RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 GIMAP1Q8WWP7 306 aa8.54□□□□□ -1.04
PTCH1-222ENST00000551425 SRSF8Q9BRL6 282 aaKnown RBP8.54□□□□□ -1.04
PTCH1-222ENST00000551425 GINS4Q9BRT9 223 aa8.54□□□□□ -1.04
PTCH1-222ENST00000551425 NAA50Q9GZZ1 169 aaKnown RBP8.54□□□□□ -1.04
PTCH1-222ENST00000551425 PLGRKTQ9HBL7 147 aa8.54□□□□□ -1.04
PTCH1-222ENST00000551425 NDUFA13Q9P0J0 144 aa8.54□□□□□ -1.04
PTCH1-222ENST00000551425 TBC1D24Q9ULP9 559 aa8.54□□□□□ -1.04
PTCH1-222ENST00000551425 CCDC160A6NGH7 325 aa8.53□□□□□ -1.04
PTCH1-222ENST00000551425 NOTOA8MTQ0 251 aa8.53□□□□□ -1.04
PTCH1-222ENST00000551425 F8W735 103 aaPredicted RBP8.53□□□□□ -1.04
PTCH1-222ENST00000551425 SLC17A2O00624 439 aa8.53□□□□□ -1.04
PTCH1-222ENST00000551425 CYB5BO43169 146 aa8.53□□□□□ -1.04
PTCH1-222ENST00000551425 TMEM127O75204 238 aa8.53□□□□□ -1.04
PTCH1-222ENST00000551425 CD5P06127 495 aa8.53□□□□□ -1.04
PTCH1-222ENST00000551425 FCGR3AP08637 254 aa8.53□□□□□ -1.04
PTCH1-222ENST00000551425 OR10A3P58181 314 aa8.53□□□□□ -1.04
PTCH1-222ENST00000551425 NCS1P62166 190 aa8.53□□□□□ -1.04
PTCH1-222ENST00000551425 MXD1Q05195 221 aa8.53□□□□□ -1.04
PTCH1-222ENST00000551425 RAB11BQ15907 218 aa8.53□□□□□ -1.04
PTCH1-222ENST00000551425 TRPT1Q86TN4 253 aaKnown RBP8.53□□□□□ -1.04
PTCH1-222ENST00000551425 CROCCP3Q8IVE0 287 aa8.53□□□□□ -1.04
PTCH1-222ENST00000551425 CSNK1G2-AS1Q8NCQ2 148 aa8.53□□□□□ -1.04
PTCH1-222ENST00000551425 ZNF414Q96IQ9 312 aa8.53□□□□□ -1.04
PTCH1-222ENST00000551425 OR10C1Q96KK4 312 aa8.53□□□□□ -1.04
PTCH1-222ENST00000551425 GFI1Q99684 422 aa8.53□□□□□ -1.04
PTCH1-222ENST00000551425 RBMX2Q9Y388 322 aaKnown RBP8.53□□□□□ -1.04
PTCH1-222ENST00000551425 TRAV2A0A0B4J234 112 aa8.52□□□□□ -1.05
PTCH1-222ENST00000551425 SMIM31A0A1B0GVY4 71 aa8.52□□□□□ -1.05
PTCH1-222ENST00000551425 IFITM5A6NNB3 132 aa8.52□□□□□ -1.05
PTCH1-222ENST00000551425 RAB27BO00194 218 aa8.52□□□□□ -1.05
PTCH1-222ENST00000551425 HRASP01112 189 aa8.52□□□□□ -1.05
PTCH1-222ENST00000551425 C4BPBP20851 252 aa8.52□□□□□ -1.05
PTCH1-222ENST00000551425 TGFBR1P36897 503 aa8.52□□□□□ -1.05
PTCH1-222ENST00000551425 BRWD1-AS2P59051 145 aa8.52□□□□□ -1.05
PTCH1-222ENST00000551425 MRPS15P82914 257 aaKnown RBP8.52□□□□□ -1.05
PTCH1-222ENST00000551425 HES5Q5TA89 166 aa8.52□□□□□ -1.05
PTCH1-222ENST00000551425 OR56B1Q8NGI3 324 aa8.52□□□□□ -1.05
PTCH1-222ENST00000551425 TMEM14BQ9NUH8 114 aa8.52□□□□□ -1.05
PTCH1-222ENST00000551425 BET1LQ9NYM9 111 aa8.52□□□□□ -1.05
PTCH1-222ENST00000551425 C21orf62Q9NYP8 219 aa8.52□□□□□ -1.05
PTCH1-222ENST00000551425 KCNK7Q9Y2U2 307 aa8.52□□□□□ -1.05
PTCH1-222ENST00000551425 IGHV3-49A0A0A0MS15 119 aa8.51□□□□□ -1.05
PTCH1-222ENST00000551425 ZNF701M0R085 212 aaPredicted RBP8.51□□□□□ -1.05
PTCH1-222ENST00000551425 SLC22A5O76082 557 aa8.51□□□□□ -1.05
PTCH1-222ENST00000551425 IGLV2-14P01704 120 aa8.51□□□□□ -1.05
PTCH1-222ENST00000551425 CTSGP08311 255 aa8.51□□□□□ -1.05
PTCH1-222ENST00000551425 CLEC2LP0C7M8 214 aa8.51□□□□□ -1.05
PTCH1-222ENST00000551425 RPS19P39019 145 aaKnown RBP8.51□□□□□ -1.05
PTCH1-222ENST00000551425 FAM3BP58499 235 aaPredicted RBP8.51□□□□□ -1.05
PTCH1-222ENST00000551425 EIF4EBP1Q13541 118 aaPredicted RBP8.51□□□□□ -1.05
PTCH1-222ENST00000551425 SFXN4Q6P4A7 337 aa8.51□□□□□ -1.05
PTCH1-222ENST00000551425 TCF24Q7RTU0 167 aa8.51□□□□□ -1.05
PTCH1-222ENST00000551425 C6orf223Q8N319 242 aa8.51□□□□□ -1.05
PTCH1-222ENST00000551425 GDPD1Q8N9F7 314 aa8.51□□□□□ -1.05
PTCH1-222ENST00000551425 SCARB1Q8WTV0 552 aa8.51□□□□□ -1.05
PTCH1-222ENST00000551425 SLC25A46Q96AG3 418 aa8.51□□□□□ -1.05
PTCH1-222ENST00000551425 DGCR14Q96DF8 476 aaKnown RBP8.51□□□□□ -1.05
PTCH1-222ENST00000551425 HSD17B10Q99714 261 aaKnown RBP8.51□□□□□ -1.05
PTCH1-222ENST00000551425 DCSTAMPQ9H295 470 aa8.51□□□□□ -1.05
PTCH1-222ENST00000551425 MS4A6AQ9H2W1 248 aa8.51□□□□□ -1.05
PTCH1-222ENST00000551425 RSL24D1Q9UHA3 163 aaKnown RBP8.51□□□□□ -1.05
PTCH1-222ENST00000551425 DAPK2Q9UIK4 370 aa8.51□□□□□ -1.05
PTCH1-222ENST00000551425 TRAV14DV4A0A0A6YYC5 116 aa8.5□□□□□ -1.05
PTCH1-222ENST00000551425 SMIM30A4D0T7 59 aa8.5□□□□□ -1.05
PTCH1-222ENST00000551425 RORCP51449 518 aa8.5□□□□□ -1.05
PTCH1-222ENST00000551425 RELQ04864 619 aaPredicted RBP8.5□□□□□ -1.05
PTCH1-222ENST00000551425 PLA2G7Q13093 441 aa8.5□□□□□ -1.05
PTCH1-222ENST00000551425 P2RY14Q15391 338 aa8.5□□□□□ -1.05
PTCH1-222ENST00000551425 C2orf76Q3KRA6 126 aa8.5□□□□□ -1.05
PTCH1-222ENST00000551425 IDNKQ5T6J7 187 aa8.5□□□□□ -1.05
PTCH1-222ENST00000551425 Q6ZS49 121 aa8.5□□□□□ -1.05
PTCH1-222ENST00000551425 SPATA12Q7Z6I5 190 aa8.5□□□□□ -1.05
PTCH1-222ENST00000551425 FAM24BQ8N5W8 94 aa8.5□□□□□ -1.05
PTCH1-222ENST00000551425 TCTEX1D2Q8WW35 142 aa8.5□□□□□ -1.05
PTCH1-222ENST00000551425 MAFIPQ8WZ33 124 aa8.5□□□□□ -1.05
PTCH1-222ENST00000551425 FAM3DQ96BQ1 224 aa8.5□□□□□ -1.05
PTCH1-222ENST00000551425 RBM38Q9H0Z9 239 aaKnown RBP8.5□□□□□ -1.05
PTCH1-222ENST00000551425 SRRM2Q9UQ35 2752 aaKnown RBP8.5□□□□□ -1.05
PTCH1-222ENST00000551425 MYCBP2O75592 4640 aa8.49□□□□□ -1.05
PTCH1-222ENST00000551425 AGRNO00468 2067 aa8.49□□□□□ -1.05
PTCH1-222ENST00000551425 H3BMQ9 156 aa8.49□□□□□ -1.05
PTCH1-222ENST00000551425 DNASE2O00115 360 aaPredicted RBP8.49□□□□□ -1.05
PTCH1-222ENST00000551425 NUPL2O15504 423 aaKnown RBP8.49□□□□□ -1.05
PTCH1-222ENST00000551425 HLA-DQB1P01920 261 aa8.49□□□□□ -1.05
PTCH1-222ENST00000551425 SERPINE2P07093 398 aa8.49□□□□□ -1.05
PTCH1-222ENST00000551425 FGF2P09038 288 aa8.49□□□□□ -1.05
PTCH1-222ENST00000551425 CLDN12P56749 244 aa8.49□□□□□ -1.05
PTCH1-222ENST00000551425 SCAND1P57086 179 aa8.49□□□□□ -1.05
PTCH1-222ENST00000551425 SPCS2Q15005 226 aa8.49□□□□□ -1.05
PTCH1-222ENST00000551425 SLC25A24Q6NUK1 477 aa8.49□□□□□ -1.05
PTCH1-222ENST00000551425 ZNF66Q6ZN08 573 aa8.49□□□□□ -1.05
PTCH1-222ENST00000551425 UBAC2Q8NBM4 344 aa8.49□□□□□ -1.05
PTCH1-222ENST00000551425 AIFM2Q9BRQ8 373 aa8.49□□□□□ -1.05
PTCH1-222ENST00000551425 QTRT1Q9BXR0 403 aaKnown RBP8.49□□□□□ -1.05
PTCH1-222ENST00000551425 COMMD5Q9GZQ3 224 aa8.49□□□□□ -1.05
PTCH1-222ENST00000551425 HRASLSQ9HDD0 168 aa8.49□□□□□ -1.05
PTCH1-222ENST00000551425 BATF3Q9NR55 127 aa8.49□□□□□ -1.05
PTCH1-222ENST00000551425 CLEC5AQ9NY25 188 aa8.49□□□□□ -1.05
PTCH1-222ENST00000551425 RAB22AQ9UL26 194 aa8.49□□□□□ -1.05
PTCH1-222ENST00000551425 OR2W1Q9Y3N9 320 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms