RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 BCAP31P51572 246 aa4.43□□□□□ -1.7
LINC00396-201ENST00000411690 PSMD7P51665 324 aa4.43□□□□□ -1.7
LINC00396-201ENST00000411690 HAMPP81172 84 aa4.43□□□□□ -1.7
LINC00396-201ENST00000411690 OXA1LQ15070 435 aa4.43□□□□□ -1.7
LINC00396-201ENST00000411690 NEDD8Q15843 81 aa4.43□□□□□ -1.7
LINC00396-201ENST00000411690 UBE2UQ5VVX9 321 aa4.43□□□□□ -1.7
LINC00396-201ENST00000411690 FAM90A2PQ658T7 463 aa4.43□□□□□ -1.7
LINC00396-201ENST00000411690 ZNF880Q6PDB4 577 aa4.43□□□□□ -1.7
LINC00396-201ENST00000411690 TCF24Q7RTU0 167 aa4.43□□□□□ -1.7
LINC00396-201ENST00000411690 ZBTB8BQ8NAP8 495 aaPredicted RBP4.43□□□□□ -1.7
LINC00396-201ENST00000411690 TMEM116Q8NCL8 245 aa4.43□□□□□ -1.7
LINC00396-201ENST00000411690 OSR1Q8TAX0 266 aaPredicted RBP4.43□□□□□ -1.7
LINC00396-201ENST00000411690 YIPF6Q96EC8 236 aa4.43□□□□□ -1.7
LINC00396-201ENST00000411690 BSCL2Q96G97 398 aaPredicted RBP4.43□□□□□ -1.7
LINC00396-201ENST00000411690 DCUN1D5Q9BTE7 237 aa4.43□□□□□ -1.7
LINC00396-201ENST00000411690 FAAP24Q9BTP7 215 aa4.43□□□□□ -1.7
LINC00396-201ENST00000411690 FUNDC2Q9BWH2 189 aa4.43□□□□□ -1.7
LINC00396-201ENST00000411690 OR2D2Q9H210 308 aa4.43□□□□□ -1.7
LINC00396-201ENST00000411690 SDHAF2Q9NX18 166 aa4.43□□□□□ -1.7
LINC00396-201ENST00000411690 THYN1Q9P016 225 aa4.43□□□□□ -1.7
LINC00396-201ENST00000411690 DKK2Q9UBU2 259 aa4.43□□□□□ -1.7
LINC00396-201ENST00000411690 DIMT1Q9UNQ2 313 aaKnown RBP4.43□□□□□ -1.7
LINC00396-201ENST00000411690 IGHV3OR16-13A0A075B7E8 117 aa4.42□□□□□ -1.7
LINC00396-201ENST00000411690 IGHV3-74A0A0B4J1X5 117 aa4.42□□□□□ -1.7
LINC00396-201ENST00000411690 KNCNA6PVL3 124 aa4.42□□□□□ -1.7
LINC00396-201ENST00000411690 RGS10O43665 173 aa4.42□□□□□ -1.7
LINC00396-201ENST00000411690 OXTP01178 125 aa4.42□□□□□ -1.7
LINC00396-201ENST00000411690 CD5P06127 495 aa4.42□□□□□ -1.7
LINC00396-201ENST00000411690 ZNF735P0CB33 412 aa4.42□□□□□ -1.7
LINC00396-201ENST00000411690 UBBP0CG47 229 aa4.42□□□□□ -1.7
LINC00396-201ENST00000411690 LIMS3P0CW19 117 aa4.42□□□□□ -1.7
LINC00396-201ENST00000411690 LIMS4P0CW20 117 aa4.42□□□□□ -1.7
LINC00396-201ENST00000411690 GNB3P16520 340 aa4.42□□□□□ -1.7
LINC00396-201ENST00000411690 ZNF182P17025 639 aaPredicted RBP4.42□□□□□ -1.7
LINC00396-201ENST00000411690 GABRB1P18505 474 aa4.42□□□□□ -1.7
LINC00396-201ENST00000411690 RPL11P62913 178 aaKnown RBP4.42□□□□□ -1.7
LINC00396-201ENST00000411690 ST3GAL4Q11206 333 aa4.42□□□□□ -1.7
LINC00396-201ENST00000411690 TBCEQ15813 527 aaPredicted RBP4.42□□□□□ -1.7
LINC00396-201ENST00000411690 CTF1Q16619 201 aa4.42□□□□□ -1.7
LINC00396-201ENST00000411690 FAM222AQ5U5X8 452 aa4.42□□□□□ -1.7
LINC00396-201ENST00000411690 LAIR2Q6ISS4 152 aa4.42□□□□□ -1.7
LINC00396-201ENST00000411690 SPSB3Q6PJ21 355 aa4.42□□□□□ -1.7
LINC00396-201ENST00000411690 GSG1LQ6UXU4 331 aa4.42□□□□□ -1.7
LINC00396-201ENST00000411690 AHSA2Q719I0 299 aa4.42□□□□□ -1.7
LINC00396-201ENST00000411690 MOB1BQ7L9L4 216 aa4.42□□□□□ -1.7
LINC00396-201ENST00000411690 FAM24BQ8N5W8 94 aa4.42□□□□□ -1.7
LINC00396-201ENST00000411690 BPIFB6Q8NFQ5 453 aa4.42□□□□□ -1.7
LINC00396-201ENST00000411690 DYNC2LI1Q8TCX1 351 aa4.42□□□□□ -1.7
LINC00396-201ENST00000411690 ORAI1Q96D31 301 aa4.42□□□□□ -1.7
LINC00396-201ENST00000411690 SRSF8Q9BRL6 282 aaKnown RBP4.42□□□□□ -1.7
LINC00396-201ENST00000411690 C1QTNF4Q9BXJ3 329 aa4.42□□□□□ -1.7
LINC00396-201ENST00000411690 TMEM59Q9BXS4 323 aa4.42□□□□□ -1.7
LINC00396-201ENST00000411690 KRTAP1-5Q9BYS1 174 aa4.42□□□□□ -1.7
LINC00396-201ENST00000411690 OR51E2Q9H255 320 aa4.42□□□□□ -1.7
LINC00396-201ENST00000411690 MS4A6AQ9H2W1 248 aa4.42□□□□□ -1.7
LINC00396-201ENST00000411690 MRPS18AQ9NVS2 196 aaKnown RBP4.42□□□□□ -1.7
LINC00396-201ENST00000411690 FKBP14Q9NWM8 211 aa4.42□□□□□ -1.7
LINC00396-201ENST00000411690 RDH8Q9NYR8 311 aa4.42□□□□□ -1.7
LINC00396-201ENST00000411690 GHRLQ9UBU3 117 aa4.42□□□□□ -1.7
LINC00396-201ENST00000411690 CLEC2DQ9UHP7 191 aa4.42□□□□□ -1.7
LINC00396-201ENST00000411690 PAIP2BQ9ULR5 123 aaKnown RBP4.42□□□□□ -1.7
LINC00396-201ENST00000411690 LINC00588Q9Y4M8 146 aa4.42□□□□□ -1.7
LINC00396-201ENST00000411690 RNF213Q63HN8 5207 aa4.42□□□□□ -1.7
LINC00396-201ENST00000411690 TRAV8-7A0A075B6U6 113 aa4.41□□□□□ -1.7
LINC00396-201ENST00000411690 TRBV5-5A0A0J9YX44 114 aa4.41□□□□□ -1.7
LINC00396-201ENST00000411690 RPS10-NUDT3A0A1W2PQS6 291 aa4.41□□□□□ -1.7
LINC00396-201ENST00000411690 OGG1O15527 345 aa4.41□□□□□ -1.7
LINC00396-201ENST00000411690 NUDT3O95989 172 aa4.41□□□□□ -1.7
LINC00396-201ENST00000411690 NAPSAO96009 420 aa4.41□□□□□ -1.7
LINC00396-201ENST00000411690 PRB4P10163 310 aaPredicted RBP4.41□□□□□ -1.7
LINC00396-201ENST00000411690 PPP5CP53041 499 aa4.41□□□□□ -1.7
LINC00396-201ENST00000411690 WNT4P56705 351 aa4.41□□□□□ -1.7
LINC00396-201ENST00000411690 ERVFC1-1P60608 527 aa4.41□□□□□ -1.7
LINC00396-201ENST00000411690 NUTF2P61970 127 aaKnown RBP4.41□□□□□ -1.7
LINC00396-201ENST00000411690 HLA-DRB3P79483 266 aa4.41□□□□□ -1.7
LINC00396-201ENST00000411690 USF2Q15853 346 aaPredicted RBP4.41□□□□□ -1.7
LINC00396-201ENST00000411690 TRIM16LQ309B1 348 aa4.41□□□□□ -1.7
LINC00396-201ENST00000411690 TIMM50Q3ZCQ8 353 aa4.41□□□□□ -1.7
LINC00396-201ENST00000411690 ACTL10Q5JWF8 245 aa4.41□□□□□ -1.7
LINC00396-201ENST00000411690 SSX7Q7RTT5 188 aa4.41□□□□□ -1.7
LINC00396-201ENST00000411690 C6orf201Q7Z4U5 140 aa4.41□□□□□ -1.7
LINC00396-201ENST00000411690 CDH26Q8IXH8 852 aa4.41□□□□□ -1.7
LINC00396-201ENST00000411690 MS4A15Q8N5U1 240 aa4.41□□□□□ -1.7
LINC00396-201ENST00000411690 DUSP18Q8NEJ0 188 aa4.41□□□□□ -1.7
LINC00396-201ENST00000411690 OR6M1Q8NGM8 313 aa4.41□□□□□ -1.7
LINC00396-201ENST00000411690 VN1R17PQ8TDU5 208 aa4.41□□□□□ -1.7
LINC00396-201ENST00000411690 CHAC2Q8WUX2 184 aa4.41□□□□□ -1.7
LINC00396-201ENST00000411690 APH1BQ8WW43 257 aa4.41□□□□□ -1.7
LINC00396-201ENST00000411690 ADTRPQ96IZ2 230 aa4.41□□□□□ -1.7
LINC00396-201ENST00000411690 NEU1Q99519 415 aa4.41□□□□□ -1.7
LINC00396-201ENST00000411690 UQCC2Q9BRT2 126 aa4.41□□□□□ -1.7
LINC00396-201ENST00000411690 URM1Q9BTM9 101 aaKnown RBP4.41□□□□□ -1.7
LINC00396-201ENST00000411690 MND1Q9BWT6 205 aa4.41□□□□□ -1.7
LINC00396-201ENST00000411690 NXF2Q9GZY0 626 aaKnown RBP4.41□□□□□ -1.7
LINC00396-201ENST00000411690 NAA50Q9GZZ1 169 aaKnown RBP4.41□□□□□ -1.7
LINC00396-201ENST00000411690 Q9H3A6 140 aa4.41□□□□□ -1.7
LINC00396-201ENST00000411690 RIMS4Q9H426 269 aaPredicted RBP4.41□□□□□ -1.7
LINC00396-201ENST00000411690 ACOT13Q9NPJ3 140 aa4.41□□□□□ -1.7
LINC00396-201ENST00000411690 PLEKHJ1Q9NW61 149 aa4.41□□□□□ -1.7
LINC00396-201ENST00000411690 CCDC59Q9P031 241 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms