RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 TMEM11P17152 192 aa20.7■□□□□ 0.9
U2AF1-208ENST00000471250 FHITP49789 147 aa20.7■□□□□ 0.9
U2AF1-208ENST00000471250 C5orf64Q2M2E5 130 aa20.7■□□□□ 0.9
U2AF1-208ENST00000471250 EIF4E3Q8N5X7 224 aaKnown RBP20.7■□□□□ 0.9
U2AF1-208ENST00000471250 LYPD6BQ8NI32 183 aa20.7■□□□□ 0.9
U2AF1-208ENST00000471250 SUB1P53999 127 aaKnown RBP eCLIP20.69■□□□□ 0.9
U2AF1-208ENST00000471250 FAM120AOSQ5T036 256 aa20.69■□□□□ 0.9
U2AF1-208ENST00000471250 DPPA3Q6W0C5 159 aa20.69■□□□□ 0.9
U2AF1-208ENST00000471250 FAM213BQ8TBF2 198 aa20.69■□□□□ 0.9
U2AF1-208ENST00000471250 MARC2Q969Z3 335 aa20.69■□□□□ 0.9
U2AF1-208ENST00000471250 HRH4Q9H3N8 390 aa20.69■□□□□ 0.9
U2AF1-208ENST00000471250 ANKRD17O75179 2603 aaKnown RBP20.68■□□□□ 0.9
U2AF1-208ENST00000471250 NUDT19A8MXV4 375 aa20.68■□□□□ 0.9
U2AF1-208ENST00000471250 ARSJQ5FYB0 599 aaPredicted RBP20.68■□□□□ 0.9
U2AF1-208ENST00000471250 TREML4Q6UXN2 200 aa20.68■□□□□ 0.9
U2AF1-208ENST00000471250 KRTAP1-3Q8IUG1 177 aa20.68■□□□□ 0.9
U2AF1-208ENST00000471250 SRSF12Q8WXF0 261 aaKnown RBP20.68■□□□□ 0.9
U2AF1-208ENST00000471250 P2RX4Q99571 388 aa20.68■□□□□ 0.9
U2AF1-208ENST00000471250 NPCDR1Q9BY65 106 aa20.68■□□□□ 0.9
U2AF1-208ENST00000471250 NPVFQ9HCQ7 196 aa20.68■□□□□ 0.9
U2AF1-208ENST00000471250 SMCO3A2RU48 225 aa20.67■□□□□ 0.9
U2AF1-208ENST00000471250 ANKRD34BA5PLL1 514 aa20.67■□□□□ 0.9
U2AF1-208ENST00000471250 TEX22C9J3V5 150 aa20.67■□□□□ 0.9
U2AF1-208ENST00000471250 MPDU1O75352 247 aa20.67■□□□□ 0.9
U2AF1-208ENST00000471250 IGHV4-38-2P0DP08 117 aa20.67■□□□□ 0.9
U2AF1-208ENST00000471250 ZNF616Q08AN1 781 aa20.67■□□□□ 0.9
U2AF1-208ENST00000471250 IL34Q6ZMJ4 242 aa20.67■□□□□ 0.9
U2AF1-208ENST00000471250 SRSF8Q9BRL6 282 aaKnown RBP20.67■□□□□ 0.9
U2AF1-208ENST00000471250 RAB19A4D1S5 217 aa20.66■□□□□ 0.9
U2AF1-208ENST00000471250 BRD3OSQ6XYD6 125 aa20.66■□□□□ 0.9
U2AF1-208ENST00000471250 ZNF114Q8NC26 417 aa20.66■□□□□ 0.9
U2AF1-208ENST00000471250 MEGF9Q9H1U4 602 aa20.66■□□□□ 0.9
U2AF1-208ENST00000471250 C1RLQ9NZP8 487 aa20.66■□□□□ 0.9
U2AF1-208ENST00000471250 PTPN13Q12923 2485 aa20.65■□□□□ 0.9
U2AF1-208ENST00000471250 PLXNB1O43157 2135 aa20.65■□□□□ 0.9
U2AF1-208ENST00000471250 NCBP2LA6PVI3 153 aaKnown RBP20.65■□□□□ 0.9
U2AF1-208ENST00000471250 C17orf112F2Z3M2 114 aa20.65■□□□□ 0.9
U2AF1-208ENST00000471250 J3QLI3 93 aa20.65■□□□□ 0.9
U2AF1-208ENST00000471250 AREGP15514 252 aa20.65■□□□□ 0.9
U2AF1-208ENST00000471250 PVRIGQ6DKI7 326 aa20.65■□□□□ 0.9
U2AF1-208ENST00000471250 ZNF709Q8N972 641 aa20.65■□□□□ 0.9
U2AF1-208ENST00000471250 MAPK1IP1LQ8NDC0 245 aa20.65■□□□□ 0.9
U2AF1-208ENST00000471250 RNASEH2CQ8TDP1 164 aaKnown RBP20.65■□□□□ 0.9
U2AF1-208ENST00000471250 Q96MF0 132 aa20.65■□□□□ 0.9
U2AF1-208ENST00000471250 ASH1LQ9NR48 2969 aaKnown RBP20.65■□□□□ 0.9
U2AF1-208ENST00000471250 CNIH1O95406 144 aa20.64■□□□□ 0.9
U2AF1-208ENST00000471250 AVPP01185 164 aa20.64■□□□□ 0.9
U2AF1-208ENST00000471250 REG1AP05451 166 aa20.64■□□□□ 0.9
U2AF1-208ENST00000471250 GPX4P36969 197 aaPredicted RBP20.64■□□□□ 0.9
U2AF1-208ENST00000471250 CD69Q07108 199 aa20.64■□□□□ 0.9
U2AF1-208ENST00000471250 KLF17Q5JT82 389 aaPredicted RBP20.64■□□□□ 0.9
U2AF1-208ENST00000471250 VSIRQ9H7M9 311 aa20.64■□□□□ 0.9
U2AF1-208ENST00000471250 LSM4Q9Y4Z0 139 aaKnown RBP20.64■□□□□ 0.9
U2AF1-208ENST00000471250 CELSR2Q9HCU4 2923 aa20.64■□□□□ 0.89
U2AF1-208ENST00000471250 IGHV4-31P0DP07 118 aa20.64■□□□□ 0.89
U2AF1-208ENST00000471250 CACNG8Q8WXS5 425 aa20.64■□□□□ 0.89
U2AF1-208ENST00000471250 RPRMQ9NS64 109 aa20.64■□□□□ 0.89
U2AF1-208ENST00000471250 A0A0U1RQK1 487 aa20.63■□□□□ 0.89
U2AF1-208ENST00000471250 TGFAP01135 160 aa20.63■□□□□ 0.89
U2AF1-208ENST00000471250 FXYD3Q14802 87 aa20.63■□□□□ 0.89
U2AF1-208ENST00000471250 TMEM41BQ5BJD5 291 aa20.63■□□□□ 0.89
U2AF1-208ENST00000471250 ZNF562Q6V9R5 426 aa20.63■□□□□ 0.89
U2AF1-208ENST00000471250 Q8N9W7 124 aa20.63■□□□□ 0.89
U2AF1-208ENST00000471250 CR1P17927 2039 aa20.62■□□□□ 0.89
U2AF1-208ENST00000471250 I3L521 148 aa20.62■□□□□ 0.89
U2AF1-208ENST00000471250 TSPAN15O95858 294 aa20.62■□□□□ 0.89
U2AF1-208ENST00000471250 ELLP55199 621 aaPredicted RBP20.62■□□□□ 0.89
U2AF1-208ENST00000471250 ACSM6Q6P461 480 aa20.62■□□□□ 0.89
U2AF1-208ENST00000471250 SSMEM1Q8WWF3 244 aa20.62■□□□□ 0.89
U2AF1-208ENST00000471250 MGST2Q99735 147 aa20.62■□□□□ 0.89
U2AF1-208ENST00000471250 AKR1C1Q04828 323 aa20.61■□□□□ 0.89
U2AF1-208ENST00000471250 TMEM249Q2WGJ8 235 aa20.61■□□□□ 0.89
U2AF1-208ENST00000471250 TEPPQ6URK8 271 aa20.61■□□□□ 0.89
U2AF1-208ENST00000471250 TMEM144Q7Z5S9 345 aa20.61■□□□□ 0.89
U2AF1-208ENST00000471250 SOX15O60248 233 aa20.61■□□□□ 0.89
U2AF1-208ENST00000471250 MBP02144 154 aa20.61■□□□□ 0.89
U2AF1-208ENST00000471250 H2AFB1P0C5Y9 115 aa20.61■□□□□ 0.89
U2AF1-208ENST00000471250 GAMTQ14353 236 aa20.61■□□□□ 0.89
U2AF1-208ENST00000471250 MLANAQ16655 118 aa20.61■□□□□ 0.89
U2AF1-208ENST00000471250 FFAR4Q5NUL3 377 aa20.61■□□□□ 0.89
U2AF1-208ENST00000471250 UQCC3Q6UW78 93 aa20.61■□□□□ 0.89
U2AF1-208ENST00000471250 SLC16A13Q7RTY0 426 aa20.61■□□□□ 0.89
U2AF1-208ENST00000471250 COMMD1Q8N668 190 aa20.61■□□□□ 0.89
U2AF1-208ENST00000471250 OR1P1Q8NH06 330 aa20.61■□□□□ 0.89
U2AF1-208ENST00000471250 F11RQ9Y624 299 aaKnown RBP20.61■□□□□ 0.89
U2AF1-208ENST00000471250 APELAP0DMC3 54 aa20.6■□□□□ 0.89
U2AF1-208ENST00000471250 OPRK1P41145 380 aa20.6■□□□□ 0.89
U2AF1-208ENST00000471250 CX3CL1P78423 397 aa20.6■□□□□ 0.89
U2AF1-208ENST00000471250 ABHD5Q8WTS1 349 aa20.6■□□□□ 0.89
U2AF1-208ENST00000471250 GGTLC1Q9BX51 225 aa20.6■□□□□ 0.89
U2AF1-208ENST00000471250 MFAP2P55001 183 aa20.59■□□□□ 0.89
U2AF1-208ENST00000471250 TOR2AQ5JU69 321 aa20.59■□□□□ 0.89
U2AF1-208ENST00000471250 FNDC4Q9H6D8 234 aaPredicted RBP20.59■□□□□ 0.89
U2AF1-208ENST00000471250 FAM96BQ9Y3D0 163 aa20.59■□□□□ 0.89
U2AF1-208ENST00000471250 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.58■□□□□ 0.896e-8■■■□□ 16.7
U2AF1-208ENST00000471250 SPSB3Q6PJ21 355 aa20.58■□□□□ 0.89
U2AF1-208ENST00000471250 PIFOQ8TCI5 191 aa20.58■□□□□ 0.89
U2AF1-208ENST00000471250 SLC35E1Q96K37 410 aa20.58■□□□□ 0.89
U2AF1-208ENST00000471250 POLQO75417 2590 aa20.58■□□□□ 0.88
U2AF1-208ENST00000471250 RAB2AP61019 212 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms