BMM0 161 aa2.75□□□□□ -1.97
SCFD1-211ENST00000554437 IGKV1-17P01599 117 aa2.75□□□□□ -1.97
SCFD1-211ENST00000554437 IGKV1-5P01602 117 aa2.75□□□□□ -1.97
SCFD1-211ENST00000554437 IGHV3-30-3P0DP02 117 aa2.75□□□□□ -1.97
SCFD1-211ENST00000554437 RPS3P23396 243 aaKnown RBP eCLIP2.75□□□□□ -1.97
SCFD1-211ENST00000554437 CA5AP35218 305 aa2.75□□□□□ -1.97
SCFD1-211ENST00000554437 LPAR6P43657 344 aa2.75□□□□□ -1.97
SCFD1-211ENST00000554437 RPL27AP46776 148 aaKnown RBP2.75□□□□□ -1.97
SCFD1-211ENST00000554437 TAS2R20P59543 309 aa2.75□□□□□ -1.97
SCFD1-211ENST00000554437 NDUFA5Q16718 116 aa2.75□□□□□ -1.97
SCFD1-211ENST00000554437 AADACL3Q5VUY0 350 aa2.75□□□□□ -1.97
SCFD1-211ENST00000554437 LCA10Q71F78 164 aa2.75□□□□□ -1.97
SCFD1-211ENST00000554437 SPATA12Q7Z6I5 190 aa2.75□□□□□ -1.97
SCFD1-211ENST00000554437 KTN1-AS1Q86SY8 53 aa2.75□□□□□ -1.97
SCFD1-211ENST00000554437 OR5A1Q8NGJ0 315 aa2.75□□□□□ -1.97
SCFD1-211ENST00000554437 FNDC9Q8TBE3 224 aa2.75□□□□□ -1.97
SCFD1-211ENST00000554437 UBE2WQ96B02 151 aa2.75□□□□□ -1.97
SCFD1-211ENST00000554437 ISOC1Q96CN7 298 aa2.75□□□□□ -1.97
SCFD1-211ENST00000554437 SEC22CQ9BRL7 303 aa2.75□□□□□ -1.97
SCFD1-211ENST00000554437 TM2D3Q9BRN9 247 aa2.75□□□□□ -1.97
SCFD1-211ENST00000554437 RNF122Q9H9V4 155 aa2.75□□□□□ -1.97
SCFD1-211ENST00000554437 IL36BQ9NZH7 164 aa2.75□□□□□ -1.97
SCFD1-211ENST00000554437 TP73-AS1Q9UF72 201 aa2.75□□□□□ -1.97
SCFD1-211ENST00000554437 HSPB8Q9UJY1 196 aa2.75□□□□□ -1.97
SCFD1-211ENST00000554437 ICOSQ9Y6W8 199 aa2.75□□□□□ -1.97
SCFD1-211ENST00000554437 COL1A2P08123 1366 aa2.74□□□□□ -1.97
SCFD1-211ENST00000554437 PLXNB3Q9ULL4 1909 aa2.74□□□□□ -1.97
SCFD1-211ENST00000554437 TRAPPC2LH3BP13 241 aa2.74□□□□□ -1.97
SCFD1-211ENST00000554437 K7EP13 123 aa2.74□□□□□ -1.97
SCFD1-211ENST00000554437 ZNF73O43830 326 aaPredicted RBP2.74□□□□□ -1.97
SCFD1-211ENST00000554437 NDUFB2O95178 105 aa2.74□□□□□ -1.97
SCFD1-211ENST00000554437 IGLV3-19P01714 112 aa2.74□□□□□ -1.97
SCFD1-211ENST00000554437 SLC25A16P16260 332 aa2.74□□□□□ -1.97
SCFD1-211ENST00000554437 ZNF14P17017 642 aaPredicted RBP2.74□□□□□ -1.97
SCFD1-211ENST00000554437 SRIP30626 198 aa2.74□□□□□ -1.97
SCFD1-211ENST00000554437 CD200P41217 278 aa2.74□□□□□ -1.97
SCFD1-211ENST00000554437 CCR2P41597 374 aa2.74□□□□□ -1.97
SCFD1-211ENST00000554437 FKBP1CQ5VVH2 108 aa2.74□□□□□ -1.97
SCFD1-211ENST00000554437 RASL11AQ6T310 242 aa2.74□□□□□ -1.97
SCFD1-211ENST00000554437 C16orf47Q6ZP98 133 aaPredicted RBP2.74□□□□□ -1.97
SCFD1-211ENST00000554437 TMEM105Q8N8V8 129 aa2.74□□□□□ -1.97
SCFD1-211ENST00000554437 TMEM229BQ8NBD8 167 aa2.74□□□□□ -1.97
SCFD1-211ENST00000554437 OR5C1Q8NGR4 320 aa2.74□□□□□ -1.97
SCFD1-211ENST00000554437 MGLLQ99685 303 aa2.74□□□□□ -1.97
SCFD1-211ENST00000554437 RTL8AQ9BWD3 113 aa2.74□□□□□ -1.97
SCFD1-211ENST00000554437 C11orf1Q9H5F2 150 aa2.74□□□□□ -1.97
SCFD1-211ENST00000554437 CKLFQ9UBR5 152 aa2.74□□□□□ -1.97
SCFD1-211ENST00000554437 MED31Q9Y3C7 131 aa2.74□□□□□ -1.97
SCFD1-211ENST00000554437 CRB1P82279 1406 aa2.74□□□□□ -1.97
SCFD1-211ENST00000554437 RPRD2Q5VT52 1461 aaKnown RBP2.73□□□□□ -1.97
SCFD1-211ENST00000554437 WDR7Q9Y4E6 1490 aa2.73□□□□□ -1.97
SCFD1-211ENST00000554437 A0A0B4J2C4 111 aa2.73□□□□□ -1.97
SCFD1-211ENST00000554437 DHRS12A0PJE2 317 aa2.73□□□□□ -1.97
SCFD1-211ENST00000554437 A8MWP6 167 aa2.73□□□□□ -1.97
SCFD1-211ENST00000554437 C5orf58C9J3I9 102 aa2.73□□□□□ -1.97
SCFD1-211ENST00000554437 LECT2O14960 151 aa2.73□□□□□ -1.97
SCFD1-211ENST00000554437 CYB5BO43169 146 aa2.73□□□□□ -1.97
SCFD1-211ENST00000554437 APOC1P02654 83 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms