RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 NBR2O15453 112 aa9.19□□□□□ -0.94
HDLBP-245ENST00000494862 SOX15O60248 233 aa9.19□□□□□ -0.94
HDLBP-245ENST00000494862 NDUFA3O95167 84 aa9.19□□□□□ -0.94
HDLBP-245ENST00000494862 MBP02144 154 aa9.19□□□□□ -0.94
HDLBP-245ENST00000494862 SNRNP70P08621 437 aaKnown RBP9.19□□□□□ -0.94
HDLBP-245ENST00000494862 H2AFB1P0C5Y9 115 aa9.19□□□□□ -0.94
HDLBP-245ENST00000494862 ZP3P21754 424 aa9.19□□□□□ -0.94
HDLBP-245ENST00000494862 COMPP49747 757 aaPredicted RBP9.19□□□□□ -0.94
HDLBP-245ENST00000494862 SUB1P53999 127 aaKnown RBP eCLIP9.19□□□□□ -0.94
HDLBP-245ENST00000494862 KRTAP10-9P60411 292 aa9.19□□□□□ -0.94
HDLBP-245ENST00000494862 MMDQ15546 238 aa9.19□□□□□ -0.94
HDLBP-245ENST00000494862 TNXAQ16473 311 aa9.19□□□□□ -0.94
HDLBP-245ENST00000494862 TMEM41BQ5BJD5 291 aa9.19□□□□□ -0.94
HDLBP-245ENST00000494862 LRRC75A-AS1Q8N1F1 130 aa9.19□□□□□ -0.94
HDLBP-245ENST00000494862 Q8N6K4 173 aa9.19□□□□□ -0.94
HDLBP-245ENST00000494862 LFNGQ8NES3 379 aa9.19□□□□□ -0.94
HDLBP-245ENST00000494862 AJUBAQ96IF1 538 aa9.19□□□□□ -0.94
HDLBP-245ENST00000494862 SRSF8Q9BRL6 282 aaKnown RBP9.19□□□□□ -0.94
HDLBP-245ENST00000494862 NPCDR1Q9BY65 106 aa9.19□□□□□ -0.94
HDLBP-245ENST00000494862 NPVFQ9HCQ7 196 aa9.19□□□□□ -0.94
HDLBP-245ENST00000494862 RPRMQ9NS64 109 aa9.19□□□□□ -0.94
HDLBP-245ENST00000494862 KIAA1456Q9P272 454 aa9.19□□□□□ -0.94
HDLBP-245ENST00000494862 TET2Q6N021 2002 aaPredicted RBP9.19□□□□□ -0.94
HDLBP-245ENST00000494862 TRAV20A0A0B4J274 112 aa9.18□□□□□ -0.94
HDLBP-245ENST00000494862 CENPVL3A0A0U1RRI6 287 aa9.18□□□□□ -0.94
HDLBP-245ENST00000494862 B4DSR2 109 aa9.18□□□□□ -0.94
HDLBP-245ENST00000494862 HBE1P02100 147 aa9.18□□□□□ -0.94
HDLBP-245ENST00000494862 MSMBP08118 114 aa9.18□□□□□ -0.94
HDLBP-245ENST00000494862 OR13C7P0DN81 318 aa9.18□□□□□ -0.94
HDLBP-245ENST00000494862 SAA4P35542 130 aa9.18□□□□□ -0.94
HDLBP-245ENST00000494862 GPX4P36969 197 aaPredicted RBP9.18□□□□□ -0.94
HDLBP-245ENST00000494862 RAB2AP61019 212 aa9.18□□□□□ -0.94
HDLBP-245ENST00000494862 WT1-ASQ06250 92 aa9.18□□□□□ -0.94
HDLBP-245ENST00000494862 HES1Q14469 280 aa9.18□□□□□ -0.94
HDLBP-245ENST00000494862 PLGLAQ15195 96 aa9.18□□□□□ -0.94
HDLBP-245ENST00000494862 DEFB113Q30KQ7 82 aa9.18□□□□□ -0.94
HDLBP-245ENST00000494862 ARSJQ5FYB0 599 aaPredicted RBP9.18□□□□□ -0.94
HDLBP-245ENST00000494862 LRRK2Q5S007 2527 aa9.18□□□□□ -0.94
HDLBP-245ENST00000494862 SPSB3Q6PJ21 355 aa9.18□□□□□ -0.94
HDLBP-245ENST00000494862 TREML4Q6UXN2 200 aa9.18□□□□□ -0.94
HDLBP-245ENST00000494862 BPIFCQ8NFQ6 507 aa9.18□□□□□ -0.94
HDLBP-245ENST00000494862 RNASEH2CQ8TDP1 164 aaKnown RBP9.18□□□□□ -0.94
HDLBP-245ENST00000494862 C17orf50Q8WW18 174 aa9.18□□□□□ -0.94
HDLBP-245ENST00000494862 LINC00052Q96N35 136 aa9.18□□□□□ -0.94
HDLBP-245ENST00000494862 LSM4Q9Y4Z0 139 aaKnown RBP9.18□□□□□ -0.94
HDLBP-245ENST00000494862 LRBAP50851 2863 aa9.18□□□□□ -0.94
HDLBP-245ENST00000494862 A0A096LNT2 108 aa9.17□□□□□ -0.94
HDLBP-245ENST00000494862 TRAV1-1A0A0B4J248 108 aa9.17□□□□□ -0.94
HDLBP-245ENST00000494862 IGHV1-69DA0A0B4J2H0 117 aa9.17□□□□□ -0.94
HDLBP-245ENST00000494862 IGLC7A0M8Q6 106 aa9.17□□□□□ -0.94
HDLBP-245ENST00000494862 AGPAT2O15120 278 aa9.17□□□□□ -0.94
HDLBP-245ENST00000494862 IGHV1-69P01742 117 aa9.17□□□□□ -0.94
HDLBP-245ENST00000494862 PAX6P26367 422 aa9.17□□□□□ -0.94
HDLBP-245ENST00000494862 BRS3P32247 399 aa9.17□□□□□ -0.94
HDLBP-245ENST00000494862 OPRK1P41145 380 aa9.17□□□□□ -0.94
HDLBP-245ENST00000494862 ELLP55199 621 aaPredicted RBP9.17□□□□□ -0.94
HDLBP-245ENST00000494862 GNB1P62873 340 aa9.17□□□□□ -0.94
HDLBP-245ENST00000494862 CD69Q07108 199 aa9.17□□□□□ -0.94
HDLBP-245ENST00000494862 RAB31Q13636 194 aa9.17□□□□□ -0.94
HDLBP-245ENST00000494862 HNF4GQ14541 408 aa9.17□□□□□ -0.94
HDLBP-245ENST00000494862 C5orf64Q2M2E5 130 aa9.17□□□□□ -0.94
HDLBP-245ENST00000494862 FFAR4Q5NUL3 377 aa9.17□□□□□ -0.94
HDLBP-245ENST00000494862 PVRIGQ6DKI7 326 aa9.17□□□□□ -0.94
HDLBP-245ENST00000494862 ACSM6Q6P461 480 aa9.17□□□□□ -0.94
HDLBP-245ENST00000494862 ZNF114Q8NC26 417 aa9.17□□□□□ -0.94
HDLBP-245ENST00000494862 MBD3L1Q8WWY6 194 aa9.17□□□□□ -0.94
HDLBP-245ENST00000494862 CACNG8Q8WXS5 425 aa9.17□□□□□ -0.94
HDLBP-245ENST00000494862 P2RX4Q99571 388 aa9.17□□□□□ -0.94
HDLBP-245ENST00000494862 VSIRQ9H7M9 311 aa9.17□□□□□ -0.94
HDLBP-245ENST00000494862 KCNIP2Q9NS61 270 aa9.17□□□□□ -0.94
HDLBP-245ENST00000494862 TEP1Q99973 2627 aaKnown RBP9.16□□□□□ -0.94
HDLBP-245ENST00000494862 TMEM218A2RU14 115 aa9.16□□□□□ -0.94
HDLBP-245ENST00000494862 TEX22C9J3V5 150 aa9.16□□□□□ -0.94
HDLBP-245ENST00000494862 FCN1O00602 326 aa9.16□□□□□ -0.94
HDLBP-245ENST00000494862 CD5P06127 495 aa9.16□□□□□ -0.94
HDLBP-245ENST00000494862 FAM106CPP0CH98 169 aa9.16□□□□□ -0.94
HDLBP-245ENST00000494862 TMEM11P17152 192 aa9.16□□□□□ -0.94
HDLBP-245ENST00000494862 GATA3P23771 443 aa9.16□□□□□ -0.94
HDLBP-245ENST00000494862 CD24P25063 80 aa9.16□□□□□ -0.94
HDLBP-245ENST00000494862 SSBP2P81877 361 aaPredicted RBP9.16□□□□□ -0.94
HDLBP-245ENST00000494862 AKR1C1Q04828 323 aa9.16□□□□□ -0.94
HDLBP-245ENST00000494862 ACOT6Q3I5F7 207 aaPredicted RBP9.16□□□□□ -0.94
HDLBP-245ENST00000494862 TEPPQ6URK8 271 aa9.16□□□□□ -0.94
HDLBP-245ENST00000494862 TMEM144Q7Z5S9 345 aa9.16□□□□□ -0.94
HDLBP-245ENST00000494862 LINC01356Q8N9X3 169 aa9.16□□□□□ -0.94
HDLBP-245ENST00000494862 SFT2D1Q8WV19 159 aa9.16□□□□□ -0.94
HDLBP-245ENST00000494862 SRSF12Q8WXF0 261 aaKnown RBP9.16□□□□□ -0.94
HDLBP-245ENST00000494862 MBD6Q96DN6 1003 aa9.16□□□□□ -0.94
HDLBP-245ENST00000494862 PSMG3-AS1Q96PY0 264 aa9.16□□□□□ -0.94
HDLBP-245ENST00000494862 MGST2Q99735 147 aa9.16□□□□□ -0.94
HDLBP-245ENST00000494862 GGTLC1Q9BX51 225 aa9.16□□□□□ -0.94
HDLBP-245ENST00000494862 TREM1Q9NP99 234 aa9.16□□□□□ -0.94
HDLBP-245ENST00000494862 C1RLQ9NZP8 487 aa9.16□□□□□ -0.94
HDLBP-245ENST00000494862 MYO9AB2RTY4 2548 aa9.16□□□□□ -0.94
HDLBP-245ENST00000494862 TNCP24821 2201 aa9.15□□□□□ -0.94
HDLBP-245ENST00000494862 TSPAN9O75954 239 aa9.15□□□□□ -0.94
HDLBP-245ENST00000494862 CNIH1O95406 144 aa9.15□□□□□ -0.94
HDLBP-245ENST00000494862 SRSF3P84103 164 aaKnown RBP9.15□□□□□ -0.94
HDLBP-245ENST00000494862 LOXL1Q08397 574 aaPredicted RBP9.15□□□□□ -0.94
HDLBP-245ENST00000494862 PEA15Q15121 130 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms