RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 GATA3P23771 443 aa10.62□□□□□ -0.71
CEACAM1-206ENST00000403136 BRS3P32247 399 aa10.62□□□□□ -0.71
CEACAM1-206ENST00000403136 LOXL1Q08397 574 aaPredicted RBP10.62□□□□□ -0.71
CEACAM1-206ENST00000403136 FBLN7Q53RD9 439 aa10.62□□□□□ -0.71
CEACAM1-206ENST00000403136 LINC01356Q8N9X3 169 aa10.62□□□□□ -0.71
CEACAM1-206ENST00000403136 FAM213BQ8TBF2 198 aa10.62□□□□□ -0.71
CEACAM1-206ENST00000403136 NPVFQ9HCQ7 196 aa10.62□□□□□ -0.71
CEACAM1-206ENST00000403136 NUDT19A8MXV4 375 aa10.61□□□□□ -0.71
CEACAM1-206ENST00000403136 SUB1P53999 127 aaKnown RBP eCLIP10.61□□□□□ -0.71
CEACAM1-206ENST00000403136 GNB1P62873 340 aa10.61□□□□□ -0.71
CEACAM1-206ENST00000403136 TREML4Q6UXN2 200 aa10.61□□□□□ -0.71
CEACAM1-206ENST00000403136 MRPL41Q8IXM3 137 aaKnown RBP10.61□□□□□ -0.71
CEACAM1-206ENST00000403136 PLXNB1O43157 2135 aa10.61□□□□□ -0.71
CEACAM1-206ENST00000403136 IGHV3OR16-10A0A075B7F0 116 aa10.6□□□□□ -0.71
CEACAM1-206ENST00000403136 IGLC7A0M8Q6 106 aa10.6□□□□□ -0.71
CEACAM1-206ENST00000403136 SMCO3A2RU48 225 aa10.6□□□□□ -0.71
CEACAM1-206ENST00000403136 RAB19A4D1S5 217 aa10.6□□□□□ -0.71
CEACAM1-206ENST00000403136 FNDC10F2Z333 226 aa10.6□□□□□ -0.71
CEACAM1-206ENST00000403136 TMEM11P17152 192 aa10.6□□□□□ -0.71
CEACAM1-206ENST00000403136 SSBP2P81877 361 aaPredicted RBP10.6□□□□□ -0.71
CEACAM1-206ENST00000403136 ZNF616Q08AN1 781 aa10.6□□□□□ -0.71
CEACAM1-206ENST00000403136 C5orf64Q2M2E5 130 aa10.6□□□□□ -0.71
CEACAM1-206ENST00000403136 ARSJQ5FYB0 599 aaPredicted RBP10.6□□□□□ -0.71
CEACAM1-206ENST00000403136 FAM120AOSQ5T036 256 aa10.6□□□□□ -0.71
CEACAM1-206ENST00000403136 PRSS57Q6UWY2 283 aa10.6□□□□□ -0.71
CEACAM1-206ENST00000403136 DPPA3Q6W0C5 159 aa10.6□□□□□ -0.71
CEACAM1-206ENST00000403136 IL34Q6ZMJ4 242 aa10.6□□□□□ -0.71
CEACAM1-206ENST00000403136 ZNF709Q8N972 641 aa10.6□□□□□ -0.71
CEACAM1-206ENST00000403136 P2RX4Q99571 388 aa10.6□□□□□ -0.71
CEACAM1-206ENST00000403136 NPCDR1Q9BY65 106 aa10.6□□□□□ -0.71
CEACAM1-206ENST00000403136 MAP1AP78559 2803 aaPredicted RBP10.6□□□□□ -0.71
CEACAM1-206ENST00000403136 TRAV40A0A0B4J280 105 aa10.6□□□□□ -0.71
CEACAM1-206ENST00000403136 NCBP2LA6PVI3 153 aaKnown RBP10.6□□□□□ -0.71
CEACAM1-206ENST00000403136 RNF223E7ERA6 249 aa10.6□□□□□ -0.71
CEACAM1-206ENST00000403136 I3L521 148 aa10.6□□□□□ -0.71
CEACAM1-206ENST00000403136 MPDU1O75352 247 aa10.6□□□□□ -0.71
CEACAM1-206ENST00000403136 CNIH1O95406 144 aa10.6□□□□□ -0.71
CEACAM1-206ENST00000403136 Q5PR19 223 aa10.6□□□□□ -0.71
CEACAM1-206ENST00000403136 RUSC1-AS1Q66K80 236 aa10.6□□□□□ -0.71
CEACAM1-206ENST00000403136 SRSF12Q8WXF0 261 aaKnown RBP10.6□□□□□ -0.71
CEACAM1-206ENST00000403136 RPRMQ9NS64 109 aa10.6□□□□□ -0.71
CEACAM1-206ENST00000403136 TEX22C9J3V5 150 aa10.59□□□□□ -0.71
CEACAM1-206ENST00000403136 C17orf112F2Z3M2 114 aa10.59□□□□□ -0.71
CEACAM1-206ENST00000403136 TSPAN15O95858 294 aa10.59□□□□□ -0.71
CEACAM1-206ENST00000403136 IGHV4-38-2P0DP08 117 aa10.59□□□□□ -0.71
CEACAM1-206ENST00000403136 GPX4P36969 197 aaPredicted RBP10.59□□□□□ -0.71
CEACAM1-206ENST00000403136 MLANAQ16655 118 aa10.59□□□□□ -0.71
CEACAM1-206ENST00000403136 RNASEH2CQ8TDP1 164 aaKnown RBP10.59□□□□□ -0.71
CEACAM1-206ENST00000403136 CACNG8Q8WXS5 425 aa10.59□□□□□ -0.71
CEACAM1-206ENST00000403136 VSIRQ9H7M9 311 aa10.59□□□□□ -0.71
CEACAM1-206ENST00000403136 AVPP01185 164 aa10.58□□□□□ -0.72
CEACAM1-206ENST00000403136 REG1AP05451 166 aa10.58□□□□□ -0.72
CEACAM1-206ENST00000403136 H2AFB1P0C5Y9 115 aa10.58□□□□□ -0.72
CEACAM1-206ENST00000403136 AREGP15514 252 aa10.58□□□□□ -0.72
CEACAM1-206ENST00000403136 CD69Q07108 199 aa10.58□□□□□ -0.72
CEACAM1-206ENST00000403136 FXYD3Q14802 87 aa10.58□□□□□ -0.72
CEACAM1-206ENST00000403136 PVRIGQ6DKI7 326 aa10.58□□□□□ -0.72
CEACAM1-206ENST00000403136 ZNF562Q6V9R5 426 aa10.58□□□□□ -0.72
CEACAM1-206ENST00000403136 BRD3OSQ6XYD6 125 aa10.58□□□□□ -0.72
CEACAM1-206ENST00000403136 MAPK1IP1LQ8NDC0 245 aa10.58□□□□□ -0.72
CEACAM1-206ENST00000403136 SRSF8Q9BRL6 282 aaKnown RBP10.58□□□□□ -0.72
CEACAM1-206ENST00000403136 MEGF9Q9H1U4 602 aa10.58□□□□□ -0.72
CEACAM1-206ENST00000403136 C1RLQ9NZP8 487 aa10.58□□□□□ -0.72
CEACAM1-206ENST00000403136 LSM4Q9Y4Z0 139 aaKnown RBP10.58□□□□□ -0.72
CEACAM1-206ENST00000403136 AGPAT2O15120 278 aa10.57□□□□□ -0.72
CEACAM1-206ENST00000403136 TGFAP01135 160 aa10.57□□□□□ -0.72
CEACAM1-206ENST00000403136 MBP02144 154 aa10.57□□□□□ -0.72
CEACAM1-206ENST00000403136 ELLP55199 621 aaPredicted RBP10.57□□□□□ -0.72
CEACAM1-206ENST00000403136 GAMTQ14353 236 aa10.57□□□□□ -0.72
CEACAM1-206ENST00000403136 TMEM41BQ5BJD5 291 aa10.57□□□□□ -0.72
CEACAM1-206ENST00000403136 ACSM6Q6P461 480 aa10.57□□□□□ -0.72
CEACAM1-206ENST00000403136 TEPPQ6URK8 271 aa10.57□□□□□ -0.72
CEACAM1-206ENST00000403136 UQCC3Q6UW78 93 aa10.57□□□□□ -0.72
CEACAM1-206ENST00000403136 ZNF114Q8NC26 417 aa10.57□□□□□ -0.72
CEACAM1-206ENST00000403136 SSMEM1Q8WWF3 244 aa10.57□□□□□ -0.72
CEACAM1-206ENST00000403136 CSMD2Q7Z408 3487 aa10.57□□□□□ -0.72
CEACAM1-206ENST00000403136 A0A0U1RQK1 487 aa10.57□□□□□ -0.72
CEACAM1-206ENST00000403136 APELAP0DMC3 54 aa10.57□□□□□ -0.72
CEACAM1-206ENST00000403136 CX3CL1P78423 397 aa10.57□□□□□ -0.72
CEACAM1-206ENST00000403136 AKR1C1Q04828 323 aa10.57□□□□□ -0.72
CEACAM1-206ENST00000403136 KLF17Q5JT82 389 aaPredicted RBP10.57□□□□□ -0.72
CEACAM1-206ENST00000403136 FFAR4Q5NUL3 377 aa10.57□□□□□ -0.72
CEACAM1-206ENST00000403136 SPSB3Q6PJ21 355 aa10.57□□□□□ -0.72
CEACAM1-206ENST00000403136 TMEM144Q7Z5S9 345 aa10.57□□□□□ -0.72
CEACAM1-206ENST00000403136 KRTAP1-3Q8IUG1 177 aa10.57□□□□□ -0.72
CEACAM1-206ENST00000403136 COMMD1Q8N668 190 aa10.57□□□□□ -0.72
CEACAM1-206ENST00000403136 OR1P1Q8NH06 330 aa10.57□□□□□ -0.72
CEACAM1-206ENST00000403136 SFT2D1Q8WV19 159 aa10.57□□□□□ -0.72
CEACAM1-206ENST00000403136 Q96MF0 132 aa10.57□□□□□ -0.72
CEACAM1-206ENST00000403136 MGST2Q99735 147 aa10.57□□□□□ -0.72
CEACAM1-206ENST00000403136 APCP25054 2843 aa10.57□□□□□ -0.72
CEACAM1-206ENST00000403136 SVEP1Q4LDE5 3571 aa10.56□□□□□ -0.72
CEACAM1-206ENST00000403136 J3QLI3 93 aa10.56□□□□□ -0.72
CEACAM1-206ENST00000403136 SOX15O60248 233 aa10.56□□□□□ -0.72
CEACAM1-206ENST00000403136 OPRK1P41145 380 aa10.56□□□□□ -0.72
CEACAM1-206ENST00000403136 RAB31Q13636 194 aa10.56□□□□□ -0.72
CEACAM1-206ENST00000403136 TOR2AQ5JU69 321 aa10.56□□□□□ -0.72
CEACAM1-206ENST00000403136 RPP25LQ8N5L8 163 aaKnown RBP10.56□□□□□ -0.72
CEACAM1-206ENST00000403136 Q8N9W7 124 aa10.56□□□□□ -0.72
CEACAM1-206ENST00000403136 MBD3L1Q8WWY6 194 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms