RNA–Protein interactions for RNA: ENST00000338700.9

TRIM2-201, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 6,735 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-201ENST00000338700 ICAM4Q14773 271 aa6.48□□□□□ -1.37
TRIM2-201ENST00000338700 WBP1Q96G27 269 aa6.48□□□□□ -1.37
TRIM2-201ENST00000338700 MRPL18Q9H0U6 180 aaKnown RBP6.48□□□□□ -1.37
TRIM2-201ENST00000338700 RALGAPA1Q6GYQ0 2036 aa6.48□□□□□ -1.37
TRIM2-201ENST00000338700 TMEM262E9PQX1 116 aa6.48□□□□□ -1.37
TRIM2-201ENST00000338700 YPEL1O60688 119 aa6.48□□□□□ -1.37
TRIM2-201ENST00000338700 SCGB1A1P11684 91 aa6.48□□□□□ -1.37
TRIM2-201ENST00000338700 PIP4P1Q86T03 277 aa6.48□□□□□ -1.37
TRIM2-201ENST00000338700 YPEL2Q96QA6 119 aa6.48□□□□□ -1.37
TRIM2-201ENST00000338700 DANCRP0C864 163 aa6.48□□□□□ -1.37
TRIM2-201ENST00000338700 LGALS3P17931 250 aaKnown RBP6.48□□□□□ -1.37
TRIM2-201ENST00000338700 CIRBPQ14011 172 aaKnown RBP6.48□□□□□ -1.37
TRIM2-201ENST00000338700 PAPPA-AS1Q5QFB9 102 aa6.48□□□□□ -1.37
TRIM2-201ENST00000338700 TMEM133Q9H2Q1 129 aa6.48□□□□□ -1.37
TRIM2-201ENST00000338700 CKAP5Q14008 2032 aa6.48□□□□□ -1.37
TRIM2-201ENST00000338700 IGHV3OR16-13A0A075B7E8 117 aa6.48□□□□□ -1.37
TRIM2-201ENST00000338700 IGHV3-74A0A0B4J1X5 117 aa6.48□□□□□ -1.37
TRIM2-201ENST00000338700 KLK2P20151 261 aa6.48□□□□□ -1.37
TRIM2-201ENST00000338700 ASIPP42127 132 aa6.48□□□□□ -1.37
TRIM2-201ENST00000338700 PUSL1Q8N0Z8 303 aaKnown RBP6.48□□□□□ -1.37
TRIM2-201ENST00000338700 DUX3Q96PT4 197 aa6.48□□□□□ -1.37
TRIM2-201ENST00000338700 NYNRINQ9P2P1 1898 aaKnown RBP6.48□□□□□ -1.37
TRIM2-201ENST00000338700 MYOD1P15172 320 aa6.48□□□□□ -1.37
TRIM2-201ENST00000338700 CA7P43166 264 aa6.48□□□□□ -1.37
TRIM2-201ENST00000338700 WDR82Q6UXN9 313 aa6.48□□□□□ -1.37
TRIM2-201ENST00000338700 TMEM101Q96IK0 257 aa6.48□□□□□ -1.37
TRIM2-201ENST00000338700 NPCDR1Q9BY65 106 aa6.48□□□□□ -1.37
TRIM2-201ENST00000338700 WNT10AQ9GZT5 417 aa6.48□□□□□ -1.37
TRIM2-201ENST00000338700 S4R3C0 116 aa6.48□□□□□ -1.37
TRIM2-201ENST00000338700 NLRC5Q86WI3 1866 aa6.48□□□□□ -1.37
TRIM2-201ENST00000338700 COL4A6Q14031 1691 aa6.48□□□□□ -1.37
TRIM2-201ENST00000338700 TRBV9A0A0B4J1U6 114 aa6.47□□□□□ -1.37
TRIM2-201ENST00000338700 A0A1B0GTI1 187 aa6.47□□□□□ -1.37
TRIM2-201ENST00000338700 TBX6O95947 436 aaPredicted RBP6.47□□□□□ -1.37
TRIM2-201ENST00000338700 HLA-DRB1P01911 266 aa6.47□□□□□ -1.37
TRIM2-201ENST00000338700 COX6CP09669 75 aa6.47□□□□□ -1.37
TRIM2-201ENST00000338700 CACNG8Q8WXS5 425 aa6.47□□□□□ -1.37
TRIM2-201ENST00000338700 RARRES2Q99969 163 aa6.47□□□□□ -1.37
TRIM2-201ENST00000338700 MEGF9Q9H1U4 602 aa6.47□□□□□ -1.37
TRIM2-201ENST00000338700 PROB1E7EW31 1015 aa6.47□□□□□ -1.37
TRIM2-201ENST00000338700 UCP1P25874 307 aa6.47□□□□□ -1.37
TRIM2-201ENST00000338700 H2BFSP57053 126 aa6.47□□□□□ -1.37
TRIM2-201ENST00000338700 C12orf54Q6X4T0 127 aa6.47□□□□□ -1.37
TRIM2-201ENST00000338700 OR1P1Q8NH06 330 aa6.47□□□□□ -1.37
TRIM2-201ENST00000338700 NEU1Q99519 415 aa6.47□□□□□ -1.37
TRIM2-201ENST00000338700 IGHV3-49A0A0A0MS15 119 aa6.47□□□□□ -1.37
TRIM2-201ENST00000338700 RRHO14718 337 aa6.47□□□□□ -1.37
TRIM2-201ENST00000338700 NBEAP1P0C6P0 100 aa6.47□□□□□ -1.37
TRIM2-201ENST00000338700 CCL3L1P16619 93 aa6.47□□□□□ -1.37
TRIM2-201ENST00000338700 IGFBP3P17936 291 aaPredicted RBP6.47□□□□□ -1.37
TRIM2-201ENST00000338700 AGAP20933 346 aa6.47□□□□□ -1.37
TRIM2-201ENST00000338700 C2orf68Q2NKX9 166 aa6.47□□□□□ -1.37
TRIM2-201ENST00000338700 MBNL2Q5VZF2 373 aaKnown RBP6.47□□□□□ -1.37
TRIM2-201ENST00000338700 PLPPR1Q8TBJ4 325 aa6.47□□□□□ -1.37
TRIM2-201ENST00000338700 GEMIN7Q9H840 131 aaKnown RBP6.47□□□□□ -1.37
TRIM2-201ENST00000338700 A6NNC1 897 aa6.47□□□□□ -1.37
TRIM2-201ENST00000338700 GREB1Q4ZG55 1949 aa6.47□□□□□ -1.37
TRIM2-201ENST00000338700 SAA2-SAA4A0A096LPE2 208 aa6.47□□□□□ -1.37
TRIM2-201ENST00000338700 MSGN1A6NI15 193 aa6.47□□□□□ -1.37
TRIM2-201ENST00000338700 C9JCJ5 164 aa6.47□□□□□ -1.37
TRIM2-201ENST00000338700 TRGC2P03986 189 aa6.47□□□□□ -1.37
TRIM2-201ENST00000338700 SAA2P0DJI9 122 aaPredicted RBP6.47□□□□□ -1.37
TRIM2-201ENST00000338700 PAX1P15863 534 aa6.47□□□□□ -1.37
TRIM2-201ENST00000338700 IGFBP2P18065 325 aa6.47□□□□□ -1.37
TRIM2-201ENST00000338700 SFRP2Q96HF1 295 aa6.47□□□□□ -1.37
TRIM2-201ENST00000338700 PLSCR4Q9NRQ2 329 aa6.47□□□□□ -1.37
TRIM2-201ENST00000338700 TNFRSF18Q9Y5U5 241 aa6.47□□□□□ -1.37
TRIM2-201ENST00000338700 RBFOX2O43251 390 aaKnown RBP eCLIP6.47□□□□□ -1.37
TRIM2-201ENST00000338700 NPIPB7O75200 414 aa6.47□□□□□ -1.37
TRIM2-201ENST00000338700 LEPROTL1O95214 131 aa6.47□□□□□ -1.37
TRIM2-201ENST00000338700 NMBP08949 121 aa6.47□□□□□ -1.37
TRIM2-201ENST00000338700 LDLRAD2Q5SZI1 272 aa6.47□□□□□ -1.37
TRIM2-201ENST00000338700 C20orf204Q6ZNR8 217 aa6.47□□□□□ -1.37
TRIM2-201ENST00000338700 SGK494Q96LW2 274 aa6.47□□□□□ -1.37
TRIM2-201ENST00000338700 ZNF48Q96MX3 618 aaPredicted RBP6.47□□□□□ -1.37
TRIM2-201ENST00000338700 PARLQ9H300 379 aa6.47□□□□□ -1.37
TRIM2-201ENST00000338700 TSPAN13O95857 204 aa6.46□□□□□ -1.37
TRIM2-201ENST00000338700 PPP1R17O96001 155 aa6.46□□□□□ -1.37
TRIM2-201ENST00000338700 MDKP21741 143 aaPredicted RBP6.46□□□□□ -1.37
TRIM2-201ENST00000338700 CCL1P22362 96 aa6.46□□□□□ -1.37
TRIM2-201ENST00000338700 GPX4P36969 197 aaPredicted RBP6.46□□□□□ -1.37
TRIM2-201ENST00000338700 CENPWQ5EE01 88 aa6.46□□□□□ -1.37
TRIM2-201ENST00000338700 ZNF497Q6ZNH5 498 aa6.46□□□□□ -1.37
TRIM2-201ENST00000338700 C17orf82Q86X59 251 aaPredicted RBP6.46□□□□□ -1.37
TRIM2-201ENST00000338700 OR10AG1Q8NH19 301 aa6.46□□□□□ -1.37
TRIM2-201ENST00000338700 HSPB9Q9BQS6 159 aa6.46□□□□□ -1.37
TRIM2-201ENST00000338700 DOCK6Q96HP0 2047 aa6.46□□□□□ -1.38
TRIM2-201ENST00000338700 IGKV3OR2-268A0A0C4DH90 116 aa6.46□□□□□ -1.38
TRIM2-201ENST00000338700 UPK2O00526 184 aa6.46□□□□□ -1.38
TRIM2-201ENST00000338700 CD8AP01732 235 aa6.46□□□□□ -1.38
TRIM2-201ENST00000338700 LINC00614P0C842 121 aa6.46□□□□□ -1.38
TRIM2-201ENST00000338700 LAIR2Q6ISS4 152 aa6.46□□□□□ -1.38
TRIM2-201ENST00000338700 FMC1Q96HJ9 113 aa6.46□□□□□ -1.38
TRIM2-201ENST00000338700 PRO3102Q9H379 93 aa6.46□□□□□ -1.38
TRIM2-201ENST00000338700 MRPS16Q9Y3D3 137 aaKnown RBP6.46□□□□□ -1.38
TRIM2-201ENST00000338700 TRBV20OR9-2A0A075B6H5 130 aa6.46□□□□□ -1.38
TRIM2-201ENST00000338700 TRBV6-7A0A0A0MS04 114 aa6.46□□□□□ -1.38
TRIM2-201ENST00000338700 IGHV1-46P01743 117 aa6.46□□□□□ -1.38
TRIM2-201ENST00000338700 SAA1P0DJI8 122 aaPredicted RBP6.46□□□□□ -1.38
TRIM2-201ENST00000338700 LINC01587Q99440 93 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms