RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 FUT5Q11128 374 aa3.52□□□□□ -1.85
USP47-204ENST00000525078 OR8B8Q15620 311 aa3.52□□□□□ -1.85
USP47-204ENST00000525078 LGALS9BQ3B8N2 356 aa3.52□□□□□ -1.85
USP47-204ENST00000525078 LGALS9CQ6DKI2 356 aa3.52□□□□□ -1.85
USP47-204ENST00000525078 AGTRAPQ6RW13 159 aa3.52□□□□□ -1.85
USP47-204ENST00000525078 ANGPTL5Q86XS5 388 aa3.52□□□□□ -1.85
USP47-204ENST00000525078 NUP35Q8NFH5 326 aa3.52□□□□□ -1.85
USP47-204ENST00000525078 MND1Q9BWT6 205 aa3.52□□□□□ -1.85
USP47-204ENST00000525078 TMEM126AQ9H061 195 aa3.52□□□□□ -1.85
USP47-204ENST00000525078 CKLFQ9UBR5 152 aa3.52□□□□□ -1.85
USP47-204ENST00000525078 TP73-AS1Q9UF72 201 aa3.52□□□□□ -1.85
USP47-204ENST00000525078 OR5V1Q9UGF6 321 aa3.52□□□□□ -1.85
USP47-204ENST00000525078 U3KQK5 164 aa3.52□□□□□ -1.85
USP47-204ENST00000525078 LRRIQ1Q96JM4 1722 aa3.52□□□□□ -1.85
USP47-204ENST00000525078 DICER1Q9UPY3 1922 aaKnown RBP3.52□□□□□ -1.85
USP47-204ENST00000525078 ARHGAP21Q5T5U3 1957 aa3.51□□□□□ -1.85
USP47-204ENST00000525078 BORCS7-ASMTA0A0B4J1R7 106 aa3.51□□□□□ -1.85
USP47-204ENST00000525078 IGKV1D-43A0A0B4J1Z2 117 aa3.51□□□□□ -1.85
USP47-204ENST00000525078 TRAV38-1A0A0B4J264 116 aa3.51□□□□□ -1.85
USP47-204ENST00000525078 GGT3PA6NGU5 568 aa3.51□□□□□ -1.85
USP47-204ENST00000525078 CYSRT1A8MQ03 144 aa3.51□□□□□ -1.85
USP47-204ENST00000525078 TRAPPC2LH3BP13 241 aa3.51□□□□□ -1.85
USP47-204ENST00000525078 PANO1I0J062 215 aa3.51□□□□□ -1.85
USP47-204ENST00000525078 NDUFB2O95178 105 aa3.51□□□□□ -1.85
USP47-204ENST00000525078 IGKV1-5P01602 117 aa3.51□□□□□ -1.85
USP47-204ENST00000525078 IGKV3-15P01624 115 aa3.51□□□□□ -1.85
USP47-204ENST00000525078 IGLV7-43P04211 117 aa3.51□□□□□ -1.85
USP47-204ENST00000525078 DBIP07108 87 aaKnown RBP3.51□□□□□ -1.85
USP47-204ENST00000525078 IGHV3-30-3P0DP02 117 aa3.51□□□□□ -1.85
USP47-204ENST00000525078 CD200P41217 278 aa3.51□□□□□ -1.85
USP47-204ENST00000525078 SLC25A34Q6PIV7 304 aa3.51□□□□□ -1.85
USP47-204ENST00000525078 LYZL2Q7Z4W2 148 aa3.51□□□□□ -1.85
USP47-204ENST00000525078 KTN1-AS1Q86SY8 53 aa3.51□□□□□ -1.85
USP47-204ENST00000525078 LINC00612Q8N6U2 182 aa3.51□□□□□ -1.85
USP47-204ENST00000525078 UBALD1Q8TB05 177 aa3.51□□□□□ -1.85
USP47-204ENST00000525078 ADAT3Q96EY9 351 aaPredicted RBP3.51□□□□□ -1.85
USP47-204ENST00000525078 VPS25Q9BRG1 176 aa3.51□□□□□ -1.85
USP47-204ENST00000525078 DERL1Q9BUN8 251 aa3.51□□□□□ -1.85
USP47-204ENST00000525078 LAMTOR2Q9Y2Q5 125 aa3.51□□□□□ -1.85
USP47-204ENST00000525078 RALGAPA2Q2PPJ7 1873 aa3.51□□□□□ -1.85
USP47-204ENST00000525078 ZNF318Q5VUA4 2279 aa3.51□□□□□ -1.85
USP47-204ENST00000525078 ATAD5Q96QE3 1844 aa3.51□□□□□ -1.85
USP47-204ENST00000525078 DOCK6Q96HP0 2047 aa3.51□□□□□ -1.85
USP47-204ENST00000525078 PLXNC1O60486 1568 aa3.51□□□□□ -1.85
USP47-204ENST00000525078 DSCAML1Q8TD84 2053 aa3.5□□□□□ -1.85
USP47-204ENST00000525078 CROCC2H7BZ55 1655 aa3.5□□□□□ -1.85
USP47-204ENST00000525078 ERCC6Q03468 1493 aa3.5□□□□□ -1.85
USP47-204ENST00000525078 RALGAPBQ86X10 1494 aa3.5□□□□□ -1.85
USP47-204ENST00000525078 NEO1Q92859 1461 aa3.5□□□□□ -1.85
USP47-204ENST00000525078 IGKV1OR2-108A0A075B7D4 117 aa3.5□□□□□ -1.85
USP47-204ENST00000525078 A0A087WX48 190 aa3.5□□□□□ -1.85
USP47-204ENST00000525078 DHRS12A0PJE2 317 aa3.5□□□□□ -1.85
USP47-204ENST00000525078 TMEM189A5PLL7 270 aa3.5□□□□□ -1.85
USP47-204ENST00000525078 RFPL4AA6NLU0 287 aa3.5□□□□□ -1.85
USP47-204ENST00000525078 RFPL4AL1F8VTS6 287 aa3.5□□□□□ -1.85
USP47-204ENST00000525078 CYB5BO43169 146 aa3.5□□□□□ -1.85
USP47-204ENST00000525078 ZNF73O43830 326 aaPredicted RBP3.5□□□□□ -1.85
USP47-204ENST00000525078 CISD3P0C7P0 127 aa3.5□□□□□ -1.85
USP47-204ENST00000525078 GPX2P18283 190 aa3.5□□□□□ -1.85
USP47-204ENST00000525078 CRHBPP24387 322 aa3.5□□□□□ -1.85
USP47-204ENST00000525078 SRIP30626 198 aa3.5□□□□□ -1.85
USP47-204ENST00000525078 LPAR6P43657 344 aa3.5□□□□□ -1.85
USP47-204ENST00000525078 POLR2HP52434 150 aaKnown RBP3.5□□□□□ -1.85
USP47-204ENST00000525078 TAS2R30P59541 319 aa3.5□□□□□ -1.85
USP47-204ENST00000525078 RPS11P62280 158 aaKnown RBP eCLIP3.5□□□□□ -1.85
USP47-204ENST00000525078 RPS28P62857 69 aaKnown RBP3.5□□□□□ -1.85
USP47-204ENST00000525078 MEF2BQ02080 365 aaPredicted RBP3.5□□□□□ -1.85
USP47-204ENST00000525078 LDLRAD2Q5SZI1 272 aa3.5□□□□□ -1.85
USP47-204ENST00000525078 FKBP1CQ5VVH2 108 aa3.5□□□□□ -1.85
USP47-204ENST00000525078 C16orf47Q6ZP98 133 aaPredicted RBP3.5□□□□□ -1.85
USP47-204ENST00000525078 LCA10Q71F78 164 aa3.5□□□□□ -1.85
USP47-204ENST00000525078 ZNF767PQ75MW2 155 aa3.5□□□□□ -1.85
USP47-204ENST00000525078 BPIFB6Q8NFQ5 453 aa3.5□□□□□ -1.85
USP47-204ENST00000525078 OR5C1Q8NGR4 320 aa3.5□□□□□ -1.85
USP47-204ENST00000525078 ISOC1Q96CN7 298 aa3.5□□□□□ -1.85
USP47-204ENST00000525078 C11orf1Q9H5F2 150 aa3.5□□□□□ -1.85
USP47-204ENST00000525078 CACYBPQ9HB71 228 aaKnown RBP3.5□□□□□ -1.85
USP47-204ENST00000525078 TRAPPC2LQ9UL33 140 aa3.5□□□□□ -1.85
USP47-204ENST00000525078 NUBP2Q9Y5Y2 271 aa3.5□□□□□ -1.85
USP47-204ENST00000525078 KIF25-AS1Q9Y6Z4 181 aa3.5□□□□□ -1.85
USP47-204ENST00000525078 YEATS2Q9ULM3 1422 aa3.5□□□□□ -1.85
USP47-204ENST00000525078 ABCA10Q8WWZ4 1543 aa3.49□□□□□ -1.85
USP47-204ENST00000525078 KDM5DQ9BY66 1539 aa3.49□□□□□ -1.85
USP47-204ENST00000525078 BRWD3Q6RI45 1802 aa3.49□□□□□ -1.85
USP47-204ENST00000525078 PTPRJQ12913 1337 aa3.49□□□□□ -1.85
USP47-204ENST00000525078 OTOFQ9HC10 1997 aa3.49□□□□□ -1.85
USP47-204ENST00000525078 ZCCHC11Q5TAX3 1644 aaKnown RBP3.49□□□□□ -1.85
USP47-204ENST00000525078 TRAV36DV7A0A075B6V5 113 aa3.49□□□□□ -1.85
USP47-204ENST00000525078 GRIFINA4D1Z8 144 aa3.49□□□□□ -1.85
USP47-204ENST00000525078 TXNDC9O14530 226 aa3.49□□□□□ -1.85
USP47-204ENST00000525078 S100A1P23297 94 aa3.49□□□□□ -1.85
USP47-204ENST00000525078 NFYBP25208 207 aa3.49□□□□□ -1.85
USP47-204ENST00000525078 ZNF80P51504 273 aaPredicted RBP3.49□□□□□ -1.85
USP47-204ENST00000525078 FXYD7P58549 80 aa3.49□□□□□ -1.85
USP47-204ENST00000525078 DSCR10P59022 87 aa3.49□□□□□ -1.85
USP47-204ENST00000525078 ZNF816Q0VGE8 651 aaPredicted RBP3.49□□□□□ -1.85
USP47-204ENST00000525078 RPL13AP3Q6NVV1 102 aa3.49□□□□□ -1.85
USP47-204ENST00000525078 ZNF322Q6U7Q0 402 aaPredicted RBP3.49□□□□□ -1.85
USP47-204ENST00000525078 ZFP2Q6ZN57 461 aa3.49□□□□□ -1.85
USP47-204ENST00000525078 IFT20Q8IY31 132 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms