RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 AVPP01185 164 aa13.67□□□□□ -0.22
FRMD4A-202ENST00000342409 IGHV1-69P01742 117 aa13.67□□□□□ -0.22
FRMD4A-202ENST00000342409 IGHV4-38-2P0DP08 117 aa13.67□□□□□ -0.22
FRMD4A-202ENST00000342409 FGF7P21781 194 aa13.67□□□□□ -0.22
FRMD4A-202ENST00000342409 MAS1LP35410 378 aa13.67□□□□□ -0.22
FRMD4A-202ENST00000342409 RPL27AP46776 148 aaKnown RBP13.67□□□□□ -0.22
FRMD4A-202ENST00000342409 RAB5CP51148 216 aa13.67□□□□□ -0.22
FRMD4A-202ENST00000342409 BLOC1S1P78537 153 aa13.67□□□□□ -0.22
FRMD4A-202ENST00000342409 MBD6Q96DN6 1003 aa13.67□□□□□ -0.22
FRMD4A-202ENST00000342409 ITPR3Q14573 2671 aa13.67□□□□□ -0.22
FRMD4A-202ENST00000342409 A0A1W2PN81 502 aa13.67□□□□□ -0.22
FRMD4A-202ENST00000342409 UMAD1C9J7I0 102 aa13.67□□□□□ -0.22
FRMD4A-202ENST00000342409 CHRNA7P36544 502 aa13.67□□□□□ -0.22
FRMD4A-202ENST00000342409 CAMLGP49069 296 aa13.67□□□□□ -0.22
FRMD4A-202ENST00000342409 TREML4Q6UXN2 200 aa13.67□□□□□ -0.22
FRMD4A-202ENST00000342409 MAPK1IP1LQ8NDC0 245 aa13.67□□□□□ -0.22
FRMD4A-202ENST00000342409 FAM213BQ8TBF2 198 aa13.67□□□□□ -0.22
FRMD4A-202ENST00000342409 P2RX4Q99571 388 aa13.67□□□□□ -0.22
FRMD4A-202ENST00000342409 HRH4Q9H3N8 390 aa13.67□□□□□ -0.22
FRMD4A-202ENST00000342409 TIMM9Q9Y5J7 89 aa13.67□□□□□ -0.22
FRMD4A-202ENST00000342409 ZNF469Q96JG9 3925 aaPredicted RBP13.66□□□□□ -0.22
FRMD4A-202ENST00000342409 TRAV40A0A0B4J280 105 aa13.66□□□□□ -0.22
FRMD4A-202ENST00000342409 OR13C7P0DN81 318 aa13.66□□□□□ -0.22
FRMD4A-202ENST00000342409 AREGP15514 252 aa13.66□□□□□ -0.22
FRMD4A-202ENST00000342409 ATP5IP56385 69 aaPredicted RBP13.66□□□□□ -0.22
FRMD4A-202ENST00000342409 LOXL1Q08397 574 aaPredicted RBP13.66□□□□□ -0.22
FRMD4A-202ENST00000342409 HES1Q14469 280 aa13.66□□□□□ -0.22
FRMD4A-202ENST00000342409 Q5PR19 223 aa13.66□□□□□ -0.22
FRMD4A-202ENST00000342409 ACSM6Q6P461 480 aa13.66□□□□□ -0.22
FRMD4A-202ENST00000342409 MARC2Q969Z3 335 aa13.66□□□□□ -0.22
FRMD4A-202ENST00000342409 NPCDR1Q9BY65 106 aa13.66□□□□□ -0.22
FRMD4A-202ENST00000342409 HIF1ANQ9NWT6 349 aa13.66□□□□□ -0.22
FRMD4A-202ENST00000342409 TEX15Q9BXT5 2789 aa13.66□□□□□ -0.22
FRMD4A-202ENST00000342409 UNC79Q9P2D8 2635 aa13.65□□□□□ -0.22
FRMD4A-202ENST00000342409 RNF223E7ERA6 249 aa13.65□□□□□ -0.22
FRMD4A-202ENST00000342409 PRH1P02810 166 aa13.65□□□□□ -0.22
FRMD4A-202ENST00000342409 REG1AP05451 166 aa13.65□□□□□ -0.22
FRMD4A-202ENST00000342409 MFAP2P55001 183 aa13.65□□□□□ -0.22
FRMD4A-202ENST00000342409 GNB1P62873 340 aa13.65□□□□□ -0.22
FRMD4A-202ENST00000342409 ERHP84090 104 aaKnown RBP13.65□□□□□ -0.22
FRMD4A-202ENST00000342409 MLANAQ16655 118 aa13.65□□□□□ -0.22
FRMD4A-202ENST00000342409 C5orf64Q2M2E5 130 aa13.65□□□□□ -0.22
FRMD4A-202ENST00000342409 KLF17Q5JT82 389 aaPredicted RBP13.65□□□□□ -0.22
FRMD4A-202ENST00000342409 PVRIGQ6DKI7 326 aa13.65□□□□□ -0.22
FRMD4A-202ENST00000342409 BRD3OSQ6XYD6 125 aa13.65□□□□□ -0.22
FRMD4A-202ENST00000342409 C19orf35Q6ZS72 473 aa13.65□□□□□ -0.22
FRMD4A-202ENST00000342409 C7orf69Q9H7B7 122 aa13.65□□□□□ -0.22
FRMD4A-202ENST00000342409 RPRMQ9NS64 109 aa13.65□□□□□ -0.22
FRMD4A-202ENST00000342409 LSM4Q9Y4Z0 139 aaKnown RBP13.65□□□□□ -0.22
FRMD4A-202ENST00000342409 SOX21Q9Y651 276 aaPredicted RBP13.65□□□□□ -0.22
FRMD4A-202ENST00000342409 TRAV20A0A0B4J274 112 aa13.64□□□□□ -0.23
FRMD4A-202ENST00000342409 SRSF3P84103 164 aaKnown RBP13.64□□□□□ -0.23
FRMD4A-202ENST00000342409 TOR2AQ5JU69 321 aa13.64□□□□□ -0.23
FRMD4A-202ENST00000342409 SPSB3Q6PJ21 355 aa13.64□□□□□ -0.23
FRMD4A-202ENST00000342409 LINC01356Q8N9X3 169 aa13.64□□□□□ -0.23
FRMD4A-202ENST00000342409 SRSF12Q8WXF0 261 aaKnown RBP13.64□□□□□ -0.23
FRMD4A-202ENST00000342409 MGST2Q99735 147 aa13.64□□□□□ -0.23
FRMD4A-202ENST00000342409 CREBBPQ92793 2442 aa13.64□□□□□ -0.23
FRMD4A-202ENST00000342409 I3L521 148 aa13.64□□□□□ -0.23
FRMD4A-202ENST00000342409 APELAP0DMC3 54 aa13.64□□□□□ -0.23
FRMD4A-202ENST00000342409 SNCAP37840 140 aa13.64□□□□□ -0.23
FRMD4A-202ENST00000342409 SERF2P84101 59 aa13.64□□□□□ -0.23
FRMD4A-202ENST00000342409 ZNF616Q08AN1 781 aa13.64□□□□□ -0.23
FRMD4A-202ENST00000342409 PLGLAQ15195 96 aa13.64□□□□□ -0.23
FRMD4A-202ENST00000342409 ZNF726P1Q15940 193 aa13.64□□□□□ -0.23
FRMD4A-202ENST00000342409 AKR1C8PQ5T2L2 129 aa13.64□□□□□ -0.23
FRMD4A-202ENST00000342409 SSX7Q7RTT5 188 aa13.64□□□□□ -0.23
FRMD4A-202ENST00000342409 SCRT1Q9BWW7 348 aa13.64□□□□□ -0.23
FRMD4A-202ENST00000342409 SMCO3A2RU48 225 aa13.63□□□□□ -0.23
FRMD4A-202ENST00000342409 RAB19A4D1S5 217 aa13.63□□□□□ -0.23
FRMD4A-202ENST00000342409 FNDC10F2Z333 226 aa13.63□□□□□ -0.23
FRMD4A-202ENST00000342409 ACTL6BO94805 426 aa13.63□□□□□ -0.23
FRMD4A-202ENST00000342409 TMEM11P17152 192 aa13.63□□□□□ -0.23
FRMD4A-202ENST00000342409 IL34Q6ZMJ4 242 aa13.63□□□□□ -0.23
FRMD4A-202ENST00000342409 ZNF114Q8NC26 417 aa13.63□□□□□ -0.23
FRMD4A-202ENST00000342409 FNDC4Q9H6D8 234 aaPredicted RBP13.63□□□□□ -0.23
FRMD4A-202ENST00000342409 KIAA1456Q9P272 454 aa13.63□□□□□ -0.23
FRMD4A-202ENST00000342409 DMRT1Q9Y5R6 373 aa13.63□□□□□ -0.23
FRMD4A-202ENST00000342409 A0A0U1RQK1 487 aa13.62□□□□□ -0.23
FRMD4A-202ENST00000342409 ELLP55199 621 aaPredicted RBP13.62□□□□□ -0.23
FRMD4A-202ENST00000342409 RAB2AP61019 212 aa13.62□□□□□ -0.23
FRMD4A-202ENST00000342409 CCL20P78556 96 aa13.62□□□□□ -0.23
FRMD4A-202ENST00000342409 CD69Q07108 199 aa13.62□□□□□ -0.23
FRMD4A-202ENST00000342409 Q8N9W7 124 aa13.62□□□□□ -0.23
FRMD4A-202ENST00000342409 PIFOQ8TCI5 191 aa13.62□□□□□ -0.23
FRMD4A-202ENST00000342409 NPVFQ9HCQ7 196 aa13.62□□□□□ -0.23
FRMD4A-202ENST00000342409 IGKV1OR2-108A0A075B7D4 117 aa13.61□□□□□ -0.23
FRMD4A-202ENST00000342409 IGHV4-31P0DP07 118 aa13.61□□□□□ -0.23
FRMD4A-202ENST00000342409 NDPQ00604 133 aa13.61□□□□□ -0.23
FRMD4A-202ENST00000342409 GAMTQ14353 236 aa13.61□□□□□ -0.23
FRMD4A-202ENST00000342409 DPPA3Q6W0C5 159 aa13.61□□□□□ -0.23
FRMD4A-202ENST00000342409 LINC00052Q96N35 136 aa13.61□□□□□ -0.23
FRMD4A-202ENST00000342409 GGTLC1Q9BX51 225 aa13.61□□□□□ -0.23
FRMD4A-202ENST00000342409 CCDC168Q8NDH2 2452 aa13.61□□□□□ -0.23
FRMD4A-202ENST00000342409 NUDT19A8MXV4 375 aa13.61□□□□□ -0.23
FRMD4A-202ENST00000342409 AGPAT2O15120 278 aa13.61□□□□□ -0.23
FRMD4A-202ENST00000342409 MPDU1O75352 247 aa13.61□□□□□ -0.23
FRMD4A-202ENST00000342409 GATA3P23771 443 aa13.61□□□□□ -0.23
FRMD4A-202ENST00000342409 BRS3P32247 399 aa13.61□□□□□ -0.23
FRMD4A-202ENST00000342409 TMEM41BQ5BJD5 291 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms