RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 PEF1Q9UBV8 284 aaKnown RBP12.18□□□□□ -0.46
BRAT1-202ENST00000421712 CACNG5Q9UF02 275 aa12.18□□□□□ -0.46
BRAT1-202ENST00000421712 A0A0B4J2A0 478 aa12.17□□□□□ -0.46
BRAT1-202ENST00000421712 FAM240BA0A1B0GVZ2 78 aa12.17□□□□□ -0.46
BRAT1-202ENST00000421712 G3V4G9 280 aa12.17□□□□□ -0.46
BRAT1-202ENST00000421712 UPK1BO75841 260 aa12.17□□□□□ -0.46
BRAT1-202ENST00000421712 NDUFB8O95169 186 aa12.17□□□□□ -0.46
BRAT1-202ENST00000421712 IGHV3-23P01764 117 aa12.17□□□□□ -0.46
BRAT1-202ENST00000421712 ANXA7P20073 488 aaKnown RBP12.17□□□□□ -0.46
BRAT1-202ENST00000421712 SLURP1P55000 103 aa12.17□□□□□ -0.46
BRAT1-202ENST00000421712 UBE2MP61081 183 aaKnown RBP12.17□□□□□ -0.46
BRAT1-202ENST00000421712 C4orf46Q504U0 113 aa12.17□□□□□ -0.46
BRAT1-202ENST00000421712 ZNF343Q6P1L6 599 aa12.17□□□□□ -0.46
BRAT1-202ENST00000421712 Q6ZRM9 215 aa12.17□□□□□ -0.46
BRAT1-202ENST00000421712 RCC1LQ96I51 464 aaKnown RBP12.17□□□□□ -0.46
BRAT1-202ENST00000421712 SHPKQ9UHJ6 478 aa12.17□□□□□ -0.46
BRAT1-202ENST00000421712 S4R3C0 116 aa12.17□□□□□ -0.46
BRAT1-202ENST00000421712 VWFP04275 2813 aa12.17□□□□□ -0.46
BRAT1-202ENST00000421712 NXPH3O95157 252 aa12.16□□□□□ -0.46
BRAT1-202ENST00000421712 DUS4LO95620 317 aaKnown RBP12.16□□□□□ -0.46
BRAT1-202ENST00000421712 HLA-AP01891 365 aaKnown RBP12.16□□□□□ -0.46
BRAT1-202ENST00000421712 SULT1A3P0DMM9 295 aa12.16□□□□□ -0.46
BRAT1-202ENST00000421712 SULT1A4P0DMN0 295 aa12.16□□□□□ -0.46
BRAT1-202ENST00000421712 HOXA1P49639 335 aaPredicted RBP12.16□□□□□ -0.46
BRAT1-202ENST00000421712 FHL3Q13643 280 aa12.16□□□□□ -0.46
BRAT1-202ENST00000421712 EEF1AKMT3Q96AZ1 226 aa12.16□□□□□ -0.46
BRAT1-202ENST00000421712 MCRIP2Q9BUT9 160 aaKnown RBP12.16□□□□□ -0.46
BRAT1-202ENST00000421712 F11RQ9Y624 299 aaKnown RBP12.16□□□□□ -0.46
BRAT1-202ENST00000421712 PKD1L1Q8TDX9 2849 aa12.15□□□□□ -0.46
BRAT1-202ENST00000421712 IGLV11-55A0A075B6I3 123 aa12.15□□□□□ -0.46
BRAT1-202ENST00000421712 TRAV6A0A075B6T7 132 aa12.15□□□□□ -0.46
BRAT1-202ENST00000421712 C9orf170A2RU37 121 aa12.15□□□□□ -0.46
BRAT1-202ENST00000421712 TCRBP04435 133 aa12.15□□□□□ -0.46
BRAT1-202ENST00000421712 OR4E1P0C645 316 aa12.15□□□□□ -0.46
BRAT1-202ENST00000421712 ZP3P21754 424 aa12.15□□□□□ -0.46
BRAT1-202ENST00000421712 SNCAP37840 140 aa12.15□□□□□ -0.46
BRAT1-202ENST00000421712 SPCS3P61009 180 aa12.15□□□□□ -0.46
BRAT1-202ENST00000421712 ANKRD55Q3KP44 614 aa12.15□□□□□ -0.46
BRAT1-202ENST00000421712 OR2C3Q8N628 320 aa12.15□□□□□ -0.46
BRAT1-202ENST00000421712 OR1L6Q8NGR2 347 aa12.15□□□□□ -0.46
BRAT1-202ENST00000421712 DCUN1D4Q92564 292 aa12.15□□□□□ -0.46
BRAT1-202ENST00000421712 CXorf58Q96LI9 332 aa12.15□□□□□ -0.46
BRAT1-202ENST00000421712 C20orf85Q9H1P6 137 aa12.15□□□□□ -0.46
BRAT1-202ENST00000421712 MGAM2Q2M2H8 2515 aa12.15□□□□□ -0.46
BRAT1-202ENST00000421712 NOTCH3Q9UM47 2321 aa12.14□□□□□ -0.47
BRAT1-202ENST00000421712 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.14□□□□□ -0.47
BRAT1-202ENST00000421712 DUXBA0A1W2PPF3 345 aa12.14□□□□□ -0.47
BRAT1-202ENST00000421712 CEBPZOSA8MTT3 80 aa12.14□□□□□ -0.47
BRAT1-202ENST00000421712 OVOL1O14753 267 aa12.14□□□□□ -0.47
BRAT1-202ENST00000421712 TRBV12-3P01733 135 aa12.14□□□□□ -0.47
BRAT1-202ENST00000421712 HOXB5P09067 269 aa12.14□□□□□ -0.47
BRAT1-202ENST00000421712 SMCO1Q147U7 214 aa12.14□□□□□ -0.47
BRAT1-202ENST00000421712 RPEL1Q2QD12 228 aa12.14□□□□□ -0.47
BRAT1-202ENST00000421712 CLEC19AQ6UXS0 136 aa12.14□□□□□ -0.47
BRAT1-202ENST00000421712 OR1S1Q8NH92 325 aa12.14□□□□□ -0.47
BRAT1-202ENST00000421712 COQ8AQ8NI60 647 aa12.14□□□□□ -0.47
BRAT1-202ENST00000421712 DLX4Q92988 240 aaPredicted RBP12.14□□□□□ -0.47
BRAT1-202ENST00000421712 MISP3Q96FF7 219 aa12.14□□□□□ -0.47
BRAT1-202ENST00000421712 GPR61Q9BZJ8 451 aa12.14□□□□□ -0.47
BRAT1-202ENST00000421712 CACFD1Q9UGQ2 172 aa12.14□□□□□ -0.47
BRAT1-202ENST00000421712 TBC1D24Q9ULP9 559 aa12.14□□□□□ -0.47
BRAT1-202ENST00000421712 NBEAL1Q6ZS30 2694 aa12.14□□□□□ -0.47
BRAT1-202ENST00000421712 CMYA5Q8N3K9 4069 aa12.14□□□□□ -0.47
BRAT1-202ENST00000421712 TRBV7-1A0A0A6YYK4 115 aa12.13□□□□□ -0.47
BRAT1-202ENST00000421712 IGHV3-21A0A0B4J1V1 117 aa12.13□□□□□ -0.47
BRAT1-202ENST00000421712 SEC14L6B5MCN3 397 aa12.13□□□□□ -0.47
BRAT1-202ENST00000421712 HOXD3P31249 432 aaPredicted RBP12.13□□□□□ -0.47
BRAT1-202ENST00000421712 SUB1P53999 127 aaKnown RBP eCLIP12.13□□□□□ -0.47
BRAT1-202ENST00000421712 DHRS2Q13268 280 aa12.13□□□□□ -0.47
BRAT1-202ENST00000421712 ASAH1Q13510 395 aa12.13□□□□□ -0.47
BRAT1-202ENST00000421712 TATDN3Q17R31 274 aa12.13□□□□□ -0.47
BRAT1-202ENST00000421712 NMSQ5H8A3 153 aa12.13□□□□□ -0.47
BRAT1-202ENST00000421712 FAM209BQ5JX69 171 aa12.13□□□□□ -0.47
BRAT1-202ENST00000421712 SAMD5Q5TGI4 173 aa12.13□□□□□ -0.47
BRAT1-202ENST00000421712 LYG2Q86SG7 212 aa12.13□□□□□ -0.47
BRAT1-202ENST00000421712 LRTM2Q8N967 370 aa12.13□□□□□ -0.47
BRAT1-202ENST00000421712 OR1P1Q8NH06 330 aa12.13□□□□□ -0.47
BRAT1-202ENST00000421712 OR52E5Q8NH55 327 aa12.13□□□□□ -0.47
BRAT1-202ENST00000421712 ENKURQ8TC29 256 aa12.13□□□□□ -0.47
BRAT1-202ENST00000421712 NUDT15Q9NV35 164 aa12.13□□□□□ -0.47
BRAT1-202ENST00000421712 DMRT1Q9Y5R6 373 aa12.13□□□□□ -0.47
BRAT1-202ENST00000421712 A0A1B0GU03 582 aa12.12□□□□□ -0.47
BRAT1-202ENST00000421712 MFSD2BA6NFX1 497 aa12.12□□□□□ -0.47
BRAT1-202ENST00000421712 PPP5D1E7EU14 171 aa12.12□□□□□ -0.47
BRAT1-202ENST00000421712 H2AFB2P0C5Z0 115 aa12.12□□□□□ -0.47
BRAT1-202ENST00000421712 KLK9Q2XQG4 91 aa12.12□□□□□ -0.47
BRAT1-202ENST00000421712 PINX1Q96BK5 328 aaKnown RBP12.12□□□□□ -0.47
BRAT1-202ENST00000421712 HEYLQ9NQ87 328 aaPredicted RBP12.12□□□□□ -0.47
BRAT1-202ENST00000421712 KLK9Q9UKQ9 250 aa12.12□□□□□ -0.47
BRAT1-202ENST00000421712 TMED3Q9Y3Q3 217 aa12.12□□□□□ -0.47
BRAT1-202ENST00000421712 IFNA21P01568 189 aa12.11□□□□□ -0.47
BRAT1-202ENST00000421712 CLEC3BP05452 202 aa12.11□□□□□ -0.47
BRAT1-202ENST00000421712 ARL3P36405 182 aa12.11□□□□□ -0.47
BRAT1-202ENST00000421712 MFAP2P55001 183 aa12.11□□□□□ -0.47
BRAT1-202ENST00000421712 SYNJ2BPP57105 145 aa12.11□□□□□ -0.47
BRAT1-202ENST00000421712 DEFA1P59665 94 aa12.11□□□□□ -0.47
BRAT1-202ENST00000421712 DEFA3P59666 94 aa12.11□□□□□ -0.47
BRAT1-202ENST00000421712 DEFA6Q01524 100 aa12.11□□□□□ -0.47
BRAT1-202ENST00000421712 IFITM3Q01628 133 aa12.11□□□□□ -0.47
BRAT1-202ENST00000421712 C9orf66Q5T8R8 295 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms